GOID TERM ONTOLOGY pValue Genes GO:0019320 hexose catabolic process BP 0.000404126652437217 ATHXK1//ATB//AT3G04830//XXT5//ATVHA-C//AtFYPP1//UBP1A//AT1G27090//COS1 GO:0046365 monosaccharide catabolic process BP 0.000472624721227217 ATHXK1//ATB//AT3G04830//XXT5//ATVHA-C//AtFYPP1//UBP1A//AT1G27090//COS1 GO:0007020 microtubule nucleation BP 0.000514367936956661 SLP2//SCPL27//AT1G74800//AT1G65010//AT2G36410//AT2G26730 GO:0046785 microtubule polymerization BP 0.000660335982505421 SLP2//SCPL27//AT1G74800//AT1G65010//AT2G36410//AT2G26730 GO:0016052 carbohydrate catabolic process BP 0.000709567166995433 SLP2//AtCESA1//ATHXK1//emb2448//ATB//AT3G27240//AT3G04830//XXT5//ATVHA-C//ATXYL1//AtFYPP1//UBP1A//AT1G27090//COS1//AT2G26730 GO:0006655 phosphatidylglycerol biosynthetic proces... BP 0.000744398228318139 CYP97A3//LPAT2//AT4G28080//CH-42//ATGPAT3//CAS1 GO:0046471 phosphatidylglycerol metabolic process BP 0.000836499218496678 CYP97A3//LPAT2//AT4G28080//CH-42//ATGPAT3//CAS1 GO:0031109 microtubule polymerization or depolymeri... BP 0.000937146295213813 SLP2//SCPL27//AT1G74800//AT1G65010//AT2G36410//AT2G26730 GO:0006007 glucose catabolic process BP 0.00147912865134499 ATB//AT3G04830//XXT5//ATVHA-C//AtFYPP1//UBP1A//AT1G27090//COS1 GO:0009926 auxin polar transport BP 0.00231736278592916 AGP8//ATB//AT1G76520//AT2G17500//AT1G04680//AT2G26730 GO:0010411 xyloglucan metabolic process BP 0.00254290324931026 XXT5//ATXYL1//ATXTH17 GO:0060918 auxin transport BP 0.00301250520156502 AGP8//ATB//AT1G76520//AT2G17500//AT1G04680//AT2G26730 GO:0009914 hormone transport BP 0.00327562852833844 AGP8//ATB//AT1G76520//AT2G17500//AT1G04680//AT2G26730 GO:0005996 monosaccharide metabolic process BP 0.00384372790670719 AtGulLO3//AT3G55590//ATUXS1//AtVAB2//ATHXK1//ATB//AT3G04830//XXT5//ATVHA-C//AtFYPP1//UBP1A//AT1G27090//COS1 GO:0044724 single-organism carbohydrate catabolic p... BP 0.00480202864050352 AtCESA1//ATHXK1//emb2448//ATB//AT3G27240//AT3G04830//XXT5//ATVHA-C//AtFYPP1//UBP1A//AT1G27090//COS1 GO:0009832 plant-type cell wall biogenesis BP 0.00539495820932589 AT4G14360//AGP8//SLP2//AtCESA1//emb2448//ATXYL1//AT1G04680//AT2G26730 GO:0019318 hexose metabolic process BP 0.00696607639412086 AT3G55590//AtVAB2//ATHXK1//ATB//AT3G04830//XXT5//ATVHA-C//AtFYPP1//UBP1A//AT1G27090//COS1 GO:0006006 glucose metabolic process BP 0.00712944733692221 AT3G55590//AtVAB2//ATB//AT3G04830//XXT5//ATVHA-C//AtFYPP1//UBP1A//AT1G27090//COS1 GO:0009073 aromatic amino acid family biosynthetic ... BP 0.0072415734952773 AT5G22340//PIF5//GSA2//AT2G17033//ATCPO-I GO:0015988 energy coupled proton transmembrane tran... BP 0.00848340063822666 AtVAB2//emb2448//ATVHA-C GO:0015991 ATP hydrolysis coupled proton transport BP 0.00848340063822666 AtVAB2//emb2448//ATVHA-C GO:0016197 endosomal transport BP 0.00848340063822666 ATGB3//ATEHD1//ATSKD1 GO:0008361 regulation of cell size BP 0.00938168962034469 AGP8//ATB//AT1G04680//AT2G26730 GO:0046474 glycerophospholipid biosynthetic process BP 0.0114995526152916 CYP97A3//LPAT2//AT4G28080//CH-42//ATGPAT3//CAS1 GO:0035966 response to topologically incorrect prot... BP 0.0130490021967345 AT5G24810//ATBZIP61//AT3G48760//XLG2//ATB//AT3G13430//AT3G27240//ATVHA-C//ATERF11//ATBZIP34 GO:0044085 cellular component biogenesis BP 0.0134947559729635 AT4G14360//ALNS//AT5G22340//AT5G06120//AGP8//LTP12//GSA2//AtVAB2//SLP2//AtCESA1//CH-42//AT4G18030//emb2448//ATB//AT3G27240//SCPL27//AT3G05910//ATVHA-C//AT1G74800//ATXYL1//AT1G65010//AT2G17033//AT2G36410//AT2G03740//AT1G04680//ATCPO-I//AT2G02970//AT2G26730 GO:0006779 porphyrin-containing compound biosynthet... BP 0.0163710622655977 CYP97A3//PIF5//GSA2//CH-42//HEME1//ATCPO-I//CAS1 GO:0006986 response to unfolded protein BP 0.0163710622655977 AT5G24810//ATBZIP61//AT3G48760//XLG2//AT3G13430//ATERF11//ATBZIP34 GO:0030968 endoplasmic reticulum unfolded protein r... BP 0.0163710622655977 AT5G24810//ATBZIP61//AT3G48760//XLG2//AT3G13430//ATERF11//ATBZIP34 GO:0034620 cellular response to unfolded protein BP 0.0163710622655977 AT5G24810//ATBZIP61//AT3G48760//XLG2//AT3G13430//ATERF11//ATBZIP34 GO:0035967 cellular response to topologically incor... BP 0.0163710622655977 AT5G24810//ATBZIP61//AT3G48760//XLG2//AT3G13430//ATERF11//ATBZIP34 GO:0098655 cation transmembrane transport BP 0.0169580595119764 ATCHX25//ATCHX20//AtVAB2//emb2448//ATVHA-C//ZIP3 GO:0098662 inorganic cation transmembrane transport BP 0.0169580595119764 ATCHX25//ATCHX20//AtVAB2//emb2448//ATVHA-C//ZIP3 GO:0098660 inorganic ion transmembrane transport BP 0.0178615689327942 ATCHX25//ATCHX20//AtVAB2//emb2448//ATVHA-C//ZIP3 GO:0033014 tetrapyrrole biosynthetic process BP 0.0179111166071036 CYP97A3//PIF5//GSA2//CH-42//HEME1//ATCPO-I//CAS1 GO:0006650 glycerophospholipid metabolic process BP 0.0187182181022243 CYP97A3//LPAT2//AT4G28080//CH-42//ATGPAT3//ATPIPK10//CAS1 GO:0045017 glycerolipid biosynthetic process BP 0.0187975880452651 CYP97A3//LPAT2//AT4G28080//CH-42//ATGPAT3//CAS1 GO:0010604 positive regulation of macromolecule met... BP 0.0213911972140747 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//AME3//ATXRCC1//AT1G30455//ATCPO-I//ATBZIP34 GO:0007154 cell communication BP 0.0216731188356332 AT3//AT5G25510//AT5G24810//ALNS//AT5G54200//AT5G53500//L1L//AtPP2-A6//AtCAF1b//AtRABH1e//PIF5//ATBZIP61//ATPEN3//AT3G48760//ATGB3//XLG2//BAT1//ATHXK1//AT4G11900//ATB//ATCLH1//RALFL27//AT3G13430//BTS//CDG1//ATERF1//ARFB1C//AT1G72180//AT1G63730//ATWRKY9//AtMYB62//ORA59//AT1G07650//ATERF11//EVR//AT1G27190//ATBZIP34//ZIP3//ATRNS1//COS1//AT2G26730 GO:0007166 cell surface receptor signaling pathway BP 0.0218055972656302 XLG2//AT1G72180//AT1G07650//EVR//AT1G27190//AT2G26730 GO:0005975 carbohydrate metabolic process BP 0.0225756217795528 AT4G14360//AT5G20840//CYP97A3//AT5G24810//AtGulLO3//AT5G06120//AT3G55590//ATUXS1//AtVAB2//SLP2//AtCESA1//EMB2797//ATHXK1//AT4G18180//emb2448//ATB//AT3G27240//AT3G24330//AT3G04830//XXT5//AT1G04850//ATVHA-C//AT1G74800//ATXYL1//AtFYPP1//UBP1A//ATHEX3//AT2G35840//ATXTH17//AT1G04680//ATATP-PRT2//ATGH9A2//AT1G27090//GAUT10//AT2G14690//COS1//AT2G26730 GO:1901421 positive regulation of response to alcoh... BP 0.0226429944746412 ATB//CDG1 GO:0006778 porphyrin-containing compound metabolic ... BP 0.0231967946621028 CYP97A3//PIF5//GSA2//CH-42//ATCLH1//HEME1//ATCPO-I//CAS1 GO:0033013 tetrapyrrole metabolic process BP 0.0231967946621028 CYP97A3//PIF5//GSA2//CH-42//ATCLH1//HEME1//ATCPO-I//CAS1 GO:0031325 positive regulation of cellular metaboli... BP 0.0237779499942849 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//AME3//ATXRCC1//AT1G30455//ATCPO-I//ATBZIP34 GO:0051258 protein polymerization BP 0.0241027508165555 AtVAB2//SLP2//SCPL27//AT1G74800//AT1G65010//AT2G36410//AT2G26730 GO:0006623 protein targeting to vacuole BP 0.0245473213860239 AT5G11710//ATCHX20//ATEHD1//AT1G04850//ATSKD1 GO:0072665 protein localization to vacuole BP 0.0245473213860239 AT5G11710//ATCHX20//ATEHD1//AT1G04850//ATSKD1 GO:0072666 establishment of protein localization to... BP 0.0245473213860239 AT5G11710//ATCHX20//ATEHD1//AT1G04850//ATSKD1 GO:0044550 secondary metabolite biosynthetic proces... BP 0.024842127283346 AT5G24760//AT5G66390//PIF5//ATCAD7//SLP2//CH-42//AOP//ATVHA-C//AT2G30930 GO:0045935 positive regulation of nucleobase-contai... BP 0.0251890229401554 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//ATXRCC1//AT1G30455//ATCPO-I//ATBZIP34 GO:1901575 organic substance catabolic process BP 0.0253805410680059 AT5G20840//ELF9//AT5G22820//AtCAF1b//PIF5//AT3G57570//AT3G55590//AtVAB2//SLP2//AtCESA1//ATHXK1//emb2448//ATB//ATCLH1//AT3G27240//HEME1//AT3G04830//XXT5//ENDO2//ATVHA-C//ATXYL1//AtFYPP1//UBP1A//UBP19//ATATP-PRT2//ATCPO-I//AT1G27090//ATSKD1//FRS3//COS1//AT2G26730 GO:0015995 chlorophyll biosynthetic process BP 0.0262999529120486 CYP97A3//PIF5//GSA2//CH-42//ATCPO-I//CAS1 GO:0051173 positive regulation of nitrogen compound... BP 0.0266003920670996 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//ATXRCC1//AT1G30455//ATCPO-I//ATBZIP34 GO:0006636 unsaturated fatty acid biosynthetic proc... BP 0.0274217732114864 CYP97A3//PIF5//CH-42//CAS1 GO:0033559 unsaturated fatty acid metabolic process BP 0.0274217732114864 CYP97A3//PIF5//CH-42//CAS1 GO:0042546 cell wall biogenesis BP 0.0280005886214527 AT4G14360//AGP8//SLP2//AtCESA1//AT4G18030//emb2448//AT3G05910//ATXYL1//AT1G04680//AT2G26730 GO:0046486 glycerolipid metabolic process BP 0.0293367394703272 CYP97A3//LPAT2//AT4G28080//CH-42//ATGPAT3//ATPIPK10//CAS1 GO:1901566 organonitrogen compound biosynthetic pro... BP 0.029940627211549 ATLCB1//CYP97A3//ATLOG9//ALNS//AT5G22340//PIF5//GSA2//PHS1//SLP2//CH-42//emb2448//HEME1//AT3G06460//JAL35//AT1G76520//AT1G48230//AT2G17033//ATATP-PRT2//ATCPO-I//CAS1//COS1 GO:0010628 positive regulation of gene expression BP 0.0311776573239852 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//AME3//AT1G30455//ATCPO-I//ATBZIP34 GO:0042364 water-soluble vitamin biosynthetic proce... BP 0.0313437432705642 AtGulLO3//PHS1//COS1 GO:0015994 chlorophyll metabolic process BP 0.0316298771903927 CYP97A3//PIF5//GSA2//CH-42//ATCLH1//ATCPO-I//CAS1 GO:0007167 enzyme linked receptor protein signaling... BP 0.0336390440585056 AT1G72180//AT1G07650//EVR//AT1G27190//AT2G26730 GO:0007169 transmembrane receptor protein tyrosine ... BP 0.0336390440585056 AT1G72180//AT1G07650//EVR//AT1G27190//AT2G26730 GO:0006767 water-soluble vitamin metabolic process BP 0.0342275651490181 AtGulLO3//PHS1//COS1 GO:0009809 lignin biosynthetic process BP 0.0342275651490181 AT5G66390//ATCAD7//ATVHA-C GO:1902600 hydrogen ion transmembrane transport BP 0.0342275651490181 AtVAB2//emb2448//ATVHA-C GO:0010557 positive regulation of macromolecule bio... BP 0.0345259025268799 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//AME3//AT1G30455//ATCPO-I//ATBZIP34 GO:0007034 vacuolar transport BP 0.0353323986589459 AT5G11710//ATCHX20//ATEHD1//AT1G04850//ATSKD1 GO:0031328 positive regulation of cellular biosynth... BP 0.0362921321780634 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//AME3//AT1G30455//ATCPO-I//ATBZIP34 GO:0097306 cellular response to alcohol BP 0.0396802540147889 ALNS//L1L//AtCAF1b//AT3G48760//XLG2//ATB//CDG1//ATERF11 GO:0010817 regulation of hormone levels BP 0.042973800333399 AGP8//PIF5//BAT1//ATCKX4//ATB//HEME1//AT1G76520//AT1G48230//AT2G17500//AT1G04680//AT2G26730 GO:0031123 RNA 3'-end processing BP 0.0430084297896836 AtCAF1b//PAPS3 GO:0000226 microtubule cytoskeleton organization BP 0.0433327953068596 SLP2//SCPL27//AT1G74800//AT1G65010//AT2G36410//AT2G26730 GO:0007017 microtubule-based process BP 0.0463908667606571 SLP2//SCPL27//AT1G74800//AT1G65010//AT2G36410//CTEXP//AT2G26730 GO:0045893 positive regulation of transcription, DN... BP 0.0464338991014019 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//AT1G30455//ATCPO-I//ATBZIP34 GO:0051254 positive regulation of RNA metabolic pro... BP 0.0464338991014019 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//AT1G30455//ATCPO-I//ATBZIP34 GO:1902680 positive regulation of RNA biosynthetic ... BP 0.0464338991014019 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//AT1G30455//ATCPO-I//ATBZIP34 GO:1903508 positive regulation of nucleic acid-temp... BP 0.0464338991014019 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//AT1G30455//ATCPO-I//ATBZIP34 GO:0009110 vitamin biosynthetic process BP 0.0470773045682988 AtGulLO3//PHS1//COS1 GO:0010584 pollen exine formation BP 0.0470773045682988 LTP12//AT2G03740//AT2G02970 GO:0009967 positive regulation of signal transducti... BP 0.0488578385818915 ATB//CDG1 GO:0023056 positive regulation of signaling BP 0.0488578385818915 ATB//CDG1 GO:0051186 cofactor metabolic process BP 0.0489916234339768 CYP97A3//PIF5//GSA2//PHS1//AtVAB2//CH-42//ATCLH1//AT3G27240//HEME1//AT1G48230//AT2G24580//ATCPO-I//CAS1//AT2G26730 GO:0009072 aromatic amino acid family metabolic pro... BP 0.0494789633561156 AT5G22340//PIF5//GSA2//HEME1//AT2G17500//AT2G17033//ATCPO-I GO:0007033 vacuole organization BP 0.0506112684696696 emb2448//ATVHA-C//ATSKD1 GO:0048522 positive regulation of cellular process BP 0.0515140948415739 SMP2//L1L//AT5G01300//PIF5//ATBZIP61//BME3//GSA2//AME3//ATB//CDG1//ATXRCC1//AT1G30455//EVR//ATCPO-I//ATBZIP34 GO:0044700 single organism signaling BP 0.0537605772423753 AT3//AT5G25510//AT5G24810//ALNS//AT5G54200//AT5G53500//L1L//AtPP2-A6//AtCAF1b//AtRABH1e//PIF5//ATBZIP61//ATPEN3//AT3G48760//ATGB3//XLG2//ATHXK1//ATB//ATCLH1//RALFL27//AT3G13430//CDG1//ATERF1//ARFB1C//AT1G72180//AT1G63730//ORA59//AT1G07650//ATERF11//EVR//AT1G27190//ATBZIP34//COS1//AT2G26730 GO:0000272 polysaccharide catabolic process BP 0.0542704540764919 SLP2//ATXYL1//AT2G26730 GO:0010208 pollen wall assembly BP 0.0542704540764919 LTP12//AT2G03740//AT2G02970 GO:0010927 cellular component assembly involved in ... BP 0.0542704540764919 LTP12//AT2G03740//AT2G02970 GO:0085029 extracellular matrix assembly BP 0.0542704540764919 LTP12//AT2G03740//AT2G02970 GO:0023052 signaling BP 0.0549255401946699 AT3//AT5G25510//AT5G24810//ALNS//AT5G54200//AT5G53500//L1L//AtPP2-A6//AtCAF1b//AtRABH1e//PIF5//ATBZIP61//ATPEN3//AT3G48760//ATGB3//XLG2//ATHXK1//ATB//ATCLH1//RALFL27//AT3G13430//CDG1//ATERF1//ARFB1C//AT1G72180//AT1G63730//ORA59//AT1G07650//ATERF11//EVR//AT1G27190//ATBZIP34//COS1//AT2G26730 GO:0010647 positive regulation of cell communicatio... BP 0.0549759905643969 ATB//CDG1 GO:0009664 plant-type cell wall organization BP 0.0566841159249972 AT4G14360//AGP8//AT3G45810//SLP2//AtCESA1//AGL11//ATXYL1//AT1G04680//AT2G26730 GO:0010106 cellular response to iron ion starvation BP 0.058010326840599 BAT1//BTS//ATWRKY9//ZIP3 GO:0006816 calcium ion transport BP 0.0597542175322697 AtCESA1//AT4G28770//emb2448//JAL35//ATVHA-C GO:0007165 signal transduction BP 0.0598332137082477 AT3//AT5G25510//AT5G24810//ALNS//AT5G54200//AT5G53500//L1L//AtPP2-A6//AtCAF1b//AtRABH1e//PIF5//ATBZIP61//ATPEN3//AT3G48760//ATGB3//XLG2//ATHXK1//ATB//ATCLH1//AT3G13430//CDG1//ATERF1//ARFB1C//AT1G72180//AT1G63730//ORA59//AT1G07650//ATERF11//EVR//AT1G27190//ATBZIP34//COS1//AT2G26730 GO:0046148 pigment biosynthetic process BP 0.0609632437486606 CYP97A3//PIF5//GSA2//CH-42//ATCPO-I//CAS1//ATRNS1//AT2G32640 GO:0034220 ion transmembrane transport BP 0.0618464712615071 ATCHX25//ATCHX20//AtVAB2//emb2448//ATVHA-C//ZIP3