GOID TERM ONTOLOGY pValue Genes GO:0043248 proteasome assembly BP 0.000859505331936244 RPT4A//PBB2//PAD1//AT4G02580//PBD1//cICDH//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:0051788 response to misfolded protein BP 0.000859505331936244 RPT4A//PBB2//PAD1//AT4G02580//PBD1//cICDH//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:0080167 response to karrikin BP 0.00108005152379573 WOX2//HY5//SDR1//KAI2//AMT1;1//AT2G23910//ELF4 GO:0043161 proteasome-mediated ubiquitin-dependent ... BP 0.0011338049158472 RPT4A//PBB2//PAD1//PBD1//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:0071577 zinc II ion transmembrane transport BP 0.00127213902299188 ATZIP9//AtZIP1//ZIP5 GO:0042221 response to chemical BP 0.00141922005557577 ATMYB12//AT5G20810//AT5G20080//AIP2//BETA//SHI//ATEXO70E2//ATNRT2.4//AT5G60160//AT5G53900//RPT4A//PBB2//CIR1//ATFTSH6//HY5//OBF4//ATMIPS3//ABCG22//FKD1//SDR1//RPL24//PAD1//LPPepsilon1//AtCYP71//KAI2//ATZIP9//AGL24//AMT1;1//RHA1B//AT4G02580//AT1G34010//PAC1//PBD1//AT3G21950//CYP71B22//AtZIP1//AT3G19950//AT3G23550//LTP6//POD1//JAZ9//AT1G69890//AT1G72430//AtMYB62//AT1G12180//AtRLP1//cICDH//NUZ//ATPAE1//AT1G47530//AT1G16210//CYP71B29//AT2G12900//AT1G79210//RPT5B//AT2G25530//AtTHP1//AT2G23910//AT2G32520//AGP17 GO:0048868 pollen tube development BP 0.00146794927041665 AT5G20810//ATNADP-ME3//AtSWEET8//ATIPK2A//LAP3//PIP5K4//BGAL11//RIC10//ATNAS4//POD1//AT2G34590 GO:0006508 proteolysis BP 0.00186687276230144 ATNADP-ME3//AT5G24820//AT5G60160//AT5G44530//RPT4A//PBB2//ATFTSH6//PAD1//UND//AT4G02580//ATUBP6//PAC1//PBD1//AT3G27110//PAE2//CPY//ATSBT1.1//cICDH//ATPAE1//AT1G16210//SCPL43//AT1G79210//RPT5B GO:0035966 response to topologically incorrect prot... BP 0.00261994457953325 RPT4A//PBB2//OBF4//PAD1//AT4G02580//PBD1//cICDH//ATPAE1//AT1G16210//AT2G12900//AT1G79210//RPT5B GO:0010043 response to zinc ion BP 0.00272122944916632 ATZIP9//AtZIP1//cICDH//AT2G32520 GO:0006829 zinc II ion transport BP 0.00288110227304508 ATZIP9//AtZIP1//ZIP5 GO:0016042 lipid catabolic process BP 0.00303034098852065 AT4G15520//ATHDA5//AT5G60160//PBB2//PAE2//AT3G09760//ATNR2//ATPAE1//RPT5B//ATPSAT1 GO:0009555 pollen development BP 0.00363876187199785 AtSWEET8//LAP3//UND//CRCK2//AT1G33430//MMD1//AT3G23770//ATNAS4//RPT5B//ATBARD1 GO:0006635 fatty acid beta-oxidation BP 0.00376869242217267 AT4G15520//ATHDA5//AT5G60160//PBB2//PAE2//AT3G09760//ATPAE1//RPT5B GO:0010498 proteasomal protein catabolic process BP 0.00389040833663998 ATNADP-ME3//RPT4A//PBB2//PAD1//PBD1//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:0019395 fatty acid oxidation BP 0.00420644489905295 AT4G15520//ATHDA5//AT5G60160//PBB2//PAE2//AT3G09760//ATPAE1//RPT5B GO:0080129 proteasome core complex assembly BP 0.00486013345661621 PBB2//PAD1//AT4G02580//PBD1//cICDH//AT1G79210//RPT5B GO:0006511 ubiquitin-dependent protein catabolic pr... BP 0.00508674103205776 RPT4A//PBB2//PAD1//AT4G02580//ATUBP6//PAC1//PBD1//PAE2//cICDH//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:0009856 pollination BP 0.00514020075550356 AT5G20810//ATNADP-ME3//AtSWEET8//ATIPK2A//LAP3//PIP5K4//BGAL11//RIC10//ATNAS4//POD1//AT2G34590 GO:0044706 multi-multicellular organism process BP 0.00514020075550356 AT5G20810//ATNADP-ME3//AtSWEET8//ATIPK2A//LAP3//PIP5K4//BGAL11//RIC10//ATNAS4//POD1//AT2G34590 GO:0019941 modification-dependent protein catabolic... BP 0.00543326159163059 RPT4A//PBB2//PAD1//AT4G02580//ATUBP6//PAC1//PBD1//PAE2//cICDH//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:0043632 modification-dependent macromolecule cat... BP 0.00543326159163059 RPT4A//PBB2//PAD1//AT4G02580//ATUBP6//PAC1//PBD1//PAE2//cICDH//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:0009860 pollen tube growth BP 0.00566766915995105 AT5G20810//ATNADP-ME3//AtSWEET8//ATIPK2A//LAP3//PIP5K4//BGAL11//RIC10//ATNAS4 GO:0034440 lipid oxidation BP 0.00636069759594295 AT4G15520//ATHDA5//AT5G60160//PBB2//PAE2//AT3G09760//ATPAE1//RPT5B GO:0010074 maintenance of meristem identity BP 0.00657085660535343 HY5//AtCYP71//AGL24//ATHAM1 GO:0030258 lipid modification BP 0.00676395512923362 AT4G15520//ATHDA5//AT5G60160//PBB2//PAE2//AT3G09760//ATPAE1//RPT5B//ATPSAT1 GO:0009932 cell tip growth BP 0.00710131587525272 AT5G20810//ATNADP-ME3//AtSWEET8//ATIPK2A//LAP3//PIP5K4//BGAL11//RIC10//ATNAS4//ATHAM1 GO:0044242 cellular lipid catabolic process BP 0.00736975326748125 AT4G15520//ATHDA5//AT5G60160//PBB2//PAE2//AT3G09760//ATNR2//ATPAE1//RPT5B GO:0010224 response to UV-B BP 0.00740241465171465 ATMYB12//HY5//SDR1//KAI2//AT2G25530//AT2G23910 GO:0044257 cellular protein catabolic process BP 0.00781994536310461 ATNADP-ME3//RPT4A//PBB2//ATFTSH6//PAD1//AT4G02580//ATUBP6//PAC1//PBD1//PAE2//cICDH//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:1901575 organic substance catabolic process BP 0.0079413663775092 AtBAM3//AT4G15520//AT5G20080//BETA//ATNADP-ME3//ATHDA5//AT5G60160//BAM8//RPT4A//PBB2//ATFTSH6//PAD1//BGAL11//PFK6//AT4G29570//AtPPT1//AT4G11570//AT4G02580//ATUBP6//PAC1//PBD1//PAE2//AT3G09760//AT1G68440//cICDH//ATNR2//ATPAE1//AT1G16210//ALDH6B2//AT1G79210//RPT5B//ATPSAT1//AT2G25530 GO:0000904 cell morphogenesis involved in different... BP 0.00803270370705731 AT5G20810//ATNADP-ME3//AtSWEET8//ATMYB23//ATIPK2A//LAP3//PIP5K4//AtCYP71//BGAL11//RIC10//ATNAS4//ATHAM1 GO:0009813 flavonoid biosynthetic process BP 0.00885565401895403 ATMYB12//HY5//SDR1//KAI2//AT3G19030//AT3G19010//AT2G25530//AT2G23910 GO:0051603 proteolysis involved in cellular protein... BP 0.00887922033109028 ATNADP-ME3//RPT4A//PBB2//PAD1//AT4G02580//ATUBP6//PAC1//PBD1//PAE2//cICDH//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:0030163 protein catabolic process BP 0.0107142854646661 ATNADP-ME3//RPT4A//PBB2//ATFTSH6//PAD1//AT4G02580//ATUBP6//PAC1//PBD1//PAE2//cICDH//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:0010584 pollen exine formation BP 0.0108426478282519 AtSWEET8//LAP3//AT1G33430//AT3G23770 GO:0019827 stem cell maintenance BP 0.0108426478282519 HY5//AtCYP71//AGL24//ATHAM1 GO:0048864 stem cell development BP 0.0118689414863816 HY5//AtCYP71//AGL24//ATHAM1 GO:0055114 oxidation-reduction process BP 0.0121065951642772 AT4G15520//AT5G20080//sks15//ATNADP-ME3//AT5G62420//ATHDA5//AT5G60160//AT5G51880//AT5G51970//PBB2//SDR1//CYP81H1//AT4G02580//AT3G19010//AT2G17970//CYP71B22//PAE2//AT3G09760//AT1G12570//ATIMD2//AT1G53340//cICDH//ATNR2//ATPAE1//CYP71B29//CYP708A3//ALDH6B2//RPT5B//AT2G19650//AKR4C10//AtSLD2 GO:0010033 response to organic substance BP 0.0125066032404484 ATMYB12//AT5G20810//AIP2//BETA//SHI//ATEXO70E2//AT5G53900//RPT4A//PBB2//CIR1//HY5//OBF4//FKD1//SDR1//RPL24//PAD1//AtCYP71//KAI2//AGL24//AMT1;1//RHA1B//AT4G02580//AT1G34010//PBD1//CYP71B22//AT3G19950//AT3G23550//JAZ9//AT1G69890//AT1G72430//AtMYB62//cICDH//NUZ//ATPAE1//AT1G16210//AT2G12900//AT1G79210//RPT5B//AT2G25530//AtTHP1//AT2G23910//AGP17 GO:0009062 fatty acid catabolic process BP 0.0125312738646151 AT4G15520//ATHDA5//AT5G60160//PBB2//PAE2//AT3G09760//ATPAE1//RPT5B GO:0010208 pollen wall assembly BP 0.0129555549239575 AtSWEET8//LAP3//AT1G33430//AT3G23770 GO:0010927 cellular component assembly involved in ... BP 0.0129555549239575 AtSWEET8//LAP3//AT1G33430//AT3G23770 GO:0048863 stem cell differentiation BP 0.0129555549239575 HY5//AtCYP71//AGL24//ATHAM1 GO:0085029 extracellular matrix assembly BP 0.0129555549239575 AtSWEET8//LAP3//AT1G33430//AT3G23770 GO:0072329 monocarboxylic acid catabolic process BP 0.0130591747748377 AT4G15520//ATHDA5//AT5G60160//PBB2//PAE2//AT3G09760//ATPAE1//RPT5B GO:1990267 response to transition metal nanoparticl... BP 0.0136832367756265 ATMIPS3//ATZIP9//AtZIP1//cICDH//AT2G32520 GO:0048646 anatomical structure formation involved ... BP 0.0140412259646411 AP2//WOX2//AtSWEET8//LAP3//AtCYP71//AT4G29360//AMT1;1//AT1G33430//AT3G23770//PIN6 GO:0042127 regulation of cell proliferation BP 0.0145925619613007 WOX2//HY5//FKD1//AT4G29360//AT1G16210 GO:0044703 multi-organism reproductive process BP 0.0146654065302363 AT-EXPR//AT5G20810//AP2//ATNADP-ME3//AtSWEET8//ATIPK2A//LAP3//PIP5K4//AtCYP71//BGAL11//RIC10//ATNAS4//POD1//AT2G34590 GO:0006743 ubiquinone metabolic process BP 0.0150694588644654 AtPPT1//ATIMD2//EMB3147 GO:0006744 ubiquinone biosynthetic process BP 0.0150694588644654 AtPPT1//ATIMD2//EMB3147 GO:0048588 developmental cell growth BP 0.0152095566148084 AT5G20810//ATNADP-ME3//AtSWEET8//ATIPK2A//LAP3//PIP5K4//BGAL11//RIC10//ATNAS4//ATNR2//ATHAM1 GO:0048229 gametophyte development BP 0.0155346815232567 AtSWEET8//LAP3//AtCYP71//UND//CRCK2//AT1G33430//MMD1//AT3G23770//ATNAS4//AGL61//RPT5B//ATBARD1 GO:0030198 extracellular matrix organization BP 0.0165884725331715 AtSWEET8//LAP3//AT1G33430//AT3G23770 GO:0043062 extracellular structure organization BP 0.0165884725331715 AtSWEET8//LAP3//AT1G33430//AT3G23770 GO:0045596 negative regulation of cell differentiat... BP 0.0165884725331715 HY5//AtCYP71//AGL24//ATHAM1 GO:0009827 plant-type cell wall modification BP 0.0166096861519819 AT-EXPR//AT5G20810//ATNADP-ME3//AtSWEET8//LAP3//PIP5K4//BGAL11 GO:0071705 nitrogen compound transport BP 0.0167591579471988 AIP2//ATNRT2.4//HY5//OBF4//AT5G08090//AT5G03030//AtCYP71//AMT1;1//AT1G19160//AT1G76530//AtRLP1//AT1G15590//CYP71B29//AT2G05720//ZIP5//AtTHP1 GO:0042752 regulation of circadian rhythm BP 0.0169358178171164 HY5//JMJ30//ELF4 GO:0009812 flavonoid metabolic process BP 0.0172207903762321 ATMYB12//HY5//SDR1//KAI2//AT3G19030//AT3G19010//AT2G25530//AT2G23910 GO:0098655 cation transmembrane transport BP 0.0172605075811648 ACA8//ATZIP9//AtZIP1//VHA-E2//ZIP5//AT2G19680 GO:0098662 inorganic cation transmembrane transport BP 0.0172605075811648 ACA8//ATZIP9//AtZIP1//VHA-E2//ZIP5//AT2G19680 GO:0009057 macromolecule catabolic process BP 0.0182525994048402 AtBAM3//ATNADP-ME3//BAM8//RPT4A//PBB2//ATFTSH6//PAD1//AT4G02580//ATUBP6//PAC1//PBD1//PAE2//cICDH//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:0050896 response to stimulus BP 0.018930196950518 ATMYB12//AtBAM3//AT5G20810//AT5G20080//AT5G20950//AIP2//BETA//SHI//ATEXO70E2//ATNRT2.4//AT5G60160//WOX2//ACA8//THI1//AtPSKR2//AT5G53900//AT5G47250//RPT4A//PBB2//AT5G38340//CIR1//ATVAMP714//AT5G18350//ATFTSH6//HY5//OBF4//ATMIPS3//ABCG22//FKD1//SDR1//RPL24//PAD1//LPPepsilon1//AtCYP71//KAI2//SRFR1//ATMLH3//ATZIP9//AGL24//CRK24//AMT1;1//RHA1B//AT4G02580//AT1G34010//ATUBP6//CXC750//AT1G66100//PAC1//AT3G19030//AT3G19010//PBD1//AT3G21950//CYP71B22//AtZIP1//AT3G25150//AT3G19950//AT3G23550//LTP6//PHR1//POD1//JAZ9//AT1G69890//AT1G72430//AtMYB62//AT1G10880//AT1G12180//AtRLP1//ATMLO14//AT1G48550//cICDH//ATNR2//NUZ//ATPAE1//AT1G47530//AT1G16210//CYP71B29//ALDH6B2//AGL61//ATRL2//AT2G12900//AT1G79210//ZIP5//RPT5B//AT1G22900//ATBARD1//AT2G25530//AtTHP1//AT2G19650//AT2G23910//ATGLR2.9//AT2G32520//AGP17//ELF4 GO:0098660 inorganic ion transmembrane transport BP 0.0190411113584737 ACA8//ATZIP9//AtZIP1//VHA-E2//ZIP5//AT2G19680 GO:0044248 cellular catabolic process BP 0.0206798481899253 AtBAM3//AT4G15520//BETA//ATNADP-ME3//ATHDA5//AT5G60160//RPT4A//PBB2//ATFTSH6//PAD1//BGAL11//AT4G29570//AtPPT1//ATTOM1//AT4G11570//AT4G02580//ATUBP6//PAC1//PBD1//AT-HSFA6B//PAE2//AT3G09760//cICDH//ATNR2//ATPAE1//AT1G16210//ALDH6B2//AT1G79210//RPT5B//AT2G25530 GO:0006476 protein deacetylation BP 0.0209081210216168 ATHDA5//HDA09 GO:0035601 protein deacylation BP 0.0209081210216168 ATHDA5//HDA09 GO:0098732 macromolecule deacylation BP 0.0209081210216168 ATHDA5//HDA09 GO:0006863 purine nucleobase transport BP 0.023349705830196 AT5G08090//AT1G19160//AT1G76530//AT1G15590//AT2G05720 GO:0015851 nucleobase transport BP 0.023349705830196 AT5G08090//AT1G19160//AT1G76530//AT1G15590//AT2G05720 GO:0009056 catabolic process BP 0.0235321555137954 AtBAM3//AT4G15520//AT5G20080//BETA//ATNADP-ME3//ATHDA5//AT5G60160//BAM8//RPT4A//PBB2//ATFTSH6//PAD1//BGAL11//PFK6//AT4G29570//AtPPT1//ATTOM1//AT4G11570//AT4G02580//ATUBP6//PAC1//PBD1//AT-HSFA6B//PAE2//AT3G09760//AT1G68440//cICDH//ATNR2//ATPAE1//AT1G16210//ALDH6B2//AT1G79210//RPT5B//ATPSAT1//AT2G25530 GO:0006406 mRNA export from nucleus BP 0.0256386275134682 HY5//AtCYP71//AtTHP1 GO:0051028 mRNA transport BP 0.0256386275134682 HY5//AtCYP71//AtTHP1 GO:0048468 cell development BP 0.0278787393876534 AT5G20810//ATNADP-ME3//AtSWEET8//ATMYB23//HY5//ATIPK2A//LAP3//PIP5K4//AtCYP71//BGAL11//AGL24//RIC10//ATNAS4//ATNR2//ATHAM1 GO:0043687 post-translational protein modification BP 0.0350183543481055 HY5//AtCYP71//SRFR1//NUZ GO:0044265 cellular macromolecule catabolic process BP 0.0353229940415364 ATNADP-ME3//RPT4A//PBB2//ATFTSH6//PAD1//AT4G02580//ATUBP6//PAC1//PBD1//PAE2//cICDH//ATPAE1//AT1G16210//AT1G79210//RPT5B GO:0009826 unidimensional cell growth BP 0.0375275384693486 AT-EXPR//AT5G20810//ATNADP-ME3//AtSWEET8//ATIPK2A//LAP3//PIP5K4//BGAL11//RIC10//ATNAS4//ATHAM1 GO:0042545 cell wall modification BP 0.037932824105632 AT-EXPR//AT5G20810//ATNADP-ME3//AtSWEET8//LAP3//PIP5K4//BGAL11//AT3G25150//AT1G23200 GO:0032989 cellular component morphogenesis BP 0.038099383921434 AT-EXPR//AT5G20810//ATNADP-ME3//AtSWEET8//ATMYB23//ATIPK2A//LAP3//PIP5K4//AtCYP71//BGAL11//RIC10//AT1G33430//AT3G23770//ATNAS4//ATHAM1 GO:0016032 viral process BP 0.0398149719835141 ATTOM1//TOM2B GO:0006810 transport BP 0.0403183255329896 AT4G15520//AT5G20080//AIP2//BETA//ATEXO70E2//ATHDA5//ATNRT2.4//AT5G60160//ACA8//THI1//AT5G41970//ATVAMP714//HY5//OBF4//AT5G08090//ABCG22//AT5G03030//TXR1//PIP5K4//PAD1//AtCYP71//ATZIP9//AGL24//AMT1;1//AT1G19160//AT3G19030//AT3G19010//AT3G29070//AT2G22050//AtZIP1//AT3G25150//AT3G23550//VHA-E2//LTP6//AT3G09760//ATNAS4//BOR5//AT1G76530//POD1//AtRLP1//AT1G48550//AT1G15590//cICDH//AT1G47530//AT1G16210//CYP71B29//AT2G05720//ZIP5//PIN6//AtTHP1//AT2G19680//ATGLR2.9 GO:0009411 response to UV BP 0.0423717870069498 ATMYB12//HY5//SDR1//KAI2//PHR1//AT2G25530//AT2G23910 GO:0006403 RNA localization BP 0.0423883065695448 HY5//AtCYP71//AtTHP1 GO:0006405 RNA export from nucleus BP 0.0423883065695448 HY5//AtCYP71//AtTHP1 GO:0050657 nucleic acid transport BP 0.0423883065695448 HY5//AtCYP71//AtTHP1 GO:0050658 RNA transport BP 0.0423883065695448 HY5//AtCYP71//AtTHP1 GO:0051236 establishment of RNA localization BP 0.0423883065695448 HY5//AtCYP71//AtTHP1 GO:0009116 nucleoside metabolic process BP 0.0440159646092292 ACA8//AT4G29570//APT3//AT4G02580//VHA-E2//AT2G19680 GO:0044712 single-organism catabolic process BP 0.0444786680489246 AT4G15520//AT5G20080//BETA//ATHDA5//AT5G60160//PBB2//PAD1//BGAL11//PFK6//AT4G29570//AtPPT1//AT4G11570//PAC1//AT-HSFA6B//PAE2//AT3G09760//cICDH//ATNR2//ATPAE1//ALDH6B2//RPT5B//ATPSAT1//AT2G25530 GO:0051168 nuclear export BP 0.0456016039802365 HY5//AtCYP71//AtTHP1 GO:1901661 quinone metabolic process BP 0.0456016039802365 AtPPT1//ATIMD2//EMB3147 GO:1901663 quinone biosynthetic process BP 0.0456016039802365 AtPPT1//ATIMD2//EMB3147 GO:0006094 gluconeogenesis BP 0.045631233836553 ATNADP-ME3//PAD1//PAC1//cICDH//ATPAE1//RPT5B GO:0042181 ketone biosynthetic process BP 0.0489321072553124 AtPPT1//ATIMD2//EMB3147 GO:0019319 hexose biosynthetic process BP 0.0489714609212394 ATNADP-ME3//PAD1//PAC1//cICDH//ATPAE1//RPT5B GO:0010073 meristem maintenance BP 0.0495630874687954 AP2//HY5//AtCYP71//AGL24//AtMYB62//PIN6//ATHAM1 GO:0051704 multi-organism process BP 0.0500503532372535 AT-EXPR//AT5G20810//AT5G20950//AP2//BETA//ATNADP-ME3//ATEXO70E2//ACA8//THI1//AtSWEET8//OBF4//ATIPK2A//LAP3//PIP5K4//AtCYP71//SRFR1//BGAL11//CRK24//ATTOM1//AMT1;1//RIC10//CXC750//ATNAS4//POD1//JAZ9//TOM2B//cICDH//ATNR2//AT1G16210//AT1G79210//ZIP5//AT2G34590 GO:0010305 leaf vascular tissue pattern formation BP 0.0509582894399639 FKD1//AtCYP71