GOID	TERM	ONTOLOGY	pValue	Genes
GO:0048831	regulation of shoot system development	BP	0.00270706395603245	ATCAP-E1//atbzip14//AG//CMT3//LYM1//AHK4//AHP5//AT2G40660//AXL//AT2G07170//AtSPL9
GO:0016569	covalent chromatin modification	BP	0.00925756134176855	AT5G17160//ATCAP-E1//PME5//AT3G02640//AT3G02890//CMT3//LYM1//AT2G17930//AT2G40660//AXL//AT2G07170
GO:0051239	regulation of multicellular organismal p...	BP	0.010313446407596	ATCAP-E1//AT4G38660//atbzip14//AtENODL15//AG//ATROPGEF9//ATL8//CMT3//LYM1//AHK4//AHP5//AT2G40660//AXL//AT2G07170//AtSPL9
GO:0050793	regulation of developmental process	BP	0.0112060826779667	BUB3.2//ATCAP-E1//AT4G38660//atbzip14//AtENODL15//AG//ATROPGEF9//ATL8//CMT3//ATS9//LYM1//AHK4//AHP5//AT2G40660//AXL//AT2G07170//AtSPL9
GO:0006346	methylation-dependent chromatin silencin...	BP	0.0129384149076961	ATCAP-E1//AT3G02890//CMT3//AT2G17930//AT2G07170
GO:0016572	histone phosphorylation	BP	0.0142260881080044	AT5G17160//PME5//AT3G02640//CMT3
GO:0016568	chromatin modification	BP	0.0149493313640324	AT5G17160//ATCAP-E1//PME5//AT3G02640//AT3G02890//CMT3//LYM1//AT2G17930//AT2G40660//AXL//AT2G07170
GO:2000026	regulation of multicellular organismal d...	BP	0.0180696438014282	ATCAP-E1//AT4G38660//atbzip14//AtENODL15//AG//ATL8//CMT3//LYM1//AHK4//AHP5//AT2G40660//AXL//AT2G07170//AtSPL9
GO:0009740	gibberellic acid mediated signaling path...	BP	0.0209792166579212	ATGID1B//ABC33//ATGL1//ATGID1A
GO:0010476	gibberellin mediated signaling pathway	BP	0.0209792166579212	ATGID1B//ABC33//ATGL1//ATGID1A
GO:0000041	transition metal ion transport	BP	0.0217369788305502	AT5G59930//PIP2;5//COPT2//NRT1.5//EDA4//GUX5//MLP329//AT2G39410
GO:0071370	cellular response to gibberellin stimulu...	BP	0.0225288642065182	ATGID1B//ABC33//ATGL1//ATGID1A
GO:0006260	DNA replication	BP	0.0232853472594477	BUB3.2//ATCAP-E1//ATBT2//AT4G19130//ATUNG//CMT3//ATS9//AT2G07170//PIRL6
GO:0001708	cell fate specification	BP	0.023443635514281	CLE40//ATGL1//AT1G63200
GO:0048580	regulation of post-embryonic development	BP	0.0240376620861959	ATCAP-E1//atbzip14//AG//CMT3//LYM1//AHK4//AHP5//AT2G40660//AXL//AT2G07170
GO:2000241	regulation of reproductive process	BP	0.0247944390009538	ATCAP-E1//atbzip14//AG//ATROPGEF9//CMT3//LYM1//AT2G40660//AXL//AT2G07170
GO:0006270	DNA replication initiation	BP	0.025821512593953	ATCAP-E1//CMT3//AT2G07170
GO:0009734	auxin-activated signaling pathway	BP	0.0283239620732097	ATBT2//NRT1.5//AXL
GO:0009845	seed germination	BP	0.0288999028585037	ATGID1B//ATGID1A//HGPT//AHK4//AHP5//AXL
GO:0072348	sulfur compound transport	BP	0.0299160121579224	GTR2//AHK4
GO:0016570	histone modification	BP	0.0324522908547524	AT5G17160//ATCAP-E1//PME5//AT3G02640//CMT3//LYM1//AT2G40660//AXL//AT2G07170
GO:0009909	regulation of flower development	BP	0.0325321921729703	ATCAP-E1//atbzip14//AG//CMT3//LYM1//AT2G40660//AXL//AT2G07170
GO:0006863	purine nucleobase transport	BP	0.0336427522644152	AT4G17580//AT5G08090//FLA21//AT4G20470//AT1G15600
GO:0015851	nucleobase transport	BP	0.0336427522644152	AT4G17580//AT5G08090//FLA21//AT4G20470//AT1G15600
GO:0045165	cell fate commitment	BP	0.0337005967940404	CLE40//ATGL1//AT1G63200
GO:0006284	base-excision repair	BP	0.0348274705729206	ATUNG//RAD23A
GO:0008356	asymmetric cell division	BP	0.0348274705729206	CMT3//ANAC009
GO:0031408	oxylipin biosynthetic process	BP	0.0348274705729206	ATPXG2//ATMEPCT
GO:0090351	seedling development	BP	0.0354402688503865	ATGID1B//ATGID1A//HGPT//AHK4//AHP5//AXL
GO:0071365	cellular response to auxin stimulus	BP	0.0395677220181986	ATBT2//NRT1.5//AXL
GO:0006289	nucleotide-excision repair	BP	0.0400266431587094	UVH3//RAD23A
GO:0031407	oxylipin metabolic process	BP	0.0400266431587094	ATPXG2//ATMEPCT
GO:0000160	phosphorelay signal transduction system	BP	0.0422537173178887	GLIP1//AT5G07580//ATGID1B//AHK4//AHP5
GO:1903338	regulation of cell wall organization or ...	BP	0.045497804815137	AT5G65590//AtMYB103
GO:0009755	hormone-mediated signaling pathway	BP	0.0493947651516795	GLIP1//AT5G07580//ATGID1B//ATBT2//AT4G22980//ABC33//AT1G34010//ATGL1//ATGID1A//NRT1.5//AHK4//AtPUB23//AHP5//AXL
GO:0045935	positive regulation of nucleobase-contai...	BP	0.0496026308259327	AT4G17810//AT5G65590//PTAC15//OEP6//ATBT2//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL
GO:0051173	positive regulation of nitrogen compound...	BP	0.0519378885095973	AT4G17810//AT5G65590//PTAC15//OEP6//ATBT2//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL
GO:0048584	positive regulation of response to stimu...	BP	0.0527370122929173	GLIP1//ATGID1B//ATGID1A
GO:0006342	chromatin silencing	BP	0.0547977583963306	ATCAP-E1//AT3G02890//CMT3//MOM//AT2G17930//AT2G07170
GO:0010557	positive regulation of macromolecule bio...	BP	0.0555764939312919	AT4G17810//AT5G65590//PTAC15//OEP6//ATBT2//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL
GO:0045814	negative regulation of gene expression, ...	BP	0.0566508493349256	ATCAP-E1//AT3G02890//CMT3//MOM//AT2G17930//AT2G07170
GO:0031328	positive regulation of cellular biosynth...	BP	0.0633496152193281	AT4G17810//AT5G65590//PTAC15//OEP6//ATBT2//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL
GO:0000910	cytokinesis	BP	0.0644374851263202	ATCAP-E1//AtENODL15//PFI//CMT3//AT2G17930//AT2G07170
GO:0006325	chromatin organization	BP	0.0651370753802886	AT5G17160//ATCAP-E1//PME5//AT3G02640//AT3G02890//CMT3//LYM1//AT2G17930//AT2G40660//AXL//AT2G07170
GO:0002252	immune effector process	BP	0.0664778273850428	ATCAP-E1//GLIP1//AT3G63380//AT3G02890//AtPUB23//AT2G17930
GO:0048522	positive regulation of cellular process	BP	0.066525450847919	AT4G17810//AT5G65590//PTAC15//OEP6//ATGID1B//ATBT2//atbzip14//AtFBA7//ATGID1A//AtMYB103//ANAC012//ANAC009//AXL
GO:0031537	regulation of anthocyanin metabolic proc...	BP	0.0698072847167405	AHK4//AHP5
GO:0043161	proteasome-mediated ubiquitin-dependent ...	BP	0.0712155288152056	BUB3.2//PBD1//ATS9//RAD23A
GO:0009736	cytokinin-activated signaling pathway	BP	0.0717597396544832	AT1G34010//AHK4//AHP5
GO:0071368	cellular response to cytokinin stimulus	BP	0.0717597396544832	AT1G34010//AHK4//AHP5
GO:0010604	positive regulation of macromolecule met...	BP	0.0717948235145908	AT4G17810//AT5G65590//PTAC15//OEP6//ATBT2//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL
GO:0032870	cellular response to hormone stimulus	BP	0.0721414565715249	GLIP1//AT5G07580//ATGID1B//ATBT2//AT4G22980//ABC33//AT1G34010//ATGL1//ATGID1A//NRT1.5//AHK4//AtPUB23//AHP5//AXL
GO:0009739	response to gibberellin	BP	0.0728598456456989	ATMIXTA//ATGID1B//ABC33//ATGL1//ATGID1A
GO:0071495	cellular response to endogenous stimulus	BP	0.0745034568656603	GLIP1//AT5G07580//ATGID1B//ATBT2//AT4G22980//ABC33//AT1G34010//ATGL1//ATGID1A//NRT1.5//AHK4//AtPUB23//AHP5//AXL
GO:0046488	phosphatidylinositol metabolic process	BP	0.0754121770030737	AT5G20120//AT5G55290//AT3G48185//AT1G12730//ATPIPK11
GO:0048653	anther development	BP	0.0758868511079833	AT3G62960//AT4G38660//AtSPL9
GO:0031325	positive regulation of cellular metaboli...	BP	0.0793527438330957	AT4G17810//AT5G65590//PTAC15//OEP6//ATBT2//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL
GO:0006511	ubiquitin-dependent protein catabolic pr...	BP	0.0794123414096402	ATUBP5//BUB3.2//AT4G33160//PBD1//ATS9//RAD23A//AT2G16810//ASK19
GO:0045893	positive regulation of transcription, DN...	BP	0.0824558660431208	AT4G17810//AT5G65590//PTAC15//OEP6//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL
GO:0051254	positive regulation of RNA metabolic pro...	BP	0.0824558660431208	AT4G17810//AT5G65590//PTAC15//OEP6//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL
GO:1902680	positive regulation of RNA biosynthetic ...	BP	0.0824558660431208	AT4G17810//AT5G65590//PTAC15//OEP6//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL
GO:1903508	positive regulation of nucleic acid-temp...	BP	0.0824558660431208	AT4G17810//AT5G65590//PTAC15//OEP6//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL
GO:0009809	lignin biosynthetic process	BP	0.0832250852490892	AtMYB103//ANAC012
GO:1901136	carbohydrate derivative catabolic proces...	BP	0.0832250852490892	AT4G29570//AT3G07690
GO:0019941	modification-dependent protein catabolic...	BP	0.0850171331240572	ATUBP5//BUB3.2//AT4G33160//PBD1//ATS9//RAD23A//AT2G16810//ASK19
GO:0043632	modification-dependent macromolecule cat...	BP	0.0850171331240572	ATUBP5//BUB3.2//AT4G33160//PBD1//ATS9//RAD23A//AT2G16810//ASK19
GO:0044767	single-organism developmental process	BP	0.0863712181094716	AT4G17810//ATHDG11//BUB3.2//AT5G65590//PSL5//ATCAP-E1//AGP14//ATGEX1//EDA41//GFA2//MSP2//ATMIXTA//CLE40//OEP6//AT3G62960//ATGID1B//ATPSK3//ATBT2//AT4G38660//atbzip14//DAW1//AtENODL15//AT4G29030//AtFBA7//AG//ATROPGEF9//ATGL1//EMB2743//AT3G02890//ATGID1A//ARA-2//AT1G63200//PFI//ATL8//CMT3//ATS9//LYM1//HGPT//ANAC012//EDA4//AHK4//ANAC009//AHP5//AT2G17930//AT2G40660//AXL//MLP328//AT2G07170//SNZ//TET8//AtSPL9
GO:0071310	cellular response to organic substance	BP	0.0865087750751874	ATCAP-E1//GLIP1//AT5G07580//AT3G63380//ATGID1B//ATBT2//atbzip14//AT4G22980//ABC33//AT1G34010//ATGL1//AT3G02890//ATGID1A//NRT1.5//AHK4//AtPUB23//AHP5//AT2G17930//AXL
GO:0010267	production of ta-siRNAs involved in RNA ...	BP	0.088874441253785	ATCAP-E1//AT3G02890//AT2G17930
GO:0000741	karyogamy	BP	0.0902052624068867	EDA41//GFA2
GO:0048284	organelle fusion	BP	0.0902052624068867	EDA41//GFA2
GO:0006275	regulation of DNA replication	BP	0.0941787557547413	ATCAP-E1//ATBT2//CMT3//AT2G07170
GO:0048638	regulation of developmental growth	BP	0.0963875845677572	BUB3.2//AT4G38660//AtENODL15//ATROPGEF9//ATL8//ATS9
GO:0022603	regulation of anatomical structure morph...	BP	0.0977146257581183	BUB3.2//ATROPGEF9//ATS9//AtSPL9
GO:0010628	positive regulation of gene expression	BP	0.100736014667325	AT4G17810//AT5G65590//PTAC15//OEP6//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL
GO:0010050	vegetative phase change	BP	0.104649850528243	AT3G02890//AT2G17930
GO:0051510	regulation of unidimensional cell growth	BP	0.10751806538765	BUB3.2//ATROPGEF9//ATS9
GO:0048367	shoot system development	BP	0.107647800772582	AT4G17810//AT5G65590//ATCAP-E1//OEP6//AT3G62960//ATGID1B//AT4G38660//atbzip14//AT4G29030//AtFBA7//AG//ATGID1A//CMT3//LYM1//AHK4//AHP5//AT2G40660//AXL//AT2G07170//AtSPL9
GO:0072527	pyrimidine-containing compound metabolic...	BP	0.10868707873619	AT4G29570//AT1G23280//AT2G40660//AT2G34890
GO:0010029	regulation of seed germination	BP	0.112092242311062	AHK4//AHP5
GO:0009553	embryo sac development	BP	0.116057358402155	ATGEX1//EDA41//GFA2//ATBT2//EDA4
GO:0006661	phosphatidylinositol biosynthetic proces...	BP	0.116296790908136	AT5G20120//AT5G55290//AT3G48185//AT1G12730
GO:0006414	translational elongation	BP	0.119667381482488	AT2G43640//AT1G35550
GO:1900140	regulation of seedling development	BP	0.119667381482488	AHK4//AHP5
GO:0043069	negative regulation of programmed cell d...	BP	0.120187144710773	AT4G17580//ATGID1B//AtPUB23//AHP5
GO:0032502	developmental process	BP	0.121849089704567	AT4G17810//ATHDG11//BUB3.2//AT5G65590//PSL5//ATCAP-E1//AGP14//ATGEX1//EDA41//GFA2//MSP2//ATMIXTA//CLE40//OEP6//AT3G62960//ATGID1B//ATPSK3//ATBT2//AT4G38660//atbzip14//DAW1//AtENODL15//AT4G29030//AtFBA7//AG//ATROPGEF9//ATGL1//EMB2743//AT3G02890//ATGID1A//ARA-2//AT1G63200//PFI//ATL8//CMT3//ATS9//LYM1//HGPT//ANAC012//EDA4//AHK4//ANAC009//AHP5//AT2G17930//AT2G40660//AXL//MLP328//AT2G07170//SNZ//TET8//AtSPL9
GO:0022402	cell cycle process	BP	0.122250586137607	BUB3.2//ATCAP-E1//AtENODL15//PFI//CMT3//ATS9//AT2G17930//AXL//AT2G07170//PIRL6
GO:0040008	regulation of growth	BP	0.123543775212954	BUB3.2//AT4G38660//AtENODL15//ATROPGEF9//ATL8//ATS9
GO:0010106	cellular response to iron ion starvation	BP	0.124133141034463	PIP2;5//NRT1.5//GUX5//MLP329
GO:0048443	stamen development	BP	0.124133141034463	AT3G62960//AT4G38660//AG//AtSPL9
GO:0048466	androecium development	BP	0.124133141034463	AT3G62960//AT4G38660//AG//AtSPL9
GO:0009312	oligosaccharide biosynthetic process	BP	0.127365281159945	ATGID1B//ATGID1A
GO:0022604	regulation of cell morphogenesis	BP	0.127533342716802	BUB3.2//ATROPGEF9//ATS9
GO:0060548	negative regulation of cell death	BP	0.128133735828313	AT4G17580//ATGID1B//AtPUB23//AHP5
GO:0043207	response to external biotic stimulus	BP	0.130922475337319	PSL5//ATCAP-E1//AT5G46040//GLIP1//AT3G63380//ATGID1B//AT4G38660//AT4G22980//CXC750//AT3G14470//RLK902//AT3G02890//AT3G07690//AT1G19320//AT1G06100//AHK4//AtPUB23//AHP5//AT2G17930//TET8
GO:0051707	response to other organism	BP	0.130922475337319	PSL5//ATCAP-E1//AT5G46040//GLIP1//AT3G63380//ATGID1B//AT4G38660//AT4G22980//CXC750//AT3G14470//RLK902//AT3G02890//AT3G07690//AT1G19320//AT1G06100//AHK4//AtPUB23//AHP5//AT2G17930//TET8
GO:0006261	DNA-dependent DNA replication	BP	0.132187865020324	ATCAP-E1//ATUNG//CMT3//AT2G07170
GO:0009607	response to biotic stimulus	BP	0.132297474461383	PSL5//ATCAP-E1//AT5G46040//GLIP1//AT3G63380//ATGID1B//AT4G38660//AT4G22980//CXC750//AT3G14470//RLK902//AT3G02890//AT3G07690//AT1G19320//AT1G06100//AHK4//AtPUB23//AHP5//AT2G17930//TET8
GO:0009165	nucleotide biosynthetic process	BP	0.135358855641031	NAPRT1//AT3G63380//HGPT//AT1G23280//AT2G40660//AT2G34890
GO:0009891	positive regulation of biosynthetic proc...	BP	0.136791018178865	AT4G17810//AT5G65590//PTAC15//OEP6//ATBT2//atbzip14//AtFBA7//AtMYB103//ANAC012//AXL