GOID TERM ONTOLOGY pValue Genes GO:0009311 oligosaccharide metabolic process BP 0.00360339100212323 ATTPS5//AT3G09050//AT1G76450//RGL GO:0009312 oligosaccharide biosynthetic process BP 0.0043622346499635 ATTPS5//RGL GO:0009688 abscisic acid biosynthetic process BP 0.00537880982550988 ABA3//AT3G59580 GO:0043289 apocarotenoid biosynthetic process BP 0.00537880982550988 ABA3//AT3G59580 GO:1902645 tertiary alcohol biosynthetic process BP 0.00537880982550988 ABA3//AT3G59580 GO:0009687 abscisic acid metabolic process BP 0.0064932474290469 ABA3//AT3G59580 GO:0043288 apocarotenoid metabolic process BP 0.0064932474290469 ABA3//AT3G59580 GO:1902644 tertiary alcohol metabolic process BP 0.0064932474290469 ABA3//AT3G59580 GO:0016106 sesquiterpenoid biosynthetic process BP 0.00708647211419408 ABA3//AT3G59580 GO:0000023 maltose metabolic process BP 0.00948218492333022 ATTPS5//AT3G09050//AT1G76450 GO:0006714 sesquiterpenoid metabolic process BP 0.00969306289439272 ABA3//AT3G59580 GO:0015994 chlorophyll metabolic process BP 0.0147363110927119 AIRP2//ARR10//AT1G76450 GO:0019252 starch biosynthetic process BP 0.0188301040837057 ATTPS5//AT3G09050//AT1G76450 GO:0005984 disaccharide metabolic process BP 0.0198171135428877 ATTPS5//AT3G09050//AT1G76450 GO:0009887 organ morphogenesis BP 0.0199086954854332 AMT1;1//AT1G68420//RGL//AT1G67570//AT1G13030 GO:0072593 reactive oxygen species metabolic proces... BP 0.0208470835389058 AMT1;1//RGL//AT1G67570//AT2G38180 GO:0006778 porphyrin-containing compound metabolic ... BP 0.0224081782270612 AIRP2//ARR10//AT1G76450 GO:0033013 tetrapyrrole metabolic process BP 0.0224081782270612 AIRP2//ARR10//AT1G76450 GO:0045036 protein targeting to chloroplast BP 0.0278193332091924 ABA3//cpHsc70-2 GO:0072596 establishment of protein localization to... BP 0.0278193332091924 ABA3//cpHsc70-2 GO:0072598 protein localization to chloroplast BP 0.0278193332091924 ABA3//cpHsc70-2 GO:0009845 seed germination BP 0.0287304688557456 ARR10//RGL//QKY GO:0005982 starch metabolic process BP 0.0306028470892132 ATTPS5//AT3G09050//AT1G76450 GO:0090351 seedling development BP 0.0325384074395267 ARR10//RGL//QKY GO:0048444 floral organ morphogenesis BP 0.033197594906345 AT1G68420//RGL//AT1G13030 GO:0048563 post-embryonic organ morphogenesis BP 0.033197594906345 AT1G68420//RGL//AT1G13030 GO:0050665 hydrogen peroxide biosynthetic process BP 0.0335308527090712 AT1G67570//AT2G38180 GO:0016926 protein desumoylation BP 0.0347238728331114 AT1G67570//AT2G38180 GO:1903409 reactive oxygen species biosynthetic pro... BP 0.0359332963338912 AT1G67570//AT2G38180 GO:0042538 hyperosmotic salinity response BP 0.0384005089474684 ABA3//RGL GO:0009756 carbohydrate mediated signaling BP 0.0422191211365996 ABA3//QKY GO:0010182 sugar mediated signaling pathway BP 0.0422191211365996 ABA3//QKY GO:0015995 chlorophyll biosynthetic process BP 0.0422191211365996 ARR10//AT1G76450 GO:0071322 cellular response to carbohydrate stimul... BP 0.0448410047108177 ABA3//QKY GO:0009863 salicylic acid mediated signaling pathwa... BP 0.0470347047969913 ABA3//AMT1;1//RGL GO:0080167 response to karrikin BP 0.0475219285502477 AMT1;1//AT1G25520 GO:0071446 cellular response to salicylic acid stim... BP 0.0486339870701988 ABA3//AMT1;1//RGL GO:0071407 cellular response to organic cyclic comp... BP 0.0518566597867041 ABA3//AMT1;1//EOL1//RGL GO:0005991 trehalose metabolic process BP 0.0540784507317617 348_ GO:0009957 epidermal cell fate specification BP 0.0540784507317617 974_ GO:0051193 regulation of cofactor metabolic process BP 0.0540784507317617 500_ GO:1901401 regulation of tetrapyrrole metabolic pro... BP 0.0540784507317617 500_ GO:0031048 chromatin silencing by small RNA BP 0.0544722656323881 AT1G67570//AT1G13030 GO:0048316 seed development BP 0.0555336253142691 ARR10//EMB2271//RGL//QKY//AT2G47670 GO:0009791 post-embryonic development BP 0.05577227163214 ARR10//EMB2271//AMT1;1//EOL1//AT1G68420//RGL//AT1G67570//QKY//AT1G13030//AT2G47670//AT2G38180 GO:0043069 negative regulation of programmed cell d... BP 0.0573475969917499 ABA3//AMT1;1 GO:0010082 regulation of root meristem growth BP 0.0593255289507326 500_ GO:0045037 protein import into chloroplast stroma BP 0.0593255289507326 325_ GO:0080050 regulation of seed development BP 0.0593255289507326 500_ GO:0010154 fruit development BP 0.0597642455075657 ARR10//EMB2271//RGL//QKY//AT2G47670 GO:0060548 negative regulation of cell death BP 0.0617579321105752 ABA3//AMT1;1 GO:0048608 reproductive structure development BP 0.0631988195930315 ARR10//EMB2271//AT1G68420//RGL//AT1G67570//QKY//AT1G13030//AT2G47670//AT2G38180 GO:0061458 reproductive system development BP 0.0631988195930315 ARR10//EMB2271//AT1G68420//RGL//AT1G67570//QKY//AT1G13030//AT2G47670//AT2G38180 GO:0042743 hydrogen peroxide metabolic process BP 0.0642056537915216 AMT1;1//AT1G67570//AT2G38180 GO:0044802 single-organism membrane organization BP 0.0642369493340973 ABA3//AMT1;1//AT3G09050//AT1G76450 GO:0009653 anatomical structure morphogenesis BP 0.0642612897915465 ATVTI11//ARR10//AMT1;1//EOL1//AT1G68420//RGL//AT1G67570//QKY//AT1G13030 GO:0018208 peptidyl-proline modification BP 0.0645440004304888 442_ GO:0006779 porphyrin-containing compound biosynthet... BP 0.0647609290587228 ARR10//AT1G76450 GO:0033014 tetrapyrrole biosynthetic process BP 0.0647609290587228 ARR10//AT1G76450 GO:0044743 intracellular protein transmembrane impo... BP 0.0662807241370804 ABA3//CAT9 GO:0065002 intracellular protein transmembrane tran... BP 0.0678124825430101 ABA3//CAT9 GO:0071806 protein transmembrane transport BP 0.0678124825430101 ABA3//CAT9 GO:0009886 post-embryonic morphogenesis BP 0.0691598789809153 AMT1;1//AT1G68420//RGL//AT1G13030 GO:0010449 root meristem growth BP 0.0697340184116481 500_ GO:0009250 glucan biosynthetic process BP 0.0698527838497528 ATTPS5//AT3G09050//AT1G76450 GO:0018193 peptidyl-amino acid modification BP 0.0698788566417417 AT4G21060//AT1G67570//AT1G13030//AT2G38180 GO:0044403 symbiosis, encompassing mutualism throug... BP 0.0709111951781983 EOL1//AT1G20640 GO:0061024 membrane organization BP 0.0713285219595564 ABA3//AMT1;1//AT3G09050//AT1G76450 GO:0044419 interspecies interaction between organis... BP 0.0740556935825447 EOL1//AT1G20640 GO:0048523 negative regulation of cellular process BP 0.0741541404658972 ABA3//AMT1;1//RGL//AT1G67570//AT1G13030 GO:0046351 disaccharide biosynthetic process BP 0.0748957353285256 348_ GO:0010162 seed dormancy process BP 0.075644689744859 RGL//QKY GO:0022611 dormancy process BP 0.075644689744859 RGL//QKY GO:0044710 single-organism metabolic process BP 0.0777543222593268 ATTPS5//ABA3//GLN1;4//AIRP2//AT3G59580//AT3G55870//AKR4C11//CYP71B30P//ARR10//AT4G21060//EOL1//AT3G09050//LACS3//AT1G68420//AT1G76450//RGL//AT1G67570//CAT9//SKIP16//AT1G13030//CYP71B28//GGPS4//AT2G38180//AT2G40050 GO:0031047 gene silencing by RNA BP 0.0797482189448009 EOL1//AT1G67570//AT1G13030 GO:0001676 long-chain fatty acid metabolic process BP 0.0800293028133078 737_ GO:0009084 glutamine family amino acid biosynthetic... BP 0.0800293028133078 100_ GO:0051049 regulation of transport BP 0.0837505224353148 AMT1;1//PP2A GO:0016482 cytoplasmic transport BP 0.0849421582163652 ABA3//cpHsc70-2//ATVTI11//AMT1;1//CAT9 GO:0000162 tryptophan biosynthetic process BP 0.0851348717001925 716_ GO:0009913 epidermal cell differentiation BP 0.0851348717001925 974_ GO:0030855 epithelial cell differentiation BP 0.0851348717001925 974_ GO:0046219 indolalkylamine biosynthetic process BP 0.0851348717001925 716_ GO:2000280 regulation of root development BP 0.0851348717001925 500_ GO:2000377 regulation of reactive oxygen species me... BP 0.085402723805795 AMT1;1//RGL GO:0042440 pigment metabolic process BP 0.0870215460980834 AIRP2//ARR10//AT1G76450 GO:0010565 regulation of cellular ketone metabolic ... BP 0.090212592029512 492_ GO:0048445 carpel morphogenesis BP 0.090212592029512 855_ GO:0009743 response to carbohydrate BP 0.0902230359301289 ABA3//GLN1;4//QKY GO:0071310 cellular response to organic substance BP 0.0902233475854324 ABA3//ARR10//AMT1;1//EOL1//RGL//QKY GO:0042180 cellular ketone metabolic process BP 0.0921097002139412 EOL1//SKIP16 GO:0009751 response to salicylic acid BP 0.0945683802084858 ABA3//AMT1;1//RGL GO:0002213 defense response to insect BP 0.0952626130518386 737_ GO:0008544 epidermis development BP 0.0952626130518386 974_ GO:0015696 ammonium transport BP 0.0952626130518386 723_ GO:0009668 plastid membrane organization BP 0.0972387033573602 AT3G09050//AT1G76450 GO:0010027 thylakoid membrane organization BP 0.0972387033573602 AT3G09050//AT1G76450 GO:0008152 metabolic process BP 0.100053941112861 ATTPS5//AT5G20640//ABA3//Cpn60beta3//AT5G55830//cpHsc70-2//GLN1;4//BIN5//AIRP2//AT3G59580//AT3G55870//AKR4C11//CYP71B30P//AT4G39720//ARR10//AT4G27240//AT4G21060//EMB2271//AMT1;1//AT4G10790//EOL1//AT1G48820//AT3G09050//LACS3//AT1G68420//AT1G76450//RGL//AT1G67570//CAT9//SKIP16//QKY//AT1G13030//CYP71B28//XBCP3//PS1//ATZFP11//GGPS4//AT2G38180//AT2G40050 GO:0015802 basic amino acid transport BP 0.100285083232064 723_ GO:0031537 regulation of anthocyanin metabolic proc... BP 0.100285083232064 500_