GOID TERM ONTOLOGY pValue Genes GO:0043085 positive regulation of catalytic activit... BP 0.00109661577137449 AT5G27560//PGI//AT1G77090//AT2G44920 GO:0044093 positive regulation of molecular functio... BP 0.00119408910624674 AT5G27560//PGI//AT1G77090//AT2G44920 GO:0009755 hormone-mediated signaling pathway BP 0.00180837043210473 ABA3//LFY//LECRKA4.3//EDL3//MED25//AtRLP11//MIF1//ATPIN3//ABCB6 GO:0010817 regulation of hormone levels BP 0.00190099408384547 CES//EDA40//MIF1//ATPIN3//AT1G49500//ABCB6 GO:0048731 system development BP 0.00200528135647795 LBD18//CES//BBM//LFY//BHLH136//EDL3//CYP78A9//AAE3//FEY//AtG3Pp2//PGI//MRH1//MED25//MANIA//AtRLP7//MIF1//AT1G70500//ATPIN3//AT1G13230//AHK1//MEE29//OVA4//ABCB6 GO:0065009 regulation of molecular function BP 0.00206054578123702 AT5G27560//APRR3//PGI//MIF1//AT1G77090//AT2G44920 GO:0048582 positive regulation of post-embryonic de... BP 0.00214374066562827 AAE3//PGI//MED25 GO:0009734 auxin-activated signaling pathway BP 0.00240518130996663 ABA3//ATPIN3//ABCB6 GO:0032870 cellular response to hormone stimulus BP 0.00244016104971764 ABA3//LFY//LECRKA4.3//EDL3//MED25//AtRLP11//MIF1//ATPIN3//ABCB6 GO:1901700 response to oxygen-containing compound BP 0.00250096427637552 AT5G19970//ABA3//LFY//BHLH136//AT5G18750//LECRKA4.3//EDL3//AAE3//MED25//AtRLP11//MIF1//AT1G17520//MT1C//AT1G68670//AFR//AHK1//AT2G35290 GO:0071495 cellular response to endogenous stimulus BP 0.00256074657391112 ABA3//LFY//LECRKA4.3//EDL3//MED25//AtRLP11//MIF1//ATPIN3//ABCB6 GO:0071365 cellular response to auxin stimulus BP 0.00330477550235566 ABA3//ATPIN3//ABCB6 GO:0033993 response to lipid BP 0.00346497196523916 ABA3//LFY//BHLH136//LECRKA4.3//EDL3//AtRLP11//MIF1//AT1G68670//AT2G35290 GO:0097305 response to alcohol BP 0.00348858969752464 ABA3//BHLH136//LECRKA4.3//EDL3//AtRLP11//MIF1//AT1G68670//AT2G35290 GO:0051240 positive regulation of multicellular org... BP 0.00364447829423522 AAE3//PGI//MED25 GO:0001101 response to acid chemical BP 0.00397820392191398 AT5G19970//ABA3//LFY//LECRKA4.3//EDL3//AAE3//MED25//AtRLP11//MIF1//AT1G17520//MT1C//AT1G68670//AHK1 GO:0051094 positive regulation of developmental pro... BP 0.00400475929032935 AAE3//PGI//MED25 GO:0009582 detection of abiotic stimulus BP 0.00459423190525771 MED25//AFR GO:0010928 regulation of auxin mediated signaling p... BP 0.00459423190525771 ATPIN3//ABCB6 GO:0007165 signal transduction BP 0.00482023287833074 ABA3//LFY//APRR3//LECRKA4.3//EDL3//MRH1//MED25//AtRLP7//AtRLP11//MIF1//ATPIN3//AT1G13230//AT2G17050//AFR//ABCB6 GO:0007154 cell communication BP 0.0059170685921594 AT5G19970//ABA3//LFY//APRR3//LECRKA4.3//EDL3//MRH1//MED25//AtRLP7//AtRLP11//MIF1//AT1G11410//ATPIN3//AT1G13230//AT2G17050//AFR//ABCB6 GO:0009741 response to brassinosteroid BP 0.00612708745541687 BHLH136//MIF1//AT2G35290 GO:0009725 response to hormone BP 0.00633004644028772 ABA3//LFY//BHLH136//LECRKA4.3//EDL3//MED25//AtRLP11//MIF1//AT1G17520//ATPIN3//AT1G68670//AT2G35290//ABCB6 GO:0009738 abscisic acid-activated signaling pathwa... BP 0.00634014592915413 ABA3//LECRKA4.3//EDL3//AtRLP11 GO:0048513 organ development BP 0.00643347825667528 LBD18//CES//BBM//LFY//BHLH136//FEY//AtG3Pp2//MRH1//MANIA//AtRLP7//MIF1//AT1G70500//ATPIN3//AT1G13230//OVA4//ABCB6 GO:0023052 signaling BP 0.00747700887766381 ABA3//LFY//APRR3//LECRKA4.3//EDL3//MRH1//MED25//AtRLP7//AtRLP11//MIF1//ATPIN3//AT1G13230//AT2G17050//AFR//ABCB6 GO:0044700 single organism signaling BP 0.00747700887766381 ABA3//LFY//APRR3//LECRKA4.3//EDL3//MRH1//MED25//AtRLP7//AtRLP11//MIF1//ATPIN3//AT1G13230//AT2G17050//AFR//ABCB6 GO:0016131 brassinosteroid metabolic process BP 0.00780293027141044 CES//MIF1 GO:0016132 brassinosteroid biosynthetic process BP 0.00780293027141044 CES//MIF1 GO:0071215 cellular response to abscisic acid stimu... BP 0.00842319566138643 ABA3//LECRKA4.3//EDL3//AtRLP11 GO:0065007 biological regulation BP 0.00851432537059363 LBD18//CES//AT4G37230//ABA3//BBM//AT5G27560//AT5G27290//LFY//APRR3//BHLH136//LECRKA4.3//EDL3//AAE3//EDA40//AT4G31630//AtG3Pp2//PGI//MRH1//MED25//AT1G35890//AT3G25790//ATMYB67//AtRLP7//AtRLP11//MIF1//AT1G70500//ATPIN3//AT1G68670//AT1G49500//AT1G13230//AT2G17050//AFR//AT1G77090//AT2G44920//ABCB6 GO:0016128 phytosteroid metabolic process BP 0.0090419775420825 CES//MIF1 GO:0016129 phytosteroid biosynthetic process BP 0.0090419775420825 CES//MIF1 GO:0071396 cellular response to lipid BP 0.00913106942491775 ABA3//LFY//LECRKA4.3//EDL3//AtRLP11 GO:0042221 response to chemical BP 0.0100735015637008 AT5G19970//ABA3//LFY//BHLH136//AT5G18750//LECRKA4.3//EDL3//AAE3//MED25//AtRLP7//AtRLP11//MIF1//AT1G17520//MT1C//ATPIN3//AT1G68670//AT1G13230//AFR//AHK1//AT2G35290//ABCB6 GO:0009911 positive regulation of flower developmen... BP 0.0103626917586594 PGI//MED25 GO:0097306 cellular response to alcohol BP 0.0104673328949604 ABA3//LECRKA4.3//EDL3//AtRLP11 GO:0065008 regulation of biological quality BP 0.0109701846656463 LBD18//CES//AT5G27290//EDA40//AtG3Pp2//MRH1//MIF1//ATPIN3//AT1G49500//ABCB6 GO:0007275 multicellular organismal development BP 0.0112052760123706 LBD18//CES//BBM//LFY//BHLH136//LECRKA4.3//EDL3//CYP78A9//AAE3//EDA40//FEY//AtG3Pp2//PGI//MRH1//MED25//MANIA//AtRLP7//MIF1//AT1G70500//ATPIN3//AT1G13230//AHK1//MEE29//OVA4//ABCB6 GO:0009581 detection of external stimulus BP 0.0117632715273883 MED25//AFR GO:0044707 single-multicellular organism process BP 0.0126412194899068 LBD18//CES//BBM//LFY//BHLH136//LECRKA4.3//EDL3//CYP78A9//AAE3//EDA40//FEY//AtG3Pp2//PGI//MRH1//MED25//MANIA//AtRLP7//MIF1//AT1G70500//ATPIN3//AT1G13230//AHK1//MEE29//OVA4//ABCB6 GO:0009719 response to endogenous stimulus BP 0.0126679862053175 ABA3//LFY//BHLH136//LECRKA4.3//EDL3//MED25//AtRLP11//MIF1//AT1G17520//ATPIN3//AT1G68670//AT2G35290//ABCB6 GO:0010017 red or far-red light signaling pathway BP 0.0147969616934346 MED25//AFR GO:0071489 cellular response to red or far red ligh... BP 0.0147969616934346 MED25//AFR GO:2000243 positive regulation of reproductive proc... BP 0.0147969616934346 PGI//MED25 GO:0042445 hormone metabolic process BP 0.0154611316222675 CES//EDA40//MIF1//AT1G49500 GO:0048518 positive regulation of biological proces... BP 0.0167259228544921 LBD18//CES//AT5G27560//AAE3//PGI//MRH1//MED25//AT1G70500//AT1G77090//AT2G44920 GO:0009733 response to auxin BP 0.0201066703791997 ABA3//MIF1//AT1G17520//ATPIN3//ABCB6 GO:0046165 alcohol biosynthetic process BP 0.0203824786401258 CES//ABA3//MIF1//AFR GO:0009737 response to abscisic acid BP 0.0209234887672354 ABA3//LECRKA4.3//EDL3//AtRLP11//MIF1//AT1G68670 GO:0009888 tissue development BP 0.0215937721289334 LBD18//LFY//BHLH136//FEY//AtG3Pp2//MRH1//AtRLP7//MIF1//AT1G70500//ATPIN3//AT1G13230 GO:0010029 regulation of seed germination BP 0.0217465276214972 EDL3//AAE3 GO:0009620 response to fungus BP 0.0222477347156865 ABA3//AAE3//MED25//AtRLP11//AT1G13230 GO:0050832 defense response to fungus BP 0.0224500534801086 ABA3//AAE3//MED25//AtRLP11 GO:1900140 regulation of seedling development BP 0.0236580309951346 EDL3//AAE3 GO:0046700 heterocycle catabolic process BP 0.0238972113736995 ABA3//AIRP2//AT1G17520//AT1G49500 GO:0032501 multicellular organismal process BP 0.0243542959644946 LBD18//CES//BBM//LFY//BHLH136//LECRKA4.3//EDL3//CYP78A9//AAE3//EDA40//FEY//AtG3Pp2//PGI//MRH1//MED25//MANIA//AtRLP7//MIF1//AT1G70500//AT1G11410//ATPIN3//AT1G13230//AHK1//MEE29//OVA4//ABCB6 GO:0032535 regulation of cellular component size BP 0.0245565725221799 LBD18//MRH1//ATPIN3 GO:0090066 regulation of anatomical structure size BP 0.0245565725221799 LBD18//MRH1//ATPIN3 GO:0044270 cellular nitrogen compound catabolic pro... BP 0.0246415979765614 ABA3//AIRP2//AT1G17520//AT1G49500 GO:0010054 trichoblast differentiation BP 0.0261722505072756 LBD18//AtG3Pp2//MRH1//ATPIN3 GO:0009791 post-embryonic development BP 0.0263172898201436 LBD18//CES//LFY//BHLH136//LECRKA4.3//EDL3//AAE3//PGI//MRH1//MED25//AtRLP7//MIF1//AT1G13230//AHK1//MEE29//OVA4//ABCB6 GO:0000271 polysaccharide biosynthetic process BP 0.026701382021741 AT5G27560//PGI//AT1G70500//ATPIN3//AT1G54790//AT1G77090 GO:0015979 photosynthesis BP 0.0269635824300093 RPOA//AT4G37230//AT5G27560//AT1G77090//AT2G44920 GO:0010033 response to organic substance BP 0.027276002015213 ABA3//LFY//BHLH136//LECRKA4.3//EDL3//MED25//AtRLP7//AtRLP11//MIF1//AT1G17520//ATPIN3//AT1G68670//AT1G13230//AFR//AT2G35290//ABCB6 GO:0009639 response to red or far red light BP 0.0275946149013586 BHLH136//MED25//MIF1//ATPIN3//AFR GO:0010638 positive regulation of organelle organiz... BP 0.027871033826076 LBD18//MRH1//AT1G70500 GO:0051130 positive regulation of cellular componen... BP 0.027871033826076 LBD18//MRH1//AT1G70500 GO:0009311 oligosaccharide metabolic process BP 0.0285736361873139 AT5G27560//PGI//MANIA//AT1G77090 GO:0010053 root epidermal cell differentiation BP 0.029402376228715 LBD18//AtG3Pp2//MRH1//ATPIN3 GO:0071478 cellular response to radiation BP 0.029784899395217 MED25//AFR GO:0071482 cellular response to light stimulus BP 0.029784899395217 MED25//AFR GO:0010167 response to nitrate BP 0.0302066466835555 AT5G19970//AAE3//MT1C GO:0050789 regulation of biological process BP 0.0310148675489456 LBD18//CES//AT4G37230//ABA3//BBM//AT5G27560//LFY//APRR3//BHLH136//LECRKA4.3//EDL3//AAE3//AT4G31630//PGI//MRH1//MED25//AT1G35890//AT3G25790//ATMYB67//AtRLP7//AtRLP11//MIF1//AT1G70500//ATPIN3//AT1G68670//AT1G13230//AT2G17050//AFR//AT1G77090//AT2G44920//ABCB6 GO:0006487 protein N-linked glycosylation BP 0.0319528480294562 MANIA//ABCB6 GO:0050790 regulation of catalytic activity BP 0.0319739386188106 AT5G27560//PGI//AT1G77090//AT2G44920 GO:0010035 response to inorganic substance BP 0.0324952206954438 AT5G19970//ABA3//AT5G18750//EDL3//AAE3//AT1G17520//MT1C//AHK1 GO:0090627 plant epidermal cell differentiation BP 0.0346741349898068 LBD18//AtG3Pp2//MRH1//ATPIN3 GO:0006694 steroid biosynthetic process BP 0.0364682605595983 CES//MIF1 GO:0009914 hormone transport BP 0.0364682605595983 ATPIN3//ABCB6 GO:0009926 auxin polar transport BP 0.0364682605595983 ATPIN3//ABCB6 GO:0043069 negative regulation of programmed cell d... BP 0.0364682605595983 ABA3//AtRLP11 GO:0060918 auxin transport BP 0.0364682605595983 ATPIN3//ABCB6 GO:0019439 aromatic compound catabolic process BP 0.0365460438883887 ABA3//AIRP2//AT1G17520//AT1G49500 GO:0071229 cellular response to acid chemical BP 0.0372197327143306 ABA3//LFY//LECRKA4.3//EDL3//MED25//AtRLP11 GO:0071310 cellular response to organic substance BP 0.0381130520266185 ABA3//LFY//LECRKA4.3//EDL3//MED25//AtRLP11//MIF1//ATPIN3//ABCB6 GO:1901361 organic cyclic compound catabolic proces... BP 0.038475534712699 ABA3//AIRP2//AT1G17520//AT1G49500 GO:0060548 negative regulation of cell death BP 0.0388128164356957 ABA3//AtRLP11 GO:0000023 maltose metabolic process BP 0.0391678586658713 AT5G27560//PGI//AT1G77090 GO:0015706 nitrate transport BP 0.0391678586658713 AT5G19970//AAE3//MT1C GO:0048608 reproductive structure development BP 0.0397681456856584 CES//LFY//EDL3//CYP78A9//AAE3//PGI//MRH1//MED25//AtRLP7//AT1G13230//AHK1//MEE29//OVA4//ABCB6 GO:0061458 reproductive system development BP 0.0397681456856584 CES//LFY//EDL3//CYP78A9//AAE3//PGI//MRH1//MED25//AtRLP7//AT1G13230//AHK1//MEE29//OVA4//ABCB6 GO:0009411 response to UV BP 0.0433779710005187 ATPIN3//AFR//ABCB6 GO:2000026 regulation of multicellular organismal d... BP 0.0466903065374696 BHLH136//EDL3//AAE3//PGI//MED25//MIF1//ATPIN3 GO:0042446 hormone biosynthetic process BP 0.0478056789133651 CES//MIF1//AT1G49500 GO:0048856 anatomical structure development BP 0.0487726720805993 LBD18//CES//BBM//LFY//BHLH136//EDL3//CYP78A9//AAE3//EDA40//FEY//AtG3Pp2//PGI//MRH1//MED25//MANIA//AtRLP7//MIF1//AT1G70500//ATPIN3//AT1G13230//AHK1//MEE29//OVA4//ABCB6 GO:0044767 single-organism developmental process BP 0.0520734044700083 LBD18//CES//BBM//LFY//BHLH136//LECRKA4.3//EDL3//CYP78A9//AAE3//EDA40//FEY//AtG3Pp2//PGI//MRH1//MED25//MANIA//AtRLP7//MIF1//AT1G70500//ATPIN3//AT1G13230//AHK1//MEE29//OVA4//ABCB6 GO:0050793 regulation of developmental process BP 0.0528981721659802 LFY//BHLH136//EDL3//AAE3//PGI//MED25//MIF1//ATPIN3 GO:0010015 root morphogenesis BP 0.0535969345576387 LBD18//AtG3Pp2//MRH1//ATPIN3 GO:0048364 root development BP 0.0538564780093568 LBD18//AtG3Pp2//MRH1//MANIA//ATPIN3