4.0:Analysis result:Information of module
sfr3 cold

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0072593
reactive oxygen species metabolic proces...
BP1.365e-03AT5G21090 AT5G08390 PPO ATCHIA PETC AtMYB51 CAT1 ALDH5F1 PKDM7D AMT2 ATGPA1
GO:0042743
hydrogen peroxide metabolic process
BP6.063e-03AT5G21090 AT5G08390 PPO ATCHIA PETC AtMYB51 CAT1 PKDM7D AMT2
GO:0050665
hydrogen peroxide biosynthetic process
BP7.274e-03AT5G08390 PPO ATCHIA PKDM7D
GO:0009749
response to glucose
BP7.907e-03IDH-V UXS5 AMT2 ATGPA1
GO:0009750
response to fructose
BP8.262e-03AtSWEET17 IDH-V UXS5 AMT2 ATGPA1
GO:0016926
protein desumoylation
BP8.576e-03AT5G08390 PPO ATCHIA PKDM7D
GO:1903409
reactive oxygen species biosynthetic pro...
BP8.576e-03AT5G08390 PPO ATCHIA PKDM7D
GO:0070646
protein modification by small protein re...
BP8.976e-03AT5G08390 EIF2 PPO ATCHIA ATUBP6 PKDM7D
GO:0042537
benzene-containing compound metabolic pr...
BP1.520e-02RHF2A AT5G19440 AT1G16670 PETC AtMYB51 AT3G04000 ATSAGT1 AMT2
GO:0048584
positive regulation of response to stimu...
BP1.527e-02RIN2 ATB MKS1 ATGPA1
GO:0009789
positive regulation of abscisic acid-act...
BP1.673e-02ATB ATGPA1
GO:0051651
maintenance of location in cell
BP1.673e-02POD1 AT1G75760
GO:0009746
response to hexose
BP1.679e-02AtSWEET17 IDH-V UXS5 AMT2 ATGPA1
GO:0034284
response to monosaccharide
BP1.848e-02AtSWEET17 IDH-V UXS5 AMT2 ATGPA1
GO:0006995
cellular response to nitrogen starvation
BP1.983e-02CAT1 AMT2
GO:1901421
positive regulation of response to alcoh...
BP1.983e-02ATB ATGPA1
GO:0015698
inorganic anion transport
BP2.100e-02AAP3 AT5G44380 ATPT4 AT5G07080 AT3G47040 ATSAGT1 AMT2
GO:0018958
phenol-containing compound metabolic pro...
BP2.312e-02RHF2A AT1G16670 PETC AtMYB51 ATSAGT1 AHA10 AMT2
GO:0006536
glutamate metabolic process
BP2.315e-02DELTA-OAT ALDH5F1
GO:0046482
para-aminobenzoic acid metabolic process
BP2.436e-02AT5G19440 AT3G04000 ATSAGT1
GO:0051049
regulation of transport
BP2.527e-02AAP3 POD1 CIPK9 AT1G75760 AMT2
GO:0098771
inorganic ion homeostasis
BP2.734e-02ATGLR2.4 CIPK9 AHA10 ATGLR2.8
GO:0010118
stomatal movement
BP3.040e-02NLP7 ATB ATGPA1
GO:0006874
cellular calcium ion homeostasis
BP3.043e-02ATGLR2.4 ATGLR2.8
GO:0009065
glutamine family amino acid catabolic pr...
BP3.043e-02DELTA-OAT ALDH5F1
GO:0044265
cellular macromolecule catabolic process
BP3.071e-02RHF2A ARIA RPT4A ATSNX1 IDH-V AT3G61790 nPAP ATB ATUBP6 ATDCP1 ASK19 ATOEP16-3
GO:0010167
response to nitrate
BP3.099e-02AT5G44380 AT5G07080 AT3G47040 NLP7 ATSAGT1
GO:0048522
positive regulation of cellular process
BP3.333e-02AT5G08390 OBP3 ATBZIP25 AT4G31270 RIN2 ATB ATUBP6 FUS3 AT2G43500 PKDM7D ATGPA1
GO:0070647
protein modification by small protein co...
BP3.431e-02AT5G08390 EIF2 PPO ATCHIA AT3G61790 ATUBP6 PKDM7D ASK19
GO:0043687
post-translational protein modification
BP3.482e-02AT4G31270 AT2G43500 PKDM7D
GO:0055074
calcium ion homeostasis
BP3.848e-02ATGLR2.4 ATGLR2.8
GO:0043248
proteasome assembly
BP4.171e-02RPT4A ATSNX1 IDH-V ATB ATOEP16-3
GO:0051788
response to misfolded protein
BP4.171e-02RPT4A ATSNX1 IDH-V ATB ATOEP16-3
GO:0035966
response to topologically incorrect prot...
BP4.260e-02AT1G16670 RPT4A ATSNX1 IDH-V ATBZIP25 ATB AMT2 ATOEP16-3
GO:0009967
positive regulation of signal transducti...
BP4.277e-02ATB ATGPA1
GO:0023056
positive regulation of signaling
BP4.277e-02ATB ATGPA1
GO:0043562
cellular response to nitrogen levels
BP4.277e-02CAT1 AMT2
GO:0009057
macromolecule catabolic process
BP4.388e-02RHF2A ARIA RPT4A ATSNX1 IDH-V AT3G61790 nPAP ATB ATUBP6 ATDCP1 ASK19 ATOEP16-3
GO:0046189
phenol-containing compound biosynthetic ...
BP4.631e-02RHF2A AT1G16670 PETC AtMYB51 AHA10 AMT2
GO:0043623
cellular protein complex assembly
BP4.654e-02AT5G08390 AT4G37190 RPT4A ATSNX1 IDH-V AT4G33480 PETC ATB ATOEP16-3
GO:0009696
salicylic acid metabolic process
BP4.764e-02RHF2A AT1G16670 PETC AtMYB51 ATSAGT1 AMT2
GO:0006511
ubiquitin-dependent protein catabolic pr...
BP4.880e-02RPT4A ATSNX1 IDH-V AT3G61790 ATB ATUBP6 ASK19 ATOEP16-3
GO:0032879
regulation of localization
BP4.942e-02AAP3 POD1 CIPK9 AT1G75760 AMT2
GO:0019941
modification-dependent protein catabolic...
BP5.099e-02RPT4A ATSNX1 IDH-V AT3G61790 ATB ATUBP6 ASK19 ATOEP16-3
GO:0043632
modification-dependent macromolecule cat...
BP5.099e-02RPT4A ATSNX1 IDH-V AT3G61790 ATB ATUBP6 ASK19 ATOEP16-3
GO:0006814
sodium ion transport
BP5.186e-02ATKEA5 ATNHD1
GO:0015696
ammonium transport
BP5.186e-02AAP3 AMT2
GO:0015802
basic amino acid transport
BP5.186e-02AAP3 AMT2
GO:0048544
recognition of pollen
BP5.186e-02AT5G03700 SD1-29
GO:0006820
anion transport
BP5.262e-02AT1G28250 AAP3 AT5G44380 ATPT4 AT5G07080 ATPROT2 AT3G47040 AT1G51820 ATNHD1 ATSAGT1 AMT2
GO:0006812
cation transport
BP5.518e-02AT1G28250 AAP3 AT5G26280 ATKEA5 BGLU16 ATPROT2 AT3G47040 AT1G51820 ATNHD1 CIPK9 AHA10 AMT2
GO:0008037
cell recognition
BP5.664e-02AT5G03700 SD1-29
GO:0009875
pollen-pistil interaction
BP5.664e-02AT5G03700 SD1-29
GO:0010647
positive regulation of cell communicatio...
BP5.664e-02ATB ATGPA1
GO:0051603
proteolysis involved in cellular protein...
BP5.786e-02RHF2A RPT4A ATSNX1 IDH-V AT3G61790 ATB ATUBP6 ASK19 ATOEP16-3
GO:0007154
cell communication
BP5.801e-02RHF2A AT5G21090 AT1G16670 ENY ATEXO70B1 ATCHIA ATSNX1 AT5G03700 ABCB21 ATBZIP25 AT3G47040 AT4G36140 ATMSRB3 PETC ATB AtMYB51 ATRLP40 MKS1 CAT1 CLE12 CIPK9 SD1-29 AT2G19650 JAZ7 AMT2 ATGPA1 ATHO1
GO:0009624
response to nematode
BP5.851e-02ATGLR2.4 ATSUC1 AMT2
GO:0055065
metal ion homeostasis
BP5.851e-02ATGLR2.4 CIPK9 ATGLR2.8
GO:0080147
root hair cell development
BP6.030e-02IDH-V AT4G02370 AT1G78620 XEG113
GO:0009825
multidimensional cell growth
BP6.157e-02ATEXP16 XET
GO:0010119
regulation of stomatal movement
BP6.157e-02ATB ATGPA1
GO:0045089
positive regulation of innate immune res...
BP6.157e-02RIN2 MKS1
GO:0072503
cellular divalent inorganic cation homeo...
BP6.664e-02ATGLR2.4 ATGLR2.8
GO:0009314
response to radiation
BP6.733e-02EIF2 ATCHIA OBP3 PHS1 AT4G38780 ATGLR2.4 PETC ATB ATSWI3B ATUBP6 CAT1 ALDH5F1 ATGLR2.8 ATGPA1 ATHO1
GO:0034622
cellular macromolecular complex assembly
BP6.960e-02AT5G08390 AT4G37190 RPT4A ATSNX1 IDH-V AT4G33480 PETC ATB ATOEP16-3
GO:0044257
cellular protein catabolic process
BP6.960e-02RHF2A RPT4A ATSNX1 IDH-V AT3G61790 ATB ATUBP6 ASK19 ATOEP16-3
GO:0009966
regulation of signal transduction
BP6.960e-02ENY ABCB21 ATB ATGPA1
GO:0015824
proline transport
BP7.095e-02AT1G28250 ATPROT2 AT1G51820
GO:0002684
positive regulation of immune system pro...
BP7.184e-02RIN2 MKS1
GO:0050778
positive regulation of immune response
BP7.184e-02RIN2 MKS1
GO:0023051
regulation of signaling
BP7.204e-02ENY ABCB21 ATB ATGPA1
GO:0001101
response to acid chemical
BP7.342e-02ARIA AT1G16670 ENY ATEXO70B1 AT5G44380 ATCHIA AT5G07080 AT3G47040 CRK4 NLP7 ATMSRB3 PETC ATB AtMYB51 CAT1 ATSAGT1 ATGSTU7 JAZ7 AMT2 ATGPA1
GO:0015804
neutral amino acid transport
BP7.423e-02AT1G28250 ATPROT2 AT1G51820
GO:0050896
response to stimulus
BP7.537e-02AtSWEET17 RHF2A AT5G21090 ARIA EIF2 AT1G16670 AAP3 ENY ATEXO70B1 AT5G51830 DELTA-OAT AT5G44380 RPT4A ATCHIA ATRAD4 AT5G07080 ATSNX1 IDH-V ABCB21 BGLU16 OBP3 ATBZIP25 PHS1 AT3G47040 UXS5 CRK4 AT4G38780 AT4G36140 ATGLR2.4 RIN2 NLP7 HAP6 ATMSRB3 PETC ATB AtMYB51 ATSWI3B ATUBP6 AT1G51820 ATRLP40 MKS1 FUS3 AT3G04000 CAT1 POD1 CLE12 AT1G63350 ATSUC1 ATSAGT1 CIPK9 ALDH5F1 ATGSTU16 AT1G54220 PKDM7D AT2G19650 AtPNP-A ATGSTU7 ATGLR2.8 JAZ7 MAKR4 AMT2 ATGPA1 ATHO1 ATOEP16-3
GO:0009416
response to light stimulus
BP7.619e-02EIF2 ATCHIA OBP3 PHS1 ATGLR2.4 PETC ATB ATSWI3B ATUBP6 CAT1 ALDH5F1 ATGLR2.8 ATGPA1 ATHO1
GO:0010646
regulation of cell communication
BP7.704e-02ENY ABCB21 ATB ATGPA1
GO:0009740
gibberellic acid mediated signaling path...
BP7.717e-02ENY ATGPA1
GO:0010476
gibberellin mediated signaling pathway
BP7.717e-02ENY ATGPA1
GO:0031349
positive regulation of defense response
BP7.717e-02RIN2 MKS1
GO:0048878
chemical homeostasis
BP7.729e-02ATSNX1 ATGLR2.4 CIPK9 AHA10 ATGLR2.8
GO:0010583
response to cyclopentenone
BP7.960e-02AT3G04000 ATGSTU16 ATGSTU7 MAKR4
GO:0051606
detection of stimulus
BP7.960e-02PETC AtMYB51 AMT2 ATHO1
GO:0030163
protein catabolic process
BP8.135e-02RHF2A RPT4A ATSNX1 IDH-V AT3G61790 ATB ATUBP6 ASK19 ATOEP16-3
GO:0009581
detection of external stimulus
BP8.262e-02AMT2 ATHO1
GO:0072507
divalent inorganic cation homeostasis
BP8.262e-02ATGLR2.4 ATGLR2.8
GO:0018193
peptidyl-amino acid modification
BP8.311e-02AT5G08390 ATFKBP12 PPO ATCHIA HAP6 PKDM7D
GO:1902578
single-organism localization
BP8.515e-02AtSWEET17 AT1G28250 RHF2A AT5G21090 AAP3 AT5G26280 ATEXO70B1 ATKEA5 AT5G44380 ATPT4 AT5G07080 ATSNX1 AT5G03700 ABCB21 BGLU16 ATPROT2 AT3G47040 nPAP ABCB9 PETC ATB AtMYB51 AT1G51820 ATNHD1 POD1 ATSUC1 ATSAGT1 CIPK9 SECA2 AHA10 AT1G62790 AT1G75760 AMT2
GO:0006810
transport
BP8.773e-02AtSWEET17 AT1G28250 RHF2A AT5G21090 AAP3 AT5G26280 ATEXO70B1 ATKEA5 AT5G44380 ATPT4 AT5G07080 ATSNX1 AT5G03700 ABCB21 BGLU16 ATPROT2 AT3G47040 nPAP ATGLR2.4 ABCB9 PETC ATB AtMYB51 AT1G51820 ATNHD1 POD1 ATSUC1 ATSAGT1 CIPK9 SECA2 AHA10 AT1G62790 AT1G75760 ATGLR2.8 AMT2 ATOEP16-3
GO:0009739
response to gibberellin
BP8.800e-02ENY AtMYB51 ATGPA1
GO:0043090
amino acid import
BP8.800e-02AAP3 ATPROT2 AMT2
GO:0019321
pentose metabolic process
BP8.818e-02AT5G51830 UXS5
GO:0032880
regulation of protein localization
BP8.818e-02POD1 AT1G75760
GO:0071370
cellular response to gibberellin stimulu...
BP8.818e-02ENY ATGPA1
GO:0006461
protein complex assembly
BP8.837e-02AT5G08390 AT4G37190 RPT4A ATSNX1 IDH-V AT4G33480 PETC ATB ATOEP16-3
GO:0044699
single-organism process
BP8.878e-02AtSWEET17 AT1G28250 RHF2A AT5G21090 AT5G19440 AT5G08390 ARIA EIF2 AT1G16670 AAP3 ATBCA6 BBM ATGMII AT5G26280 ENY ATFKBP12 PPO ATEXO70B1 AT5G53820 ATKEA5 AT5G51830 DELTA-OAT AT5G44380 ATPT4 ATCHIA AT5G23480 ATRAD4 AT5G07080 ATSNX1 AT5G03700 IDH-V ABCB21 AT3G61790 BGLU16 ATPROT2 ATEXP16 OBP3 ATBZIP25 PHS1 AT3G47040 UXS5 CRK4 DAYSLEEPER AT4G38780 AT4G36140 nPAP ATGLR2.4 RIN2 NLP7 HAP6 ABCB9 ATMSRB3 PETC AT4G02370 ATB AtMYB51 ATSWI3B ATUBP6 AT1G51820 AT3G28220 CYP71B35 ATRLP40 CYP71B24 MKS1 ATNHD1 FUS3 AT3G04000 CAT1 POD1 nMAT1 CLE12 ATSUC1 ATSAGT1 CIPK9 ATDCP1 EDA1 SECA2 AHA10 AT1G62790 ATMST2 ALDH5F1 ATGSTU16 AT1G54220 AT1G75760 AT1G78620 XET AT1G09130 SD1-29 PKDM7D XEG113 AT2G19650 AtPNP-A ATGSTU7 ATGLR2.8 JAZ7 AMT2 ATGPA1 ATHO1
GO:0032501
multicellular organismal process
BP8.954e-02RHF2A AT5G08390 ARIA EIF2 BBM ENY PPO AT5G53820 DELTA-OAT ATCHIA ATSNX1 AT5G03700 IDH-V AT3G61790 OBP3 ATBZIP25 DAYSLEEPER AT4G38780 AT4G02370 ATB ATSWI3B ATUBP6 FUS3 POD1 nMAT1 ATSUC1 EDA1 SECA2 ATMST2 AT1G78620 SD1-29 PKDM7D XEG113 ATGPA1 ATHO1
GO:0070271
protein complex biogenesis
BP8.982e-02AT5G08390 AT4G37190 RPT4A ATSNX1 IDH-V AT4G33480 PETC ATB ATOEP16-3
GO:0055080
cation homeostasis
BP9.028e-02ATGLR2.4 CIPK9 AHA10 ATGLR2.8
GO:0071214
cellular response to abiotic stimulus
BP9.028e-02ATCHIA ATMSRB3 ATGPA1 ATHO1
GO:0006396
RNA processing
BP9.046e-02ATFKBP12 AT4G38780 nPAP nMAT1 RPF3 ATDCP1 ATGPA1