GOID TERM ONTOLOGY pValue Genes GO:0006767 water-soluble vitamin metabolic process BP 0.000673299809360793 VTC5//AtPLR1//ATPPOX//AT5G23330//ATKDSA2//AtGulLO2 GO:0042364 water-soluble vitamin biosynthetic proce... BP 0.000673299809360793 VTC5//AtPLR1//ATPPOX//AT5G23330//ATKDSA2//AtGulLO2 GO:0009110 vitamin biosynthetic process BP 0.00191867410160636 VTC5//AtPLR1//ATPPOX//AT5G23330//ATKDSA2//AtGulLO2 GO:0006766 vitamin metabolic process BP 0.00259662273747374 VTC5//AtPLR1//ATPPOX//AT5G23330//CORI3//GLB1//ATKDSA2//AtGulLO2 GO:0019748 secondary metabolic process BP 0.00345569675943453 ATPRR1//ATGSTU9//APO2//AtPLR1//ATPPOX//ATGSTT1//GDH2//AT3G56010//ATCAD7//LAP5//ATGPX7//AT4G26470//CORI3//GLB1//AtCRL2//ESM1//AT3G28940//AtGXMT1//ATGSTU16//AT2G31670//ATPAL1//ATGPX1//AT2G25450//ATGSTU6 GO:0052325 cell wall pectin biosynthetic process BP 0.00368485152528871 GAUT14//ATKDSA2//AtkdsA1 GO:0072525 pyridine-containing compound biosyntheti... BP 0.00642929815690257 AtPLR1//ATPPOX//ATKDSA2 GO:0052546 cell wall pectin metabolic process BP 0.00646886909321552 GAUT14//ATKDSA2//AtkdsA1//ARP2 GO:0045489 pectin biosynthetic process BP 0.0123494010219975 GAUT14//ATKDSA2//AtkdsA1 GO:0044264 cellular polysaccharide metabolic proces... BP 0.0155216588026139 XTH15//ATPRR1//GAUT14//APO2//AtPLR1//RGP4//EXGT-A4//AT3G56010//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//AtGXMT1//APG2//ATKDSA2//AtkdsA1//NHL12//ARP2//AT2G27740 GO:0051049 regulation of transport BP 0.016819120242312 ATSNAP33//APO2//FLS2//AT5G44680//AT4G26470//AT3G19850//ISPF//AtGDU4//PP2A GO:0044550 secondary metabolite biosynthetic proces... BP 0.0168651087344717 ATPRR1//APO2//AtPLR1//ATPPOX//ATCAD7//LAP5//CORI3//AtCRL2//ESM1//AT3G28940//AT2G31670//ATPAL1//AT2G25450 GO:0043269 regulation of ion transport BP 0.0181816871806901 ATSNAP33//APO2//FLS2//AT5G44680//AT4G26470//AT3G19850//ISPF//AtGDU4 GO:0019252 starch biosynthetic process BP 0.018409669822248 APO2//AtPLR1//AT3G56010//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//APG2//NHL12 GO:0033692 cellular polysaccharide biosynthetic pro... BP 0.0185842957522577 ATPRR1//GAUT14//APO2//AtPLR1//RGP4//AT3G56010//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//AtGXMT1//APG2//ATKDSA2//AtkdsA1//NHL12//AT2G27740 GO:0042538 hyperosmotic salinity response BP 0.019155378054466 VTC5//AT4G30650//CORI3//AT3G05640//ATHVA22A//JAZ5//ATERF3 GO:0080167 response to karrikin BP 0.019155378054466 AT1G25275//AT5G18470//ATMSRA2//ATEXP20//ATGPX7//ATMYB90//ATPAL1 GO:0010393 galacturonan metabolic process BP 0.0254668499752944 GAUT14//ATKDSA2//AtkdsA1//ARP2 GO:0045488 pectin metabolic process BP 0.0254668499752944 GAUT14//ATKDSA2//AtkdsA1//ARP2 GO:0044036 cell wall macromolecule metabolic proces... BP 0.0270372549949179 ATPRR1//GAUT14//CYCD4;1//AT5G38020//NET1A//AtGXMT1//ATKDSA2//AtkdsA1//ARP2//AT2G27740 GO:0016144 S-glycoside biosynthetic process BP 0.0301904244052506 APO2//AtPLR1//ATPPOX//CORI3//ESM1//AT3G28940//AT2G31670//AT2G25450 GO:0019758 glycosinolate biosynthetic process BP 0.0301904244052506 APO2//AtPLR1//ATPPOX//CORI3//ESM1//AT3G28940//AT2G31670//AT2G25450 GO:0019761 glucosinolate biosynthetic process BP 0.0301904244052506 APO2//AtPLR1//ATPPOX//CORI3//ESM1//AT3G28940//AT2G31670//AT2G25450 GO:0000023 maltose metabolic process BP 0.0316330346750149 APO2//AtPLR1//AT3G56010//LSF2//AT3G09050//AT2G43530//APG2//NHL12 GO:0044262 cellular carbohydrate metabolic process BP 0.0318990057900279 XTH15//ATPRR1//GAUT14//APO2//AtPLR1//RGP4//EXGT-A4//AT3G56310//AT3G56010//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//AtGXMT1//APG2//ATKDSA2//AtkdsA1//NHL12//ARP2//AT2G25450//AT2G27740 GO:0016143 S-glycoside metabolic process BP 0.0347800365399064 APO2//AtPLR1//ATPPOX//AT3G56010//CORI3//ESM1//AT3G28940//AT2G31670//AT2G25450 GO:0019757 glycosinolate metabolic process BP 0.0347800365399064 APO2//AtPLR1//ATPPOX//AT3G56010//CORI3//ESM1//AT3G28940//AT2G31670//AT2G25450 GO:0019760 glucosinolate metabolic process BP 0.0347800365399064 APO2//AtPLR1//ATPPOX//AT3G56010//CORI3//ESM1//AT3G28940//AT2G31670//AT2G25450 GO:0015824 proline transport BP 0.0355030451234308 DVL18//AT5G55050//AtUGT85A3//AT2G27660//ATRNS1 GO:0034637 cellular carbohydrate biosynthetic proce... BP 0.036017665358263 ATPRR1//GAUT14//APO2//AtPLR1//RGP4//AT3G56010//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//AtGXMT1//APG2//ATKDSA2//AtkdsA1//NHL12//AT2G27740 GO:0032879 regulation of localization BP 0.0377033910784682 ATSNAP33//APO2//FLS2//AT5G44680//AT4G26470//AT3G19850//ISPF//AtGDU4//PP2A GO:0015804 neutral amino acid transport BP 0.037962869001289 DVL18//AT5G55050//AtUGT85A3//AT2G27660//ATRNS1 GO:0005982 starch metabolic process BP 0.0382299260425814 APO2//AtPLR1//AT3G56010//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//APG2//NHL12 GO:0009718 anthocyanin-containing compound biosynth... BP 0.0397247624785521 AtRbcX1//GLB1//ARF10//ATRNS1 GO:0005984 disaccharide metabolic process BP 0.0407903466306241 APO2//AtPLR1//AT3G56310//AT3G56010//LSF2//AT3G09050//AT2G43530//APG2//NHL12 GO:0019852 L-ascorbic acid metabolic process BP 0.0416601480678488 VTC5//AtGulLO2 GO:0019853 L-ascorbic acid biosynthetic process BP 0.0416601480678488 VTC5//AtGulLO2 GO:0044038 cell wall macromolecule biosynthetic pro... BP 0.0525832946180376 ATPRR1//GAUT14//AtGXMT1//ATKDSA2//AtkdsA1//AT2G27740 GO:0070589 cellular component macromolecule biosynt... BP 0.0525832946180376 ATPRR1//GAUT14//AtGXMT1//ATKDSA2//AtkdsA1//AT2G27740 GO:0070592 cell wall polysaccharide biosynthetic pr... BP 0.0525832946180376 ATPRR1//GAUT14//AtGXMT1//ATKDSA2//AtkdsA1//AT2G27740 GO:0009694 jasmonic acid metabolic process BP 0.0557985258437225 ATSNAP33//VTC5//ATPGIP2//CORI3//GLB1//AOC4//JAZ5 GO:0005976 polysaccharide metabolic process BP 0.0559788734092797 XTH15//ATPRR1//GAUT14//APO2//AtPLR1//RGP4//EXGT-A4//AT3G56010//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//AtGXMT1//APG2//ATKDSA2//AtkdsA1//NHL12//ARP2//AT2G27740 GO:0009856 pollination BP 0.0576354498308667 GAUT14//AT5G39870//ACT12//AT4G26470//AT3G12000//AGL7//AT1G11340//ATKDSA2//AtkdsA1//AteIF3f GO:0044706 multi-multicellular organism process BP 0.0576354498308667 GAUT14//AT5G39870//ACT12//AT4G26470//AT3G12000//AGL7//AT1G11340//ATKDSA2//AtkdsA1//AteIF3f GO:0010383 cell wall polysaccharide metabolic proce... BP 0.0582031961441299 ATPRR1//GAUT14//AtGXMT1//ATKDSA2//AtkdsA1//ARP2//AT2G27740 GO:0010675 regulation of cellular carbohydrate meta... BP 0.0584976368594185 AFP4//AT2G25450 GO:0009311 oligosaccharide metabolic process BP 0.058782078394626 APO2//AtPLR1//AT3G56310//AT3G56010//LSF2//AT3G09050//AT2G43530//APG2//NHL12 GO:0006972 hyperosmotic response BP 0.0629084207123022 VTC5//AT5G39730//AT4G30650//CORI3//AT3G23600//AT3G05640//ATHVA22A//JAZ5//ATERF3 GO:0009407 toxin catabolic process BP 0.0632022234497592 ATGSTU9//ATGSTT1//ATGPX7//AT4G26470//ATGSTU16//ATGPX1//ATGSTU6 GO:0090487 secondary metabolite catabolic process BP 0.0632022234497592 ATGSTU9//ATGSTT1//ATGPX7//AT4G26470//ATGSTU16//ATGPX1//ATGSTU6 GO:0000271 polysaccharide biosynthetic process BP 0.067381775407395 ATPRR1//GAUT14//APO2//AtPLR1//RGP4//AT3G56010//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//AtGXMT1//APG2//ATKDSA2//AtkdsA1//NHL12//AT2G27740 GO:0090329 regulation of DNA-dependent DNA replicat... BP 0.0676509733152171 ABP//AT3G02820 GO:0044070 regulation of anion transport BP 0.070612876227428 FLS2//AT4G26470//AtGDU4 GO:0055076 transition metal ion homeostasis BP 0.070612876227428 BHLH101//ATMT-1//ATCDF1 GO:0006073 cellular glucan metabolic process BP 0.0738440629365974 XTH15//APO2//AtPLR1//RGP4//EXGT-A4//AT3G56010//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//APG2//NHL12//ARP2 GO:0044042 glucan metabolic process BP 0.0738440629365974 XTH15//APO2//AtPLR1//RGP4//EXGT-A4//AT3G56010//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//APG2//NHL12//ARP2 GO:0006498 N-terminal protein lipidation BP 0.0745340123194604 XTH15//ATSNAP33//AT3G61930//AT3G49370//CST//AT4G26470//AT3G21400//AT1G10530//AT3G21680//AT3G01520//PP2A-1//AT2G17210//AtHBP2 GO:0006499 N-terminal protein myristoylation BP 0.0745340123194604 XTH15//ATSNAP33//AT3G61930//AT3G49370//CST//AT4G26470//AT3G21400//AT1G10530//AT3G21680//AT3G01520//PP2A-1//AT2G17210//AtHBP2 GO:0018377 protein myristoylation BP 0.0745340123194604 XTH15//ATSNAP33//AT3G61930//AT3G49370//CST//AT4G26470//AT3G21400//AT1G10530//AT3G21680//AT3G01520//PP2A-1//AT2G17210//AtHBP2 GO:0009404 toxin metabolic process BP 0.0797242095527767 ATGSTU9//ATGSTT1//ATGPX7//AT4G26470//ATGSTU16//ATGPX1//ATGSTU6 GO:0031365 N-terminal protein amino acid modificati... BP 0.0801107768680692 XTH15//ATSNAP33//AT3G61930//AT3G49370//CST//AT4G26470//AT3G21400//AT1G10530//AT3G21680//AT3G01520//PP2A-1//AT2G17210//AtHBP2 GO:0006497 protein lipidation BP 0.0820274853170543 XTH15//ATSNAP33//AT3G61930//AT3G49370//CST//AT4G26470//AT3G21400//AT1G10530//AT3G21680//AT3G01520//PP2A-1//AT2G17210//AtHBP2 GO:0042157 lipoprotein metabolic process BP 0.0820274853170543 XTH15//ATSNAP33//AT3G61930//AT3G49370//CST//AT4G26470//AT3G21400//AT1G10530//AT3G21680//AT3G01520//PP2A-1//AT2G17210//AtHBP2 GO:0042158 lipoprotein biosynthetic process BP 0.0820274853170543 XTH15//ATSNAP33//AT3G61930//AT3G49370//CST//AT4G26470//AT3G21400//AT1G10530//AT3G21680//AT3G01520//PP2A-1//AT2G17210//AtHBP2 GO:0043543 protein acylation BP 0.0820274853170543 XTH15//ATSNAP33//AT3G61930//AT3G49370//CST//AT4G26470//AT3G21400//AT1G10530//AT3G21680//AT3G01520//PP2A-1//AT2G17210//AtHBP2 GO:0044703 multi-organism reproductive process BP 0.0827670104913023 GAUT14//AT5G39870//ACT12//AT4G26470//AT3G12000//AGL7//ATORC4//APG2//AT1G11340//ATKDSA2//AtkdsA1//AteIF3f GO:0009269 response to desiccation BP 0.0828118813279013 AT3G44380//ATHVA22A//ALDH7B4 GO:0009838 abscission BP 0.0828118813279013 CST//AT3G02480//sks16 GO:1901136 carbohydrate derivative catabolic proces... BP 0.0828118813279013 AT3G56310//ChiC//ESM1 GO:0006720 isoprenoid metabolic process BP 0.0847138720628218 AT5G58784//AT3G56010//PSRP2//AT2S2//CORI3//GLB1//ABA4//ESM1//IDI2//ATMYB90//ISPF//AT1G68250//emb2184//AT1G78500//XERICO//PSB29 GO:0009414 response to water deprivation BP 0.0848316504491625 ATDI21//VTC5//AT3G44380//AtRbcX1//ATDI19//AT3G02480//AT3G05640//ATHVA22A//JAZ5//ATERF3//ALDH7B4//ATPAL1 GO:0008037 cell recognition BP 0.0872214865891412 AT3G12000//AT1G11340 GO:0009875 pollen-pistil interaction BP 0.0872214865891412 AT3G12000//AT1G11340 GO:0048544 recognition of pollen BP 0.0872214865891412 AT3G12000//AT1G11340 GO:0009695 jasmonic acid biosynthetic process BP 0.0894484559913831 ATSNAP33//VTC5//CORI3//GLB1//AOC4//JAZ5 GO:0098771 inorganic ion homeostasis BP 0.0913022909569814 BHLH101//ATIPK1//ATGLR2.6//ATMT-1//ATCDF1 GO:0072329 monocarboxylic acid catabolic process BP 0.092007209406732 ARS5//AT3G56310//UMAMIT6//AT3G03330//ATPAL1//ATCDF1//AT2G26230 GO:0009250 glucan biosynthetic process BP 0.0920077841996823 APO2//AtPLR1//RGP4//AT3G56010//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//APG2//NHL12 GO:0009808 lignin metabolic process BP 0.0940311132421925 ATCAD7//AtCRL2//AtGXMT1//ATPAL1 GO:0032787 monocarboxylic acid metabolic process BP 0.0970965002997505 SAG101//CDR1//ATSNAP33//VTC5//ETFBETA//ARS5//AT5G39730//AT5G38020//GDH2//ATPGIP2//AT3G56310//AT3G56010//UMAMIT6//PSRP2//CST//CORI3//Prx37//GLB1//ABA4//ESM1//ABCC7//AT3G28940//AT3G23600//IDI2//ATG8H//AT3G03330//AOC4//ISPF//AT1G08110//JAZ5//emb2184//XERICO//ATPAL1//PSB29//ATCDF1//AT2G26230 GO:0043255 regulation of carbohydrate biosynthetic ... BP 0.0975630439861635 AFP4//AT2G25450 GO:0009415 response to water BP 0.0978922613301785 ATDI21//VTC5//AT3G44380//AtRbcX1//ATDI19//AT3G02480//AT3G05640//ATHVA22A//JAZ5//ATERF3//ALDH7B4//ATPAL1 GO:0009860 pollen tube growth BP 0.0985251119647951 GAUT14//AT5G39870//ACT12//AT4G26470//AGL7//ATKDSA2//AtkdsA1 GO:0010876 lipid localization BP 0.0985251119647951 OLEO3//ATU2AF35B//AT3G56310//AT2S2//AT2S1//AT3G06570//AT1G62510 GO:0010087 phloem or xylem histogenesis BP 0.0991858259392679 CYCD4;1//AT5G38020//EPC1//NET1A GO:0006974 cellular response to DNA damage stimulus BP 0.101355062490486 AT4G17760//ATCOL1//ATCKA1//AT5G44680//AT3G02820//AT3G09250//ATRAD9//ATE2F2 GO:0046364 monosaccharide biosynthetic process BP 0.104221733545952 VTC5//ACT12//AT1G08110//ATKDSA2//AtkdsA1//AtGulLO2 GO:0010155 regulation of proton transport BP 0.104469144997411 APO2//AT5G44680//AT3G19850//ISPF GO:0046283 anthocyanin-containing compound metaboli... BP 0.104469144997411 AtRbcX1//GLB1//ARF10//ATRNS1 GO:0008299 isoprenoid biosynthetic process BP 0.10611040409581 AT5G58784//AT3G56010//PSRP2//AT2S2//CORI3//GLB1//ABA4//ESM1//IDI2//ATMYB90//ISPF//AT1G68250//emb2184//AT1G78500//PSB29 GO:0045736 negative regulation of cyclin-dependent ... BP 0.108228447217895 CYCD4;1//ATCYCD2;1 GO:0046916 cellular transition metal ion homeostasi... BP 0.108228447217895 ATMT-1//ATCDF1 GO:0016051 carbohydrate biosynthetic process BP 0.108353601901146 ATPRR1//GAUT14//APO2//VTC5//AtPLR1//RGP4//AT3G56010//ACT12//LSF2//ESM1//AFP4//AT3G09050//AT2G43530//AT1G08110//AtGXMT1//APG2//ATKDSA2//AtkdsA1//NHL12//AT2G25450//AT2G27740//AtGulLO2 GO:0009617 response to bacterium BP 0.110297825308111 CDR1//ATSNAP33//FLS2//ATIPK1//ATPGIP2//EPC1//AT3G52960//ATCAD7//Prx37//ESM1//AtRLP36//AT3G28940//ATHVA22A//AT1G34750//PSB29 GO:0042537 benzene-containing compound metabolic pr... BP 0.110774696062204 SAG101//CDR1//ATSNAP33//GDH2//CST//ABCC7//ATG8H//ATPAL1 GO:0009664 plant-type cell wall organization BP 0.113276339245848 GAUT14//AT5G39870//ACT12//ATEXP20//AT4G26470//AT3G02480//AGL7//ATKDSA2//AtkdsA1//ARP2 GO:0000904 cell morphogenesis involved in different... BP 0.114162336073591 GAUT14//AT5G39870//ACT12//AT4G26470//CML42//AGL7//ATE2F2//ATKDSA2//AtkdsA1 GO:0098656 anion transmembrane transport BP 0.116827561528426 FLS2//AT4G26470//AT2G43930 GO:0006464 cellular protein modification process BP 0.117305731090464 XTH15//ATCKA1//CYCD4;1//CIP8//ATSNAP33//APO2//FLS2//AT5G44680//ATU2AF35B//AT5G41680//ATMSRA3//ATMSRA2//ATPGIP2//AT5G03880//UBQ3//AT3G61930//AT3G52960//AT3G51470//AT3G49370//CST//AT4G34500//AT4G26470//CRK23//AT4G22730//AT4G02800//AT1G18170//LSF2//AT3G21400//AT1G10530//WAKL4//AT3G19850//AT3G21680//AT3G17680//AT3G01520//CYCA3;2//DECOY//ATORC4//APG2//AT1G11340//PP2A-1//AT2G17210//ATCYCD2;1//AT2G13290//PSB29//AT2G42290//AtHBP2//ATEYA//AT2G43930 GO:0036211 protein modification process BP 0.117305731090464 XTH15//ATCKA1//CYCD4;1//CIP8//ATSNAP33//APO2//FLS2//AT5G44680//ATU2AF35B//AT5G41680//ATMSRA3//ATMSRA2//ATPGIP2//AT5G03880//UBQ3//AT3G61930//AT3G52960//AT3G51470//AT3G49370//CST//AT4G34500//AT4G26470//CRK23//AT4G22730//AT4G02800//AT1G18170//LSF2//AT3G21400//AT1G10530//WAKL4//AT3G19850//AT3G21680//AT3G17680//AT3G01520//CYCA3;2//DECOY//ATORC4//APG2//AT1G11340//PP2A-1//AT2G17210//ATCYCD2;1//AT2G13290//PSB29//AT2G42290//AtHBP2//ATEYA//AT2G43930