GOID	TERM	ONTOLOGY	pValue	Genes
GO:0010101	post-embryonic root morphogenesis	BP	0.000385273298625457	NodGS//AMT1;1//AIR12//AIR3
GO:0010102	lateral root morphogenesis	BP	0.000385273298625457	NodGS//AMT1;1//AIR12//AIR3
GO:0048527	lateral root development	BP	0.00101676945760354	NodGS//AMT1;1//AIR12//AIR3//ATGSTU17
GO:0048528	post-embryonic root development	BP	0.00160315234116074	NodGS//AMT1;1//AIR12//AIR3//ATGSTU17
GO:0010030	positive regulation of seed germination	BP	0.00445897130067667	AT5G63080//AT5G06550
GO:0009886	post-embryonic morphogenesis	BP	0.00901088613313649	ATGER3//NodGS//AMT1;1//SOL1//AIR12//AT1G14180//AIR3
GO:0010015	root morphogenesis	BP	0.014899617505445	AT2G47540//NodGS//sks4//AMT1;1//AIR12//AIR3//ATXIB//AT2G21045
GO:0016571	histone methylation	BP	0.0151403884793053	AT5G63080//AT5G06550//AT3G42860//AT2G41050//ATPCNA1//CYCB2;4
GO:0034220	ion transmembrane transport	BP	0.0171652158927119	AT4G22840//AtAVP1//AT1G77610//ATZIP4//AT2G21045
GO:0006479	protein methylation	BP	0.0173333729485192	AT5G63080//AT5G06550//AT3G42860//AT2G41050//ATPCNA1//CYCB2;4
GO:0008213	protein alkylation	BP	0.0173333729485192	AT5G63080//AT5G06550//AT3G42860//AT2G41050//ATPCNA1//CYCB2;4
GO:0006812	cation transport	BP	0.0237344932717897	ATGER3//AT4G22840//AMT1;1//AtNIP5;1//AtAVP1//ATZIP4//AT2G04305//ATGSTU17//AT2G21045//AtGulLO2//BGLU26
GO:0016569	covalent chromatin modification	BP	0.0242817401348125	AT5G63080//AT5G06550//AT3G42860//AT4G26870//AT2G41050//ATPCNA1//CYCB2;4
GO:0010311	lateral root formation	BP	0.0249106117496105	NodGS//AMT1;1
GO:0022622	root system development	BP	0.025003146325882	AT2G47540//NodGS//sks4//AMT1;1//AIR12//AIR3//ATXIB//ATGSTU17//AT2G21045
GO:0048364	root development	BP	0.025003146325882	AT2G47540//NodGS//sks4//AMT1;1//AIR12//AIR3//ATXIB//ATGSTU17//AT2G21045
GO:0006811	ion transport	BP	0.0264818495398924	ATGER3//AT4G22840//AMT1;1//AtNIP5;1//ATPLT5//AtAVP1//AT1G77610//ATZIP4//AT1G11540//AT2G04305//ATGSTU17//AT2G21045//AtGulLO2//BGLU26
GO:0030198	extracellular matrix organization	BP	0.0268978741973476	AT1G33430//AIR12
GO:0043062	extracellular structure organization	BP	0.0268978741973476	AT1G33430//AIR12
GO:0006325	chromatin organization	BP	0.0304324602798268	AT5G63080//AT5G06550//AT3G42860//AT4G26870//AT2G41050//AT3G09700//ATPCNA1//CYCB2;4
GO:0016568	chromatin modification	BP	0.0316228070875243	AT5G63080//AT5G06550//AT3G42860//AT4G26870//AT2G41050//ATPCNA1//CYCB2;4
GO:0071705	nitrogen compound transport	BP	0.0321844981882302	AMT1;1//AtNIP5;1//AT4G02400//ATPLT5//AT1G77610//AT1G02620//AT1G11540//ATGSTU17//AT2G21045//BGLU26
GO:0010167	response to nitrate	BP	0.0340325656530876	AtNIP5;1//AT1G11540//AT2G21045//BGLU26
GO:0055085	transmembrane transport	BP	0.0345181734418237	PDE135//AT4G22840//ATPLT5//AtAVP1//AT1G77610//ATZIP4//AT2G17500//AT2G04305//AT2G21045//ABCC2
GO:0015698	inorganic anion transport	BP	0.0363019690496155	AMT1;1//AtNIP5;1//AT1G11540//AT2G21045//BGLU26
GO:0016570	histone modification	BP	0.0370542580242893	AT5G63080//AT5G06550//AT3G42860//AT2G41050//ATPCNA1//CYCB2;4
GO:0046685	response to arsenic-containing substance	BP	0.0400707865632822	ARS5//AtNIP5;1
GO:0030001	metal ion transport	BP	0.0405586349397255	ATGER3//AT4G22840//AtNIP5;1//ATZIP4//AT2G04305//AT2G21045//AtGulLO2//BGLU26
GO:0051726	regulation of cell cycle	BP	0.0417419975196829	AT5G10950//LAF3//emb1796//ATPCNA1//CYCB2;4
GO:0048582	positive regulation of post-embryonic de...	BP	0.0424614322617536	AT5G63080//AT5G06550
GO:0015706	nitrate transport	BP	0.0426724740521555	AtNIP5;1//AT1G11540//AT2G21045//BGLU26
GO:0051240	positive regulation of multicellular org...	BP	0.0449042377435392	AT5G63080//AT5G06550
GO:0032259	methylation	BP	0.0466722607773719	AT5G63080//AT5G06550//AT3G42860//RPS6//AT2G41050//AT1G19340//ATPCNA1//CYCB2;4
GO:0006820	anion transport	BP	0.0478456299832389	AMT1;1//AtNIP5;1//ATPLT5//AT1G77610//AT1G11540//ATGSTU17//AT2G21045//BGLU26
GO:0065009	regulation of molecular function	BP	0.0503297092678579	AT4G30020//AT4G01610//CYCB2;4//AIR3//AT2G21045
GO:0009653	anatomical structure morphogenesis	BP	0.0522618368006574	AT2G47540//ATGER3//NodGS//emb1796//AT4G26870//sks4//AMT1;1//AT4G01610//AT1G33430//SOL1//AIR12//AT1G14180//AIR3//ATXIB//AT2G21045
GO:0030048	actin filament-based movement	BP	0.0525326966838438	GLP8//ATXIB
GO:0051094	positive regulation of developmental pro...	BP	0.0525326966838438	AT5G63080//AT5G06550
GO:0010817	regulation of hormone levels	BP	0.0553970796117184	ILL3//NodGS//sks4//AtAVP1//GH3.17//AT2G17500//BGLU26
GO:0080167	response to karrikin	BP	0.0601415631590156	AMT1;1//UGT84A2//ATGSTU17
GO:0009791	post-embryonic development	BP	0.0644775711670366	ATGER3//AT5G63080//AT5G06550//NodGS//emb1796//AT3G42860//AT4G26870//sks4//AMT1;1//AT4G02400//AT4G01610//SOL1//AIR12//CYCB2;4//AT1G14180//ATMST2//AIR3//ATGSTU17
GO:0048569	post-embryonic organ development	BP	0.0644939255790096	NodGS//sks4//AMT1;1//AIR12//AT1G14180//AIR3//ATGSTU17
GO:0048646	anatomical structure formation involved ...	BP	0.065903279641668	NodGS//AMT1;1//AT1G33430//AT1G14180
GO:0000041	transition metal ion transport	BP	0.0672087664792426	AtNIP5;1//ATZIP4//AT2G21045//AtGulLO2
GO:0008283	cell proliferation	BP	0.0685277089910417	SOL1//ATPCNA1//CYCB2;4//AT1G14180
GO:0001101	response to acid chemical	BP	0.0732687208225988	LTP3//MPB2C//NodGS//emb1796//AtMYB32//AMT1;1//AtNIP5;1//AtAVP1//AT1G11540//AT2G04305//ATGSTU17//ARAC1//AT2G21045//BGLU26
GO:0009850	auxin metabolic process	BP	0.0741352983931791	ILL3//NodGS//BGLU26
GO:0098656	anion transmembrane transport	BP	0.0778327099183705	AT1G77610//AT2G21045
GO:0050790	regulation of catalytic activity	BP	0.0809956978634548	AT4G30020//AT4G01610//CYCB2;4//AIR3
GO:0048645	organ formation	BP	0.0816283190318836	NodGS//AMT1;1//AT1G14180
GO:0006862	nucleotide transport	BP	0.0838878305398333	AMT1;1//AT1G77610
GO:0043933	macromolecular complex subunit organizat...	BP	0.0851721105377228	AT5G63080//ARS5//MPB2C//AT5G06550//AT3G42860//AT4G30020//AT4G26870//AMT1;1//AT2G41050//AT3G09700//ATPCNA1//CYCB2;4//ARAC1
GO:0016144	S-glycoside biosynthetic process	BP	0.0914353054007468	AT4G30020//AIR3//BGLU26
GO:0016246	RNA interference	BP	0.0914353054007468	AtTEX1//AT4G26870//CYCB2;4
GO:0019758	glycosinolate biosynthetic process	BP	0.0914353054007468	AT4G30020//AIR3//BGLU26
GO:0019761	glucosinolate biosynthetic process	BP	0.0914353054007468	AT4G30020//AIR3//BGLU26
GO:0051276	chromosome organization	BP	0.0977057845219075	AT5G63080//AT5G06550//AT3G42860//AT4G26870//AT2G41050//AT3G09700//ATPCNA1//CYCB2;4
GO:0042343	indole glucosinolate metabolic process	BP	0.0981487857826622	392_
GO:0051223	regulation of protein transport	BP	0.0981487857826622	220_
GO:0070201	regulation of establishment of protein l...	BP	0.0981487857826622	220_
GO:0071941	nitrogen cycle metabolic process	BP	0.0981487857826622	973_
GO:0043414	macromolecule methylation	BP	0.0990038886850574	AT5G63080//AT5G06550//AT3G42860//RPS6//AT2G41050//ATPCNA1//CYCB2;4
GO:0010029	regulation of seed germination	BP	0.0996151881154288	AT5G63080//AT5G06550
GO:0010374	stomatal complex development	BP	0.101708224692226	ATGER3//SOL1//CYCB2;4
GO:0002252	immune effector process	BP	0.104077832961117	MPB2C//NodGS//AT4G26870//AT2G33710
GO:0006569	tryptophan catabolic process	BP	0.106121272320093	NodGS//BGLU26
GO:0043086	negative regulation of catalytic activit...	BP	0.106121272320093	AT4G30020//AIR3
GO:0046218	indolalkylamine catabolic process	BP	0.106121272320093	NodGS//BGLU26
GO:0006749	glutathione metabolic process	BP	0.107422320119088	436_
GO:0006829	zinc II ion transport	BP	0.107422320119088	462_
GO:0032507	maintenance of protein location in cell	BP	0.107422320119088	220_
GO:0045185	maintenance of protein location	BP	0.107422320119088	220_
GO:0048829	root cap development	BP	0.107422320119088	973_
GO:1900140	regulation of seedling development	BP	0.109416639882031	AT5G63080//AT5G06550
GO:0035194	posttranscriptional gene silencing by RN...	BP	0.110244312924017	AtTEX1//AT4G26870//CYCB2;4
GO:0042436	indole-containing compound catabolic pro...	BP	0.112739013105197	NodGS//BGLU26
GO:0015931	nucleobase-containing compound transport	BP	0.114613520727159	AMT1;1//AT4G02400//AT1G77610
GO:0006505	GPI anchor metabolic process	BP	0.116601370721558	939_
GO:0006541	glutamine metabolic process	BP	0.116601370721558	973_
GO:0009682	induced systemic resistance	BP	0.116601370721558	392_
GO:0052482	defense response by cell wall thickening	BP	0.116601370721558	392_
GO:0052544	defense response by callose deposition i...	BP	0.116601370721558	392_
GO:0051049	regulation of transport	BP	0.119047831750057	AMT1;1//AT1G19970//AT2G21045
GO:0016441	posttranscriptional gene silencing	BP	0.121288848349933	AtTEX1//AT4G26870//CYCB2;4
GO:0043090	amino acid import	BP	0.122859349363552	AMT1;1//ATPLT5
GO:0019852	L-ascorbic acid metabolic process	BP	0.125686891335029	712_
GO:0019853	L-ascorbic acid biosynthetic process	BP	0.125686891335029	712_
GO:0016143	S-glycoside metabolic process	BP	0.125817493091554	AT4G30020//AIR3//BGLU26
GO:0019757	glycosinolate metabolic process	BP	0.125817493091554	AT4G30020//AIR3//BGLU26
GO:0019760	glucosinolate metabolic process	BP	0.125817493091554	AT4G30020//AIR3//BGLU26
GO:0044092	negative regulation of molecular functio...	BP	0.126281002564961	AT4G30020//AIR3
GO:0009725	response to hormone	BP	0.128688958648197	LTP3//NodGS//emb1796//AtMYB32//AT4G30020//AMT1;1//AIR12//GH3.17//AIR3//ATGSTU17//ARAC1//BGLU26//AT2G33710
GO:0090558	plant epidermis development	BP	0.128698479785932	AT2G47540//ATGER3//sks4//SOL1//CYCB2;4//ATXIB//AT2G21045
GO:0009074	aromatic amino acid family catabolic pro...	BP	0.129725364074184	NodGS//BGLU26
GO:0042127	regulation of cell proliferation	BP	0.129725364074184	SOL1//AT1G14180
GO:1901698	response to nitrogen compound	BP	0.129729375149486	AtTEX1//NodGS//AtNIP5;1//AT1G11540//ATGSTU17//AT2G21045//BGLU26//AT2G33710
GO:0015748	organophosphate ester transport	BP	0.133191618084007	AMT1;1//AT1G77610
GO:0015780	nucleotide-sugar transport	BP	0.134679826167012	713_
GO:0042274	ribosomal small subunit biogenesis	BP	0.134679826167012	487_
GO:0044273	sulfur compound catabolic process	BP	0.134679826167012	392_