GOID TERM ONTOLOGY pValue Genes GO:0006779 porphyrin-containing compound biosynthet... BP 0.00226588344786223 ELIP//AT1G76450//ATSIRB//LIP1//AT2G44920 GO:0006778 porphyrin-containing compound metabolic ... BP 0.00228868519053184 ATPTR1//ELIP//AT1G76450//ATSIRB//LIP1//AT2G44920 GO:0033013 tetrapyrrole metabolic process BP 0.00228868519053184 ATPTR1//ELIP//AT1G76450//ATSIRB//LIP1//AT2G44920 GO:0033014 tetrapyrrole biosynthetic process BP 0.00237223588698844 ELIP//AT1G76450//ATSIRB//LIP1//AT2G44920 GO:0015994 chlorophyll metabolic process BP 0.00660229768155579 ATPTR1//ELIP//AT1G76450//LIP1//AT2G44920 GO:0015995 chlorophyll biosynthetic process BP 0.00752101490324926 ELIP//AT1G76450//LIP1//AT2G44920 GO:0019344 cysteine biosynthetic process BP 0.0106213060023772 AT5G13140//ATCYP20-2//GAMMA-TIP2//AT1G01630//LIP1 GO:0006534 cysteine metabolic process BP 0.0112603564407914 AT5G13140//ATCYP20-2//GAMMA-TIP2//AT1G01630//LIP1 GO:0009070 serine family amino acid biosynthetic pr... BP 0.0133341717040393 AT5G13140//ATCYP20-2//GAMMA-TIP2//AT1G01630//LIP1 GO:0010054 trichoblast differentiation BP 0.0153032617098162 AT5G13140//EMB40//AT3G49960//AT4G26010//GAMMA-TIP2//AtGH9C1 GO:0010053 root epidermal cell differentiation BP 0.0163199224108084 AT5G13140//EMB40//AT3G49960//AT4G26010//GAMMA-TIP2//AtGH9C1 GO:0009269 response to desiccation BP 0.0173547540877013 ATRD22//ERD14 GO:0090627 plant epidermal cell differentiation BP 0.017747053216838 AT5G13140//EMB40//AT3G49960//AT4G26010//GAMMA-TIP2//AtGH9C1 GO:0042440 pigment metabolic process BP 0.0192579814182356 ATPTR1//ELIP//AT1G76450//ATSIRB//LIP1//AT2G44920 GO:0016226 iron-sulfur cluster assembly BP 0.0221838663103003 SSR16//AT3G28460//AT3G06980 GO:0031163 metallo-sulfur cluster assembly BP 0.0221838663103003 SSR16//AT3G28460//AT3G06980 GO:0046148 pigment biosynthetic process BP 0.023641736679312 ELIP//AT1G76450//ATSIRB//LIP1//AT2G44920 GO:0051188 cofactor biosynthetic process BP 0.0275787106387961 ELIP//AT1G76450//ATSIRB//LIP1//AT2G44920 GO:0009069 serine family amino acid metabolic proce... BP 0.02938653724065 AT5G13140//ATCYP20-2//GAMMA-TIP2//AT1G01630//LIP1 GO:0048518 positive regulation of biological proces... BP 0.0297490463476149 AT5G08450//HCT//EMB40//TCP2//AT3G28460//ELIP//AtLa2//AT1G70500//LIP1//AT2G27290//AT2G44920 GO:0000271 polysaccharide biosynthetic process BP 0.0412573972690989 AT5G13140//AT5G08450//AT3G45050//GAMMA-TIP2//AT1G76450//AtRABA6a//AT1G70500 GO:0009657 plastid organization BP 0.041294025059772 AT3G45050//SSR16//TCP2//AT3G28460//AT3G06980//AT1G76450 GO:0000723 telomere maintenance BP 0.0427460370266061 AT5G08450//ATKU80 GO:0032200 telomere organization BP 0.0427460370266061 AT5G08450//ATKU80 GO:0060249 anatomical structure homeostasis BP 0.0450559335298621 AT5G08450//ATKU80 GO:0010015 root morphogenesis BP 0.0459586879517549 AT5G13140//EMB40//AT3G49960//AT4G26010//GAMMA-TIP2//AtGH9C1 GO:0048522 positive regulation of cellular process BP 0.0488769699050791 AT5G08450//EMB40//TCP2//AT3G28460//AtLa2//AT1G70500//LIP1//AT2G27290 GO:0000097 sulfur amino acid biosynthetic process BP 0.0498874722790266 AT5G13140//ATCYP20-2//GAMMA-TIP2//AT1G01630//LIP1 GO:0030154 cell differentiation BP 0.0523443423924389 AT5G13140//EMB40//AT3G49960//IYO//AT4G26010//TCP2//GAMMA-TIP2//AT1G76370//AtGH9C1//LIP1//AT2G27290 GO:0010638 positive regulation of organelle organiz... BP 0.0523536822462565 AT5G08450//EMB40//AT1G70500 GO:0016926 protein desumoylation BP 0.0547372173819042 AT5G08450//AT2G38180 GO:0051130 positive regulation of cellular componen... BP 0.0553311351389631 AT5G08450//EMB40//AT1G70500 GO:0010413 glucuronoxylan metabolic process BP 0.0730995140456234 AT5G08450//AtRABA6a//AT1G70500 GO:0045492 xylan biosynthetic process BP 0.0730995140456234 AT5G08450//AtRABA6a//AT1G70500 GO:0000096 sulfur amino acid metabolic process BP 0.0738807223524788 AT5G13140//ATCYP20-2//GAMMA-TIP2//AT1G01630//LIP1 GO:1901607 alpha-amino acid biosynthetic process BP 0.0750196179467662 AT5G13140//ATCYP20-2//GLN1;4//GAMMA-TIP2//AT1G01630//LIP1 GO:0044038 cell wall macromolecule biosynthetic pro... BP 0.0783381635785254 AT5G08450//AtRABA6a//AT1G70500 GO:0045491 xylan metabolic process BP 0.0783381635785254 AT5G08450//AtRABA6a//AT1G70500 GO:0070589 cellular component macromolecule biosynt... BP 0.0783381635785254 AT5G08450//AtRABA6a//AT1G70500 GO:0070592 cell wall polysaccharide biosynthetic pr... BP 0.0783381635785254 AT5G08450//AtRABA6a//AT1G70500 GO:0042592 homeostatic process BP 0.0804368325741472 AT5G08450//HCT//AT4G33040//GAMMA-TIP2//ATKU80 GO:0009744 response to sucrose BP 0.083737163682947 HHP1//GLN1;4//ELIP GO:0006636 unsaturated fatty acid biosynthetic proc... BP 0.0845588989874965 LIP1//AT2G44920 GO:0010218 response to far red light BP 0.0845588989874965 ELIP//AT1G76450 GO:0033559 unsaturated fatty acid metabolic process BP 0.0845588989874965 LIP1//AT2G44920 GO:0005976 polysaccharide metabolic process BP 0.0854135281174014 AT5G13140//AT5G08450//AT3G45050//GAMMA-TIP2//AT1G76450//AtRABA6a//AT1G70500 GO:0090558 plant epidermis development BP 0.0854135281174014 AT5G13140//EMB40//AT3G49960//AT4G26010//GAMMA-TIP2//AT3G06980//AtGH9C1 GO:0010410 hemicellulose metabolic process BP 0.0855716930994936 AT5G08450//AtRABA6a//AT1G70500 GO:0034285 response to disaccharide BP 0.0874233729468133 HHP1//GLN1;4//ELIP GO:0070646 protein modification by small protein re... BP 0.0874233729468133 RPN13//AT5G08450//AT2G38180 GO:0042793 transcription from plastid promoter BP 0.0904153203844841 AT3G28460//AT1G76450 GO:0009414 response to water deprivation BP 0.0917001194487246 AT1G32220//ATRD22//LTP6//ERD14 GO:1901566 organonitrogen compound biosynthetic pro... BP 0.0917255411593744 AT5G13140//ATCYP20-2//GLN1;4//GAMMA-TIP2//ELIP//AT1G76450//AT1G01630//ATSIRB//SPDS1//LIP1//AT2G44920 GO:0006596 polyamine biosynthetic process BP 0.0929007641688649 172_ GO:0008216 spermidine metabolic process BP 0.0929007641688649 172_ GO:0010030 positive regulation of seed germination BP 0.0929007641688649 321_ GO:0010252 auxin homeostasis BP 0.0929007641688649 639_ GO:0032101 regulation of response to external stimu... BP 0.0929007641688649 360_ GO:0045037 protein import into chloroplast stroma BP 0.0929007641688649 430_ GO:0090056 regulation of chlorophyll metabolic proc... BP 0.0929007641688649 321_ GO:0009415 response to water BP 0.096097885111824 AT1G32220//ATRD22//LTP6//ERD14 GO:0010114 response to red light BP 0.0963878194655757 ELIP//AT1G76450 GO:0048731 system development BP 0.0986727487836707 AT5G13140//AT5G08450//AT5G51170//EMB40//AT3G49960//SSR16//AT4G33040//AT4G26010//TCP2//GAMMA-TIP2//AT3G28460//AT3G06035//AT3G06980//AT1G70500//AtGH9C1//AT1G15920//ATMST2//LIP1//AT2G27290//AT2G38180 GO:0006302 double-strand break repair BP 0.0994155397107351 ODB2//ATKU80 GO:0051193 regulation of cofactor metabolic process BP 0.101706746309913 321_ GO:1901401 regulation of tetrapyrrole metabolic pro... BP 0.101706746309913 321_ GO:0007155 cell adhesion BP 0.102469835188259 RPN13//EMB40 GO:0022610 biological adhesion BP 0.102469835188259 RPN13//EMB40 GO:0009888 tissue development BP 0.104382624980382 AT5G13140//AT5G08450//EMB40//AT3G49960//AT4G26010//GAMMA-TIP2//AT3G06035//AT3G06980//AtRABA6a//AT1G70500//AtGH9C1 GO:0010383 cell wall polysaccharide metabolic proce... BP 0.106845183719428 AT5G08450//AtRABA6a//AT1G70500 GO:0048513 organ development BP 0.107411352505964 AT5G13140//AT5G08450//EMB40//AT3G49960//SSR16//AT4G33040//AT4G26010//TCP2//GAMMA-TIP2//AT3G06035//AT1G70500//AtGH9C1//LIP1//AT2G27290 GO:0006783 heme biosynthetic process BP 0.110428040035059 417_ GO:0030865 cortical cytoskeleton organization BP 0.110428040035059 998_ GO:0009408 response to heat BP 0.115049640405453 ELIP//ATKU80//ERD14 GO:0022622 root system development BP 0.118441132560573 AT5G13140//EMB40//AT3G49960//AT4G26010//GAMMA-TIP2//AtGH9C1 GO:0048364 root development BP 0.118441132560573 AT5G13140//EMB40//AT3G49960//AT4G26010//GAMMA-TIP2//AtGH9C1 GO:0071483 cellular response to blue light BP 0.119065452122289 321_ GO:0051186 cofactor metabolic process BP 0.122032939757991 ATPTR1//ELIP//AT1G76450//ATSIRB//LIP1//AT2G44920 GO:0006766 vitamin metabolic process BP 0.124529373375604 ATSIRB//LIP1 GO:0042168 heme metabolic process BP 0.127619781737078 417_ GO:0008652 cellular amino acid biosynthetic process BP 0.128139040726074 AT5G13140//ATCYP20-2//GLN1;4//GAMMA-TIP2//AT1G01630//LIP1 GO:0035556 intracellular signal transduction BP 0.130198426162627 ATPLC1//AtPFA-DSP4//ATEXO70D3//AtRABA6a//AT2G42060 GO:0009750 response to fructose BP 0.131028413424437 GLN1;4//GAMMA-TIP2 GO:0009825 multidimensional cell growth BP 0.131028413424437 AT5G13140//GAMMA-TIP2 GO:0006081 cellular aldehyde metabolic process BP 0.133065002448599 AT3G06980//AT1G76450//SKIP16//LIP1//AT2G44920 GO:0006979 response to oxidative stress BP 0.13450903918715 AT1G32220//AT3G49960//AT4G26010//AT4G12000//ATSIRB GO:0009668 plastid membrane organization BP 0.138769269475189 AT3G45050//SSR16//AT1G76450 GO:0009965 leaf morphogenesis BP 0.138769269475189 TCP2//LIP1//AT2G27290 GO:0010027 thylakoid membrane organization BP 0.138769269475189 AT3G45050//SSR16//AT1G76450 GO:0080167 response to karrikin BP 0.144252080368795 ELIP//AT3G11600 GO:0006904 vesicle docking involved in exocytosis BP 0.144482352574876 010_ GO:1902531 regulation of intracellular signal trans... BP 0.144482352574876 360_ GO:0033692 cellular polysaccharide biosynthetic pro... BP 0.1463137229661 AT5G08450//AT3G45050//AT1G76450//AtRABA6a//AT1G70500 GO:0009637 response to blue light BP 0.150966247656708 ELIP//AT1G76450 GO:0043473 pigmentation BP 0.150966247656708 AT5G13140//GAMMA-TIP2 GO:0043476 pigment accumulation BP 0.150966247656708 AT5G13140//GAMMA-TIP2 GO:0043478 pigment accumulation in response to UV l... BP 0.150966247656708 AT5G13140//GAMMA-TIP2 GO:0043479 pigment accumulation in tissues in respo... BP 0.150966247656708 AT5G13140//GAMMA-TIP2 GO:0043480 pigment accumulation in tissues BP 0.150966247656708 AT5G13140//GAMMA-TIP2 GO:0043481 anthocyanin accumulation in tissues in r... BP 0.150966247656708 AT5G13140//GAMMA-TIP2