GOID	TERM	ONTOLOGY	pValue	Genes
GO:0050826	response to freezing	BP	0.000867081643180308	OLE2//PAP85//GLYI8//ATEPR1//AXL
GO:0019915	lipid storage	BP	0.000955608900154866	OLE2//PAP85//GLYI8//ATEPR1//AXL
GO:0032268	regulation of cellular protein metabolic...	BP	0.00185243967832097	AT5G19940//ATAUX2-11//CYCD6;1//ATAB2//ATELF5A-1//ATCYCD1;1//EDA3//AtRLP23
GO:0051235	maintenance of location	BP	0.0019248164775726	OLE2//PAP85//GLYI8//ATEPR1//AXL
GO:0051246	regulation of protein metabolic process	BP	0.00202460387790738	AT5G19940//ATAUX2-11//CYCD6;1//ATAB2//ATELF5A-1//ATCYCD1;1//EDA3//AtRLP23
GO:0019220	regulation of phosphate metabolic proces...	BP	0.00630168458084358	AT5G19940//CYCD6;1//ATAB2//ATCYCD1;1//EDA3//AtRLP23
GO:0051174	regulation of phosphorus metabolic proce...	BP	0.00630168458084358	AT5G19940//CYCD6;1//ATAB2//ATCYCD1;1//EDA3//AtRLP23
GO:0031399	regulation of protein modification proce...	BP	0.00754635824627256	AT5G19940//CYCD6;1//ATAB2//ATCYCD1;1//EDA3//AtRLP23
GO:0045736	negative regulation of cyclin-dependent ...	BP	0.010473975965788	CYCD6;1//ATCYCD1;1
GO:0009639	response to red or far red light	BP	0.0136526448958835	LIP1//APRR1//OLE2//ADG2//ATAB2//ATEPR1//AXL
GO:0009734	auxin-activated signaling pathway	BP	0.0153293698305712	ABCB14//anac021//AXL
GO:0006469	negative regulation of protein kinase ac...	BP	0.0175951580993825	CYCD6;1//ATCYCD1;1
GO:0033673	negative regulation of kinase activity	BP	0.0175951580993825	CYCD6;1//ATCYCD1;1
GO:0051348	negative regulation of transferase activ...	BP	0.0175951580993825	CYCD6;1//ATCYCD1;1
GO:0071901	negative regulation of protein serine/th...	BP	0.0175951580993825	CYCD6;1//ATCYCD1;1
GO:0010876	lipid localization	BP	0.0202544553547536	OLE2//PAP85//AT1G62500//GLYI8//ATEPR1//AXL
GO:0001933	negative regulation of protein phosphory...	BP	0.0203150665887825	CYCD6;1//ATCYCD1;1
GO:0010563	negative regulation of phosphorus metabo...	BP	0.0203150665887825	CYCD6;1//ATCYCD1;1
GO:0042326	negative regulation of phosphorylation	BP	0.0203150665887825	CYCD6;1//ATCYCD1;1
GO:0045936	negative regulation of phosphate metabol...	BP	0.0203150665887825	CYCD6;1//ATCYCD1;1
GO:0071365	cellular response to auxin stimulus	BP	0.0208469309414173	ABCB14//anac021//AXL
GO:0035304	regulation of protein dephosphorylation	BP	0.0209429748569592	AT5G19940//ATAB2//EDA3//AtRLP23
GO:0035303	regulation of dephosphorylation	BP	0.022004056443213	AT5G19940//ATAB2//EDA3//AtRLP23
GO:0009640	photomorphogenesis	BP	0.02259729038083	LIP1//OLE2//ATAB2//ATEPR1//AXL
GO:0006412	translation	BP	0.0251379453841375	ATAUX2-11//AT1G36240//ATAB2//ATNS2//RPS9//ATELF5A-1//AT2G24060
GO:0009110	vitamin biosynthetic process	BP	0.0262381034471175	ATBIOF//ATGLDH
GO:0031400	negative regulation of protein modificat...	BP	0.0262381034471175	CYCD6;1//ATCYCD1;1
GO:0042364	water-soluble vitamin biosynthetic proce...	BP	0.0262381034471175	ATBIOF//ATGLDH
GO:0051640	organelle localization	BP	0.0277986757498288	ADG2//ATAB2//IKU1//EDA3
GO:0009845	seed germination	BP	0.0291341654162509	OLE2//PAP85//GLYI8//ATEPR1//AXL
GO:0006767	water-soluble vitamin metabolic process	BP	0.0294297233881478	ATBIOF//ATGLDH
GO:0090351	seedling development	BP	0.0322663746908439	OLE2//PAP85//GLYI8//ATEPR1//AXL
GO:0045786	negative regulation of cell cycle	BP	0.032767306195709	CYCD6;1//ATCYCD1;1
GO:0009902	chloroplast relocation	BP	0.038792876763552	ADG2//ATAB2//EDA3
GO:0019750	chloroplast localization	BP	0.038792876763552	ADG2//ATAB2//EDA3
GO:0051644	plastid localization	BP	0.038792876763552	ADG2//ATAB2//EDA3
GO:0051667	establishment of plastid localization	BP	0.038792876763552	ADG2//ATAB2//EDA3
GO:0051656	establishment of organelle localization	BP	0.0409095702990986	ADG2//ATAB2//EDA3
GO:0090304	nucleic acid metabolic process	BP	0.0485713160796659	LIP1//APRR1//AT5G52950//ATAUX2-11//AtMYB115//ADG2//AT5G09780//AT3G48440//AT3G44240//AT4G39680//DOF4.7//MRL7//ATRBP45C//ATNAP1;1//smB//CYCD6;1//NGA4//AT1G18090//ATAB2//ATNS2//ARF23//ATWRKY57//HEI10//ATCPSF30//AT1G08310//anac021//AT1G22660//ATCYCD1;1//DRB2//AT2G15900//POL2B//AXL//AT2G01440//AT2G24060//AT2G02550//EDA3//AtMYB88//AtRLP23
GO:0006470	protein dephosphorylation	BP	0.0593606023810115	AT5G19940//ATAB2//EDA3//AtRLP23
GO:0006413	translational initiation	BP	0.0597795807512216	ATELF5A-1//AT2G24060
GO:0000079	regulation of cyclin-dependent protein s...	BP	0.0641010566971395	CYCD6;1//ATCYCD1;1
GO:0009793	embryo development ending in seed dorman...	BP	0.0650676018107537	OLE2//chr13//anac021//AT2G03740//MEE14//ATEPR1//AXL//AT2G24060
GO:0045229	external encapsulating structure organiz...	BP	0.0660489797030899	AT3G54580//ATHRGP1//EXT12//AT4G08410//chr13//AT1G11590//AT2G03740//AT1G23720//ATPMEPCRD//ATEPR1
GO:0009756	carbohydrate mediated signaling	BP	0.0678654826029721	OLE2//ATEPR1//AXL
GO:0010182	sugar mediated signaling pathway	BP	0.0678654826029721	OLE2//ATEPR1//AXL
GO:0009414	response to water deprivation	BP	0.068122354759491	PLDALPHA3//AT3G44380//AT3G22160//AT3G20300//ATWRKY57
GO:0034660	ncRNA metabolic process	BP	0.068122354759491	ADG2//ATAB2//ATNS2//AT1G22660//EDA3
GO:0032269	negative regulation of cellular protein ...	BP	0.0685244009131024	CYCD6;1//ATCYCD1;1
GO:0051248	negative regulation of protein metabolic...	BP	0.0685244009131024	CYCD6;1//ATCYCD1;1
GO:0009933	meristem structural organization	BP	0.0715357808050346	OLE2//LBD4//anac021//ATEPR1//AXL
GO:0006766	vitamin metabolic process	BP	0.0730453093493308	ATBIOF//ATGLDH
GO:0009415	response to water	BP	0.0750419935045143	PLDALPHA3//AT3G44380//AT3G22160//AT3G20300//ATWRKY57
GO:0048532	anatomical structure arrangement	BP	0.0750419935045143	OLE2//LBD4//anac021//ATEPR1//AXL
GO:0009072	aromatic amino acid family metabolic pro...	BP	0.0763248786669151	CYP79A4P//ATAB2//AT2G24060
GO:0048316	seed development	BP	0.0770066883841495	OLE2//chr13//anac021//AT2G03740//MEE14//ATEPR1//AXL//IKU1//AT2G24060
GO:0006417	regulation of translation	BP	0.0776595877886072	ATAUX2-11//ATELF5A-1
GO:0009073	aromatic amino acid family biosynthetic ...	BP	0.0776595877886072	ATAB2//AT2G24060
GO:0071555	cell wall organization	BP	0.0781542725167487	AT3G54580//ATHRGP1//EXT12//AT4G08410//chr13//AT1G11590//AT1G23720//ATPMEPCRD//ATEPR1
GO:0071322	cellular response to carbohydrate stimul...	BP	0.0792435465457465	OLE2//ATEPR1//AXL
GO:0034641	cellular nitrogen compound metabolic pro...	BP	0.0812162771605605	PLDALPHA3//LIP1//APRR1//AT5G52950//ATAUX2-11//AtMYB115//CYP79A4P//ADG2//AT5G09780//ATBIOF//HINT1//AT3G48440//AT3G44240//AT4G39680//DOF4.7//MRL7//ATRBP45C//ATNAP1;1//smB//CYCD6;1//NGA4//AT1G18090//ATAB2//ATNS2//ARF23//ATWRKY57//HEI10//ATCPSF30//AT1G08310//anac021//AT1G22660//ATCYCD1;1//DRB2//AT2G15900//POL2B//AXL//AT2G01440//AT2G24060//AT2G02550//EDA3//AtMYB88//AtRLP23
GO:0071900	regulation of protein serine/threonine k...	BP	0.0823631494749153	CYCD6;1//ATCYCD1;1
GO:0009791	post-embryonic development	BP	0.0841264798102868	RXF26//LIP1//APRR1//OLE2//iqd21//DOF4.7//CYCD6;1//NGA4//chr13//PAP85//ATAB2//ABCB14//anac021//LACS2//AT2G03740//ATCYCD1;1//GLYI8//MEE14//ATEPR1//AXL//IKU1//AT2G24060//AtMYB88
GO:0010154	fruit development	BP	0.0902073122765718	OLE2//chr13//anac021//AT2G03740//MEE14//ATEPR1//AXL//IKU1//AT2G24060
GO:0019684	photosynthesis, light reaction	BP	0.0917178656554958	AT5G19940//ADG2//ATAB2//EDA3
GO:0043549	regulation of kinase activity	BP	0.0920222989700083	CYCD6;1//ATCYCD1;1
GO:0045859	regulation of protein kinase activity	BP	0.0920222989700083	CYCD6;1//ATCYCD1;1
GO:0009409	response to cold	BP	0.0925468467521045	OLE2//AT3G20300//PAP85//ABCB14//GLYI8//ATEPR1//AXL
GO:0006259	DNA metabolic process	BP	0.0953570157495128	AT5G52950//AT4G39680//ATNAP1;1//CYCD6;1//AT1G18090//HEI10//ATCYCD1;1//POL2B//AT2G01440//AT2G02550
GO:0006139	nucleobase-containing compound metabolic...	BP	0.096469906851335	LIP1//APRR1//AT5G52950//ATAUX2-11//AtMYB115//ADG2//AT5G09780//HINT1//AT3G48440//AT3G44240//AT4G39680//DOF4.7//MRL7//ATRBP45C//ATNAP1;1//smB//CYCD6;1//NGA4//AT1G18090//ATAB2//ATNS2//ARF23//ATWRKY57//HEI10//ATCPSF30//AT1G08310//anac021//AT1G22660//ATCYCD1;1//DRB2//AT2G15900//POL2B//AXL//AT2G01440//AT2G24060//AT2G02550//EDA3//AtMYB88//AtRLP23
GO:0016311	dephosphorylation	BP	0.0965618489522079	AT5G19940//ATAB2//EDA3//AtRLP23
GO:0006814	sodium ion transport	BP	0.09697022988223	ATCHX25//ATCHX3
GO:0010440	stomatal lineage progression	BP	0.09697022988223	CYCD6;1//ATCYCD1;1
GO:0009658	chloroplast organization	BP	0.0990283388575427	ADG2//MRL7//ATAB2//EDA3
GO:0006397	mRNA processing	BP	0.100981238377193	ATRBP45C//smB//ATCPSF30
GO:0009790	embryo development	BP	0.104173232664278	OLE2//chr13//anac021//AT2G03740//MEE14//ATEPR1//AXL//AT2G24060
GO:0009888	tissue development	BP	0.105995610226948	OLE2//AT3G49960//iqd21//AT4G39680//CYCD6;1//LBD4//chr13//anac021//ATELF5A-1//ATCYCD1;1//ATEPR1//AXL//IKU1//AtMYB88
GO:0009059	macromolecule biosynthetic process	BP	0.106067010167245	LIP1//AT5G62900//APRR1//AT5G52950//ATAUX2-11//AtMYB115//ADG2//AT5G22450//AT5G09780//AT3G48440//AT4G39680//DOF4.7//MRL7//AT4G28180//CYCD6;1//NGA4//AT1G36240//ATAB2//AT3G08870//ATNS2//ARF23//AT1G72220//ATWRKY57//AT1G08310//anac021//RPS9//LACS2//ATELF5A-1//ATCYCD1;1//AT1G24430//DRB2//AT2G15900//POL2B//AXL//AT2G24060//EDA3//AtMYB88//AtRLP23
GO:0001932	regulation of protein phosphorylation	BP	0.107084403393755	CYCD6;1//ATCYCD1;1
GO:0010374	stomatal complex development	BP	0.109184166899068	iqd21//CYCD6;1//ATCYCD1;1//AtMYB88
GO:0046483	heterocycle metabolic process	BP	0.109688814390291	LIP1//APRR1//AT5G52950//ATAUX2-11//AtMYB115//CYP79A4P//ADG2//AT5G09780//ATBIOF//HINT1//AT3G48440//AT3G44240//AT4G39680//DOF4.7//MRL7//ATRBP45C//ATNAP1;1//smB//CYCD6;1//NGA4//AT1G18090//ATAB2//ATNS2//ARF23//ATWRKY57//HEI10//ATCPSF30//AT1G08310//anac021//AT1G22660//ATCYCD1;1//DRB2//AT2G15900//POL2B//AXL//AT2G01440//AT2G24060//AT2G02550//EDA3//AtMYB88//AtRLP23
GO:0009664	plant-type cell wall organization	BP	0.111816341533169	AT3G54580//ATHRGP1//EXT12//AT4G08410//AT1G23720//ATEPR1
GO:0042793	transcription from plastid promoter	BP	0.112243573364477	ATAB2//EDA3
GO:0051338	regulation of transferase activity	BP	0.112243573364477	CYCD6;1//ATCYCD1;1
GO:0016567	protein ubiquitination	BP	0.114431724402321	OLE2//AT4G39680//ATEPR1//AXL
GO:0060255	regulation of macromolecule metabolic pr...	BP	0.115075284629099	AT5G19940//LIP1//APRR1//AT5G52950//ATAUX2-11//AtMYB115//AT5G09780//AT3G48440//AT4G39680//DOF4.7//MRL7//CYCD6;1//NGA4//ATAB2//ARF23//ATWRKY57//ATCPSF30//AT1G08310//anac021//ATELF5A-1//ATCYCD1;1//DRB2//AXL//AT2G24060//EDA3//AtMYB88//AtRLP23
GO:0042325	regulation of phosphorylation	BP	0.117466238645795	CYCD6;1//ATCYCD1;1
GO:0010162	seed dormancy process	BP	0.117805326978422	OLE2//ATEPR1//AXL
GO:0022611	dormancy process	BP	0.117805326978422	OLE2//ATEPR1//AXL
GO:0009987	cellular process	BP	0.119233564003746	AT1G44120//AT5G19940//SFP1//PLDALPHA3//LIP1//AT5G62900//APRR1//ATCHX25//AT5G52950//IMPA-8//AT5G49140//GFA2//ATAUX2-11//AtMYB115//OLE2//CYP79A4P//ATCHX3//ADG2//AT5G22450//AT5G09780//ATBIOF//HINT1//AT3G54580//ATHRGP1//AT3G49960//AT3G48440//ATGLDH//AT3G46150//AT3G44240//FKBP16-2//CYP96A11//AT4G39680//DOF4.7//ATDGK7//MRL7//AT4G28180//ATRBP45C//ATNAP1;1//smB//ATIRT2//CLE2//EXT12//AT4G08410//CYCD6;1//NGA4//CRK41//ABCG39//AT1G18090//AT1G36240//AT3G22160//chr13//AT3G27325//AT3G21570//ATAB2//SIEL//AT3G08870//ATNS2//ARF23//ABCB14//AT1G72220//ATWRKY57//HEI10//ATCPSF30//AT1G08310//AT1G11590//anac021//RPS9//LACS2//ATELF5A-1//ILA//AtBOR1//AT2G03740//AT1G22660//BGLU45//ATCYCD1;1//AT1G24430//AT1G23720//ATPMEPCRD//DRB2//GLYI8//AT2G15900//ATEPR1//AtRLP20//AT2G42290//AT2G27630//POL2B//AXL//AT2G01440//IKU1//AT2G24060//ATGA2OX3//AT2G02550//EDA3//AtMYB88//AtRLP23
GO:0034645	cellular macromolecule biosynthetic proc...	BP	0.119759832955219	LIP1//AT5G62900//APRR1//AT5G52950//ATAUX2-11//AtMYB115//ADG2//AT5G22450//AT5G09780//AT3G48440//AT4G39680//DOF4.7//MRL7//AT4G28180//CYCD6;1//NGA4//AT1G36240//ATAB2//AT3G08870//ATNS2//ARF23//AT1G72220//ATWRKY57//AT1G08310//anac021//RPS9//ATELF5A-1//ATCYCD1;1//AT1G24430//DRB2//AT2G15900//POL2B//AXL//AT2G24060//EDA3//AtMYB88//AtRLP23
GO:0006807	nitrogen compound metabolic process	BP	0.120015791323931	AT5G19940//PLDALPHA3//LIP1//APRR1//AT5G52950//ATAUX2-11//AtMYB115//CYP79A4P//ADG2//AT5G09780//ATBIOF//HINT1//AT3G48440//AT3G44240//AT4G39680//DOF4.7//MRL7//ATRBP45C//ATNAP1;1//smB//CYCD6;1//NGA4//AT1G18090//ATAB2//ATNS2//ARF23//ATWRKY57//HEI10//ATCPSF30//AT1G08310//anac021//AT1G22660//ATCYCD1;1//DRB2//AT2G15900//POL2B//AXL//AT2G01440//AT2G24060//AT2G02550//EDA3//AtMYB88//AtRLP23
GO:0006950	response to stress	BP	0.12496800110857	PLDALPHA3//AT5G49140//OLE2//AT3G49960//AT3G44380//AT4G39680//ATDGK7//ATNAP1;1//ATIRT2//ABCG39//AT1G18090//AT3G22160//AT3G20300//chr13//PAP85//ABCB14//ATWRKY57//ATCPSF30//AT1G08310//LACS2//ILA//AtBOR1//AT2G21110//DRB2//GLYI8//MEE14//ATEPR1//AXL//AT2G01440//AT2G02550//AtRLP23
GO:0016226	iron-sulfur cluster assembly	BP	0.128088915329237	ATAB2//AT2G24060
GO:0031163	metallo-sulfur cluster assembly	BP	0.128088915329237	ATAB2//AT2G24060
GO:0032446	protein modification by small protein co...	BP	0.130821816028704	OLE2//AT4G39680//ATEPR1//AXL
GO:0006974	cellular response to DNA damage stimulus	BP	0.131065928594037	AT4G39680//ATNAP1;1//AT1G18090//AT2G01440//AT2G02550
GO:0009685	gibberellin metabolic process	BP	0.13348257520717	CYP96A11//ATGA2OX3
GO:0080090	regulation of primary metabolic process	BP	0.143100997713132	AT5G19940//LIP1//APRR1//ATAUX2-11//AtMYB115//AT5G09780//AT3G48440//AT4G39680//DOF4.7//MRL7//CYCD6;1//NGA4//ATAB2//ARF23//ATWRKY57//ATCPSF30//AT1G08310//anac021//ATELF5A-1//ATCYCD1;1//DRB2//AXL//AT2G24060//EDA3//AtMYB88//AtRLP23
GO:0016101	diterpenoid metabolic process	BP	0.144419294271985	CYP96A11//ATGA2OX3