GOID TERM ONTOLOGY pValue Genes GO:0050826 response to freezing BP 0.00198989100638242 ACBP//AT3//AHG1//PAP85 GO:0015802 basic amino acid transport BP 0.0134409006678149 ALA3//IMPA-4 GO:0048831 regulation of shoot system development BP 0.0145341449163148 FWA//AT3//AGL71//AHG1//AT2G33640//BAM7 GO:0048569 post-embryonic organ development BP 0.0156238975128857 ATWRKY75//AT4G36600//AGL71//AT3G45540//AT2G33640//AT3G25670//QRT2//AT1G76700//ALA3//RGA GO:0018208 peptidyl-proline modification BP 0.0157294803111939 FKBP16-2//AT1G18170 GO:0019915 lipid storage BP 0.0178370189466245 AT3//AHG1//PAP85 GO:0009409 response to cold BP 0.0187952710527954 ACBP//AT3//AGL71//AHG1//KCS20//AT3G17020//PAP85//ATHVA22A//GDCH//BAM7 GO:2000241 regulation of reproductive process BP 0.0195129308884042 FWA//AT3//AGL71//AHG1//AT2G33640//RGA GO:0048580 regulation of post-embryonic development BP 0.0198779318254005 FWA//AT3//AGL71//AHG1//EPFL9//AT2G33640//RGA GO:0006862 nucleotide transport BP 0.0207632491034259 ALA3//IMPA-4 GO:0016567 protein ubiquitination BP 0.0249730413056259 AT3//AHG1//AT5G09800//AT3G61390//FBI1 GO:0000097 sulfur amino acid biosynthetic process BP 0.025547398283414 CP22//ACBP//SAH7//AT1G55360//AtCGS1//GDCH GO:0007030 Golgi organization BP 0.0273674195474495 ACBP//AtENODL19//SAH7//RGA GO:0009909 regulation of flower development BP 0.0304982462570428 FWA//AT3//AGL71//AHG1//AT2G33640 GO:0010876 lipid localization BP 0.0304982462570428 ACBP//AT3//AHG1//PAP85//ALA3 GO:0032446 protein modification by small protein co... BP 0.0314880853031786 AT3//AHG1//AT5G09800//AT3G61390//FBI1 GO:0051235 maintenance of location BP 0.0316172051487678 AT3//AHG1//PAP85 GO:0048367 shoot system development BP 0.0332264754876814 CP22//FWA//FTRA2//AT4G36600//AT3//AGL71//AHG1//AT3G45540//AT2G33640//UGT76B1//AT3G25670//QRT2//ALA3//RGA//BAM7 GO:0006534 cysteine metabolic process BP 0.0367388132978226 CP22//ACBP//SAH7//AT1G55360//GDCH GO:0019344 cysteine biosynthetic process BP 0.0367388132978226 CP22//ACBP//SAH7//AT1G55360//GDCH GO:0048527 lateral root development BP 0.037155011676467 ATWRKY75//AT1G76700//ALA3 GO:0048444 floral organ morphogenesis BP 0.03899712429512 AT4G36600//AT3G45540//AT2G33640//RGA GO:0048563 post-embryonic organ morphogenesis BP 0.03899712429512 AT4G36600//AT3G45540//AT2G33640//RGA GO:0048528 post-embryonic root development BP 0.0411046817683362 ATWRKY75//AT1G76700//ALA3 GO:0009070 serine family amino acid biosynthetic pr... BP 0.0424992260790366 CP22//ACBP//SAH7//AT1G55360//GDCH GO:0015748 organophosphate ester transport BP 0.042666267056679 ALA3//IMPA-4 GO:0045454 cell redox homeostasis BP 0.0431559293563983 AT1G77370//CcdA//AT3G53220 GO:0010256 endomembrane system organization BP 0.0434133063298535 ACBP//AtENODL19//SAH7//RGA GO:0000096 sulfur amino acid metabolic process BP 0.0441514270297932 CP22//ACBP//SAH7//AT1G55360//AtCGS1//GDCH GO:0006950 response to stress BP 0.0454014872260089 ATDI21//ATWRKY75//ACBP//AT3//AGL71//AHG1//KCS20//AT5G40470//ATMTP3//ATBZIP24//APX6//AT4G27220//NLP7//AtENODL19//LCR17//AT4G11340//SAH7//AFP2//UGT76B1//AT3G17020//PAP85//AT3G04210//AT1G76700//ATHVA22A//AT1G19480//ORA59//AT1G26730//AT1G49980//AT1G72890//ALA3//IMPA-4//AtOPR3//RGA//GDCH//BAM7 GO:0009908 flower development BP 0.0529699830753626 FWA//AT4G36600//AT3//AGL71//AHG1//AT3G45540//AT2G33640//AT3G25670//QRT2//RGA GO:0043090 amino acid import BP 0.0538236462900191 ALA3//IMPA-4 GO:0090567 reproductive shoot system development BP 0.0569895053877346 FWA//AT4G36600//AT3//AGL71//AHG1//AT3G45540//AT2G33640//AT3G25670//QRT2//RGA GO:0006816 calcium ion transport BP 0.0613475727709295 ACBP//AtENODL19//SAH7 GO:0048582 positive regulation of post-embryonic de... BP 0.061769166996923 FWA//EPFL9 GO:0042538 hyperosmotic salinity response BP 0.0619123961389858 ATBZIP24//ATHVA22A//AtOPR3//RGA GO:0009266 response to temperature stimulus BP 0.0640072004464819 ACBP//AT3//AGL71//AHG1//KCS20//AT3G17020//PAP85//ATHVA22A//RGA//GDCH//BAM7 GO:0010043 response to zinc ion BP 0.070084963056148 ATMTP3//AT4G09110 GO:0009069 serine family amino acid metabolic proce... BP 0.070736369164124 CP22//ACBP//SAH7//AT1G55360//GDCH GO:0009415 response to water BP 0.0738148516577423 ATDI21//ATWRKY75//NLP7//AFP2//ATHVA22A//LEA//AtOPR3 GO:0070647 protein modification by small protein co... BP 0.0740174802804397 AT3//AHG1//AT5G09800//AT3G61390//FBI1 GO:0009312 oligosaccharide biosynthetic process BP 0.0743726450231099 AT1G06020//RGA GO:0009845 seed germination BP 0.0796869565531776 AT3//AHG1//PAP85//RGA GO:0044272 sulfur compound biosynthetic process BP 0.0829764151184437 CP22//FTRA2//ACBP//SAH7//AT1G55360//AtCGS1//GDCH GO:0000272 polysaccharide catabolic process BP 0.0831901941306495 QRT2//BAM7 GO:1901607 alpha-amino acid biosynthetic process BP 0.0872595576398807 CP22//ACBP//SAH7//AT1G55360//AtCGS1//GDCH GO:0007155 cell adhesion BP 0.0877133589859399 FWA//AT5G42620 GO:0022610 biological adhesion BP 0.0877133589859399 FWA//AT5G42620 GO:0051240 positive regulation of multicellular org... BP 0.0877133589859399 FWA//EPFL9 GO:0090351 seedling development BP 0.0883198243588373 AT3//AHG1//PAP85//RGA GO:0048437 floral organ development BP 0.0884947205955262 AT4G36600//AGL71//AT3G45540//AT2G33640//AT3G25670//QRT2//RGA GO:2000026 regulation of multicellular organismal d... BP 0.091604119982936 FWA//AT3//AGL71//AHG1//EPFL9//AT2G33640//RGA//BAM7 GO:0006888 ER to Golgi vesicle-mediated transport BP 0.0923084512206387 ALA3//IMPA-4 GO:0051094 positive regulation of developmental pro... BP 0.0923084512206387 FWA//EPFL9 GO:0070838 divalent metal ion transport BP 0.0927997162610068 ACBP//ATMTP3//AtENODL19//SAH7 GO:0048513 organ development BP 0.0933961543138818 AT5G12350//FWA//ATWRKY75//FTRA2//AT4G36600//AT3//AGL71//AHG1//AT3G45540//AT2G33640//UGT76B1//AT3G25670//QRT2//AT1G76700//ALA3//RGA GO:0072511 divalent inorganic cation transport BP 0.0950797675533042 ACBP//ATMTP3//AtENODL19//SAH7 GO:0009628 response to abiotic stimulus BP 0.0994693933515674 AT5G12350//CP22//FWA//ATDI21//ATWRKY75//ACBP//AT3//AGL71//AHG1//AT5G48500//KCS20//ATBZIP24//NLP7//AtENODL19//SAH7//AFP2//AT3G17020//PAP85//FBI1//ATHVA22A//LEA//AtOPR3//RGA//GDCH//BAM7 GO:0050896 response to stimulus BP 0.100369582604038 AT5G12350//CP22//FWA//ATDI21//ATWRKY75//ACBP//AT3//AT5G66260//ATDGK4//AT5G57150//AGL71//AHG1//AT5G48500//KCS20//AT5G40470//AT5G09800//ATMTP3//AT3G52480//ATBZIP24//APX6//AT4G27220//NLP7//AtENODL19//LCR17//AT4G11340//GASA3//AT4G09110//SAH7//AFP2//UGT76B1//AT3G25670//AT3G17020//PAP85//AT3G04210//FBI1//AT1G76700//ATHVA22A//AT1G19480//ORA59//AT1G26730//AT1G49980//CBSX4//AT1G72890//ALA3//AXR3//LEA//IMPA-4//AtOPR3//ARR16//RGA//GDCH//BAM7 GO:0010162 seed dormancy process BP 0.103280268487105 AT3//AHG1//RGA GO:0022611 dormancy process BP 0.103280268487105 AT3//AHG1//RGA GO:0051239 regulation of multicellular organismal p... BP 0.103743430204045 FWA//AT3//AGL71//AHG1//EPFL9//AT2G33640//RGA//BAM7 GO:0009737 response to abscisic acid BP 0.109415904772778 ATDI21//AT3//AHG1//AFP2//FBI1//ATHVA22A//AtOPR3//RGA GO:0006355 regulation of transcription, DNA-templat... BP 0.115287232759988 FWA//ATWRKY75//FTRA2//AT1G16640//AT5G57150//AGL71//AT5G07310//ATBZIP24//BBX12//AFP2//AT3G04450//AT3G10590//AT3G10330//AtMYB20//ORA59//HMGA//AXR3//AT1G24210//ARR16//RGA GO:1903506 regulation of nucleic acid-templated tra... BP 0.115287232759988 FWA//ATWRKY75//FTRA2//AT1G16640//AT5G57150//AGL71//AT5G07310//ATBZIP24//BBX12//AFP2//AT3G04450//AT3G10590//AT3G10330//AtMYB20//ORA59//HMGA//AXR3//AT1G24210//ARR16//RGA GO:2001141 regulation of RNA biosynthetic process BP 0.115287232759988 FWA//ATWRKY75//FTRA2//AT1G16640//AT5G57150//AGL71//AT5G07310//ATBZIP24//BBX12//AFP2//AT3G04450//AT3G10590//AT3G10330//AtMYB20//ORA59//HMGA//AXR3//AT1G24210//ARR16//RGA GO:0009756 carbohydrate mediated signaling BP 0.116255225094853 AT3//AHG1 GO:0010182 sugar mediated signaling pathway BP 0.116255225094853 AT3//AHG1 GO:0042744 hydrogen peroxide catabolic process BP 0.116255225094853 AT2G46600//RGA GO:0009887 organ morphogenesis BP 0.117972891279131 AT5G12350//FTRA2//AT4G36600//AT3G45540//AT2G33640//RGA GO:0051252 regulation of RNA metabolic process BP 0.121262426255264 FWA//ATWRKY75//FTRA2//AT1G16640//AT5G57150//AGL71//AT5G07310//ATBZIP24//BBX12//AFP2//AT3G04450//AT3G10590//AT3G10330//AtMYB20//ORA59//HMGA//AXR3//AT1G24210//ARR16//RGA GO:0009886 post-embryonic morphogenesis BP 0.129280203286348 CP22//AT4G36600//AT3G45540//AT2G33640//AT3G25670//RGA GO:0015931 nucleobase-containing compound transport BP 0.131296343700657 ALA3//IMPA-4 GO:0050789 regulation of biological process BP 0.136795993069631 AT5G12350//CP22//FWA//ATWRKY75//FTRA2//AT3//AT1G16640//AT1G77370//ATDGK4//AT5G57150//CcdA//AGL71//AHG1//AT5G40470//AT5G07310//AT3G53220//ATBZIP24//EPFL9//AT4G11340//BBX12//AT2G33640//AFP2//AT3G25670//AT3G04210//AT3G04450//AT3G10590//AT3G10330//FBI1//AtMYB20//AT1G76700//ORA59//AT1G72890//HMGA//ALA3//AXR3//IMPA-4//AT1G24210//AtOPR3//ARR16//RGA//GDCH//BAM7 GO:0010431 seed maturation BP 0.139503310849053 AT3//AHG1//RGA GO:1901605 alpha-amino acid metabolic process BP 0.139838169915984 CP22//ACBP//SAH7//AT1G55360//AtCGS1//AtOPR3//GDCH GO:0006972 hyperosmotic response BP 0.140392369603216 ATBZIP24//ATHVA22A//AtOPR3//RGA GO:0006829 zinc II ion transport BP 0.140747925202196 545_ GO:0009636 response to toxic substance BP 0.140747925202196 545_ GO:0009937 regulation of gibberellic acid mediated ... BP 0.140747925202196 331_ GO:0010091 trichome branching BP 0.140747925202196 460_ GO:1903338 regulation of cell wall organization or ... BP 0.140747925202196 822_ GO:0071322 cellular response to carbohydrate stimul... BP 0.141559283844505 AT3//AHG1 GO:0007623 circadian rhythm BP 0.146503171951983 AT1G07050//FBI1//ARR16 GO:0048511 rhythmic process BP 0.146503171951983 AT1G07050//FBI1//ARR16 GO:0010556 regulation of macromolecule biosynthetic... BP 0.148012321578931 FWA//ATWRKY75//FTRA2//AT1G16640//AT5G57150//AGL71//AT5G07310//ATBZIP24//BBX12//AFP2//AT3G04450//AT3G10590//AT3G10330//AtMYB20//ORA59//HMGA//AXR3//AT1G24210//ARR16//RGA GO:2000112 regulation of cellular macromolecule bio... BP 0.148012321578931 FWA//ATWRKY75//FTRA2//AT1G16640//AT5G57150//AGL71//AT5G07310//ATBZIP24//BBX12//AFP2//AT3G04450//AT3G10590//AT3G10330//AtMYB20//ORA59//HMGA//AXR3//AT1G24210//ARR16//RGA GO:0009414 response to water deprivation BP 0.149241355073511 ATDI21//ATWRKY75//NLP7//AFP2//ATHVA22A//AtOPR3 GO:0019219 regulation of nucleobase-containing comp... BP 0.152945960649214 FWA//ATWRKY75//FTRA2//AT1G16640//AT5G57150//AGL71//AT5G07310//ATBZIP24//BBX12//AFP2//AT3G04450//AT3G10590//AT3G10330//AtMYB20//ORA59//HMGA//AXR3//AT1G24210//ARR16//RGA GO:0006284 base-excision repair BP 0.153691576148828 672_ GO:0007186 G-protein coupled receptor signaling pat... BP 0.153691576148828 873_ GO:0010187 negative regulation of seed germination BP 0.153691576148828 331_ GO:0017004 cytochrome complex assembly BP 0.153691576148828 181_ GO:0008652 cellular amino acid biosynthetic process BP 0.155489639016612 CP22//ACBP//SAH7//AT1G55360//AtCGS1//GDCH GO:0044087 regulation of cellular component biogene... BP 0.162561774152414 FWA//AtMYB20 GO:0065007 biological regulation BP 0.165854394340261 AT5G12350//CP22//FWA//AT4G14380//ATWRKY75//FTRA2//AT3//AT1G16640//AT1G77370//ATDGK4//AT5G57150//CcdA//AGL71//AHG1//AT5G40470//AT5G07310//AT3G53220//ATBZIP24//EPFL9//AT4G11340//BBX12//AT2G33640//AFP2//AT3G25670//PAP85//AT3G04210//AT3G04450//AT3G10590//AT3G10330//FBI1//AtMYB20//AT1G76700//ORA59//AT1G72890//HMGA//ALA3//AXR3//IMPA-4//SLAH1//AT1G24210//AtOPR3//ARR16//RGA//GDCH//BAM7 GO:0051171 regulation of nitrogen compound metaboli... BP 0.168302745206525 FWA//ATWRKY75//FTRA2//AT1G16640//AT5G57150//AGL71//AT5G07310//ATBZIP24//BBX12//AFP2//AT3G04450//AT3G10590//AT3G10330//AtMYB20//ORA59//HMGA//AXR3//AT1G24210//ARR16//RGA GO:0048609 multicellular organismal reproductive pr... BP 0.168678974815366 AT3//AHG1//QRT2//RGA GO:0031326 regulation of cellular biosynthetic proc... BP 0.171472817503476 FWA//ATWRKY75//FTRA2//AT1G16640//AT5G57150//AGL71//AT5G07310//ATBZIP24//BBX12//AFP2//AT3G04450//AT3G10590//AT3G10330//AtMYB20//ORA59//HMGA//AXR3//AT1G24210//ARR16//RGA GO:0050794 regulation of cellular process BP 0.176631201857024 AT5G12350//FWA//ATWRKY75//FTRA2//AT3//AT1G16640//AT1G77370//ATDGK4//AT5G57150//CcdA//AGL71//AHG1//AT5G07310//AT3G53220//ATBZIP24//AT4G11340//BBX12//AFP2//AT3G25670//AT3G04210//AT3G04450//AT3G10590//AT3G10330//FBI1//AtMYB20//AT1G76700//ORA59//AT1G72890//HMGA//ALA3//AXR3//IMPA-4//AT1G24210//AtOPR3//ARR16//RGA