GOID TERM ONTOLOGY pValue Genes GO:0009888 tissue development BP 0.00344148165348459 SPK1//ATE2FB//CYCD4;1//AT5G63990//CYCP4//AIL5//SPCH//AT5G15120//SIM//TBL3//ANAC076//AT4G28650//SRF8//BAM3//AT3G06220//AtPERK13//BUM//REB1//CDKB2;2//AT1G10180//FIE2 GO:0009624 response to nematode BP 0.00470910544326404 ATGPT1//ATMAP65-3//SRF8//ATGPT2 GO:0051225 spindle assembly BP 0.00523388926457394 AT4G15830//ATMAP65-3//CDKB2;2//ATVLN1 GO:0007051 spindle organization BP 0.00579644177639179 AT4G15830//ATMAP65-3//CDKB2;2//ATVLN1 GO:0000226 microtubule cytoskeleton organization BP 0.00692826808297594 AT4G15830//SPK1//ATMAP65-3//TON1//AT3G51720//PFD6//CDKB2;2//ATVLN1 GO:0007017 microtubule-based process BP 0.00710737259863418 AT4G15830//SPK1//AT5G66310//ATMAP65-3//TON1//AT3G51720//PFD6//CDKB2;2//ATVLN1 GO:0006468 protein phosphorylation BP 0.0100160338294747 AT5G65600//CYCD4;1//CYCP4//AT5G59270//ATMAP65-3//SIM//AT3G53380//AT4G28650//AT4G25160//SRF8//BAM3//AT1G72760//AtPERK13//AT2G43850//CDKB2;2//ATVLN1//AT1G61370 GO:0070925 organelle assembly BP 0.010883856306123 AT4G15830//ATMAP65-3//CDKB2;2//ATVLN1 GO:0009799 specification of symmetry BP 0.0113638569392163 SPK1//AT5G25475//BAM3//AT3G06220//BUM//AT1G10180 GO:0009855 determination of bilateral symmetry BP 0.0113638569392163 SPK1//AT5G25475//BAM3//AT3G06220//BUM//AT1G10180 GO:0009933 meristem structural organization BP 0.0125142892211791 SPK1//AIL5//TBL3//BAM3//AT3G06220//BUM//CDKB2;2//AT1G10180 GO:0048532 anatomical structure arrangement BP 0.0134544405447115 SPK1//AIL5//TBL3//BAM3//AT3G06220//BUM//CDKB2;2//AT1G10180 GO:0016310 phosphorylation BP 0.0137016882122936 AT5G65600//CYCD4;1//AT5G63990//CYCP4//AT5G59270//ATMAP65-3//SIM//AT3G53380//AT4G28650//AT4G25160//SRF8//BAM3//AT1G72760//AtPERK13//AT2G43850//CDKB2;2//ATVLN1//AT1G61370//CYP71A13 GO:0010639 negative regulation of organelle organiz... BP 0.0165137413801174 SIM//ATVLN1 GO:0015718 monocarboxylic acid transport BP 0.0165137413801174 ATGPT1//ATGPT2 GO:0051129 negative regulation of cellular componen... BP 0.0165137413801174 SIM//ATVLN1 GO:0042023 DNA endoreduplication BP 0.0169151214977796 ATE2FB//CYCD4;1//ATMAP65-3//SIM//CDKB2;2 GO:0044786 cell cycle DNA replication BP 0.0169151214977796 ATE2FB//CYCD4;1//ATMAP65-3//SIM//CDKB2;2 GO:0090558 plant epidermis development BP 0.0175527395547076 SPK1//ATE2FB//CYCD4;1//AT5G63990//CYCP4//SPCH//SIM//AT4G28650//BAM3//AtPERK13//REB1 GO:0000911 cytokinesis by cell plate formation BP 0.0190719922831557 AT4G15830//SPK1//ATMAP65-3//TON1//AT3G51720//CDKB2;2//ATVLN1 GO:0043170 macromolecule metabolic process BP 0.0193459097350729 scpl30//ATE2FB//ATWRKY74//AT5G25475//AT5G65600//CYCD4;1//AT5G63990//CYCP4//AT5G59270//AIL5//SPCH//ATMAP65-3//AT5G51300//anac097//AT5G47700//ATERF-9//anac095//AT5G15120//AT5G10540//AT5G09880//OBF4//AT5G09770//scpl35//SIM//TBL3//AT3G62650//MAP2B//TON1//AT3G53380//AtPP2-A15//AT3G51110//OBP1//AT3G48480//AT3G45700//RPS15AD//ANAC076//XCP1//AT4G33865//AT4G28650//AT4G25160//SRF8//BAM3//AT4G18330//SMAP1//AT4G02840//AT1G16740//AT2G33370//AT3G06220//DHAR2//AT1G33350//ATUNG//AT3G19000//QQS//MOS4//IAA31//LON3//AT3G10820//AT1G72270//AT1G72760//PFD6//AT1G73820//AT1G74270//AtPERK13//AT2G43850//BUM//AT1G21510//AT1G14340//AT1G01100//AT1G16040//AT1G22490//REB1//AT1G64100//RTV1//AT1G47655//PTAC6//CDKB2;2//ATVLN1//AT2G22200//NRPB6B//AT1G60240//AT1G10180//AT1G61370//SCPL32//AT1G27160//LAS//FIE2//ATHB21//AtWRKY35 GO:0032506 cytokinetic process BP 0.0228077768737901 AT4G15830//SPK1//ATMAP65-3//TON1//AT3G51720//CDKB2;2//ATVLN1 GO:1902410 mitotic cytokinetic process BP 0.0228077768737901 AT4G15830//SPK1//ATMAP65-3//TON1//AT3G51720//CDKB2;2//ATVLN1 GO:0030865 cortical cytoskeleton organization BP 0.0235857183014525 TON1//PFD6 GO:0046519 sphingoid metabolic process BP 0.0235857183014525 AT4G39830//LCBK2 GO:0000281 mitotic cytokinesis BP 0.025277350401596 AT4G15830//SPK1//ATMAP65-3//TON1//AT3G51720//CDKB2;2//ATVLN1 GO:0061640 cytoskeleton-dependent cytokinesis BP 0.0261397599457629 AT4G15830//SPK1//ATMAP65-3//TON1//AT3G51720//CDKB2;2//ATVLN1 GO:0010089 xylem development BP 0.0296433981976224 CYCD4;1//AT5G15120//TBL3//ANAC076 GO:0051301 cell division BP 0.0299878240278998 AT4G15830//SPK1//ATE2FB//ATMAP65-3//SIM//TON1//AT3G51720//CDKB2;2//ATVLN1 GO:0014070 response to organic cyclic compound BP 0.0330923203737137 AT4G15830//AT5G25475//DFL1//DIR1//AT5G15120//OBP1//ANAC076//DHAR2//PMZ//AT1G10180//AtFBS1//ATEXT1//CYP71A13 GO:0000079 regulation of cyclin-dependent protein s... BP 0.0333347266406183 CYCD4;1//CYCP4//SIM GO:0048507 meristem development BP 0.0338068269969432 SPK1//AIL5//TBL3//AT4G28650//SRF8//BAM3//AT3G06220//BUM//CDKB2;2//AT1G10180 GO:0019222 regulation of metabolic process BP 0.0355092069806916 ATE2FB//ATWRKY74//AT5G25475//CYCD4;1//CYCP4//AIL5//SPCH//ATMAP65-3//anac097//ATERF-9//anac095//AT5G15120//OBF4//SIM//AT3G55470//OBP1//ANAC076//SMAP1//AT3G06220//AT3G19000//IAA31//AT3G10820//AT1G72270//BUM//AT1G22490//AT1G64100//RTV1//AT1G47655//PTAC6//CDKB2;2//ATVLN1//AT2G22200//AT1G60240//ATGPT2//AT1G10180//LAS//FIE2//ATHB21//AtWRKY35//CYP71A13 GO:0000910 cytokinesis BP 0.035888698085401 AT4G15830//SPK1//ATMAP65-3//TON1//AT3G51720//CDKB2;2//ATVLN1 GO:0009751 response to salicylic acid BP 0.035888698085401 DIR1//AT5G15120//OBP1//PMZ//AtFBS1//ATEXT1//CYP71A13 GO:0045787 positive regulation of cell cycle BP 0.0406769442393164 ATE2FB//OBP1 GO:0031323 regulation of cellular metabolic process BP 0.0408061133070571 ATE2FB//ATWRKY74//AT5G25475//CYCD4;1//CYCP4//AIL5//SPCH//ATMAP65-3//anac097//ATERF-9//anac095//AT5G15120//OBF4//SIM//OBP1//ANAC076//AT3G06220//IAA31//AT3G10820//AT1G72270//BUM//AT1G22490//AT1G64100//RTV1//AT1G47655//PTAC6//CDKB2;2//ATVLN1//AT2G22200//AT1G60240//ATGPT2//LAS//ATHB21//AtWRKY35//CYP71A13 GO:0009059 macromolecule biosynthetic process BP 0.0415242138776983 ATE2FB//ATWRKY74//AT5G25475//CYCD4;1//AIL5//SPCH//ATMAP65-3//anac097//AT5G47700//ATERF-9//anac095//OBF4//AT5G09770//SIM//TBL3//AtPP2-A15//OBP1//AT3G45700//RPS15AD//ANAC076//XCP1//AT4G33865//BAM3//AT4G18330//AT1G16740//AT2G33370//AT3G06220//AT1G33350//ATUNG//AT3G19000//QQS//IAA31//AT3G10820//AT1G74270//BUM//AT1G21510//AT1G01100//AT1G16040//AT1G22490//REB1//AT1G64100//RTV1//AT1G47655//PTAC6//CDKB2;2//ATVLN1//AT2G22200//NRPB6B//AT1G60240//AT1G27160//LAS//ATHB21//AtWRKY35 GO:1903047 mitotic cell cycle process BP 0.0435959645719839 AT4G15830//SPK1//ATMAP65-3//SIM//TON1//AT3G51720//CDKB2;2//ATVLN1 GO:0042127 regulation of cell proliferation BP 0.0445219021907934 ATE2FB//SPCH//AT3G51720//ATVLN1 GO:0010087 phloem or xylem histogenesis BP 0.0487887450356883 CYCD4;1//AT5G15120//TBL3//ANAC076 GO:0060255 regulation of macromolecule metabolic pr... BP 0.0488475650093063 ATE2FB//ATWRKY74//AT5G25475//CYCD4;1//CYCP4//AIL5//SPCH//ATMAP65-3//anac097//ATERF-9//anac095//OBF4//SIM//OBP1//ANAC076//SMAP1//AT3G06220//IAA31//AT3G10820//AT1G72270//BUM//AT1G22490//AT1G64100//RTV1//AT1G47655//PTAC6//CDKB2;2//ATVLN1//AT2G22200//AT1G60240//AT1G10180//LAS//FIE2//ATHB21//AtWRKY35 GO:1901264 carbohydrate derivative transport BP 0.0505182918621146 ATGPT1//ATGPT2 GO:0034645 cellular macromolecule biosynthetic proc... BP 0.0506261030590106 ATE2FB//ATWRKY74//AT5G25475//CYCD4;1//AIL5//SPCH//ATMAP65-3//anac097//AT5G47700//ATERF-9//anac095//OBF4//AT5G09770//SIM//TBL3//AtPP2-A15//OBP1//AT3G45700//RPS15AD//ANAC076//XCP1//AT4G33865//AT4G18330//AT1G16740//AT2G33370//AT3G06220//AT1G33350//ATUNG//AT3G19000//QQS//IAA31//AT3G10820//AT1G74270//BUM//AT1G21510//AT1G01100//AT1G16040//AT1G22490//REB1//AT1G64100//RTV1//AT1G47655//PTAC6//CDKB2;2//ATVLN1//AT2G22200//NRPB6B//AT1G60240//AT1G27160//LAS//ATHB21//AtWRKY35 GO:0009733 response to auxin BP 0.051757226792039 ATE2FB//AIL5//DFL1//OBP1//SMAP1//PMZ//IAA31//AT1G75590 GO:0000278 mitotic cell cycle BP 0.0519569137695229 AT4G15830//SPK1//ATE2FB//CYCD4;1//ATMAP65-3//SIM//TON1//AT3G51720//CDKB2;2//ATVLN1 GO:0044260 cellular macromolecule metabolic process BP 0.0534533613201586 ATE2FB//ATWRKY74//AT5G25475//AT5G65600//CYCD4;1//AT5G63990//CYCP4//AT5G59270//AIL5//SPCH//ATMAP65-3//AT5G51300//anac097//AT5G47700//ATERF-9//anac095//AT5G15120//AT5G09880//OBF4//AT5G09770//SIM//TBL3//AT3G62650//TON1//AT3G53380//AtPP2-A15//AT3G51110//OBP1//AT3G45700//RPS15AD//ANAC076//XCP1//AT4G33865//AT4G28650//AT4G25160//SRF8//BAM3//AT4G18330//AT4G02840//AT1G16740//AT2G33370//AT3G06220//DHAR2//AT1G33350//ATUNG//AT3G19000//QQS//MOS4//IAA31//LON3//AT3G10820//AT1G72270//AT1G72760//PFD6//AT1G73820//AT1G74270//AtPERK13//AT2G43850//BUM//AT1G21510//AT1G14340//AT1G01100//AT1G16040//AT1G22490//REB1//AT1G64100//RTV1//AT1G47655//PTAC6//CDKB2;2//ATVLN1//AT2G22200//NRPB6B//AT1G60240//AT1G10180//AT1G61370//AT1G27160//LAS//FIE2//ATHB21//AtWRKY35 GO:0045736 negative regulation of cyclin-dependent ... BP 0.0557266982949476 CYCD4;1//SIM GO:0048509 regulation of meristem development BP 0.0559664387527266 SPK1//SRF8//BAM3//BUM//CDKB2;2 GO:0010467 gene expression BP 0.0575917849011189 ATE2FB//ATWRKY74//AT5G25475//AIL5//SPCH//ATMAP65-3//AT5G51300//anac097//AT5G47700//ATERF-9//anac095//AT5G09880//OBF4//AT5G09770//MAP2B//AT3G51110//OBP1//RPS15AD//ANAC076//AT4G33865//AT4G18330//SMAP1//AT1G16740//AT2G33370//AT3G06220//IAA31//AT3G10820//AT1G73820//AT1G74270//BUM//AT1G01100//AT1G22490//AT1G64100//RTV1//AT1G47655//PTAC6//ATVLN1//AT2G22200//NRPB6B//AT1G60240//AT1G10180//AT1G27160//LAS//FIE2//ATHB21//AtWRKY35 GO:0019220 regulation of phosphate metabolic proces... BP 0.0579757118738036 CYCD4;1//CYCP4//SIM//PTAC6 GO:0031399 regulation of protein modification proce... BP 0.0579757118738036 CYCD4;1//CYCP4//SIM//PTAC6 GO:0051174 regulation of phosphorus metabolic proce... BP 0.0579757118738036 CYCD4;1//CYCP4//SIM//PTAC6 GO:0006665 sphingolipid metabolic process BP 0.0611140054386754 AT4G39830//LCBK2 GO:0030838 positive regulation of actin filament po... BP 0.0625018320392491 SPK1//ATMAP65-3//ATVLN1 GO:0031334 positive regulation of protein complex a... BP 0.0625018320392491 SPK1//ATMAP65-3//ATVLN1 GO:0032273 positive regulation of protein polymeriz... BP 0.0625018320392491 SPK1//ATMAP65-3//ATVLN1 GO:0045010 actin nucleation BP 0.0625018320392491 SPK1//ATMAP65-3//ATVLN1 GO:0071900 regulation of protein serine/threonine k... BP 0.0625018320392491 CYCD4;1//CYCP4//SIM GO:0043549 regulation of kinase activity BP 0.0659042446064588 CYCD4;1//CYCP4//SIM GO:0044089 positive regulation of cellular componen... BP 0.0659042446064588 SPK1//ATMAP65-3//ATVLN1 GO:0045859 regulation of protein kinase activity BP 0.0659042446064588 CYCD4;1//CYCP4//SIM GO:0051495 positive regulation of cytoskeleton orga... BP 0.0659042446064588 SPK1//ATMAP65-3//ATVLN1 GO:0001932 regulation of protein phosphorylation BP 0.0693900200536413 CYCD4;1//CYCP4//SIM GO:0051338 regulation of transferase activity BP 0.0693900200536413 CYCD4;1//CYCP4//SIM GO:0008643 carbohydrate transport BP 0.07238841006068 ATGPT1//ATGPT2 GO:0010014 meristem initiation BP 0.0724900181699703 SPK1//TBL3//BAM3//AT3G06220//AT1G10180 GO:0042325 regulation of phosphorylation BP 0.0729577427088123 CYCD4;1//CYCP4//SIM GO:0008064 regulation of actin polymerization or de... BP 0.0766059531765542 SPK1//ATMAP65-3//ATVLN1 GO:0030832 regulation of actin filament length BP 0.0766059531765542 SPK1//ATMAP65-3//ATVLN1 GO:0030833 regulation of actin filament polymerizat... BP 0.0766059531765542 SPK1//ATMAP65-3//ATVLN1 GO:0032271 regulation of protein polymerization BP 0.0766059531765542 SPK1//ATMAP65-3//ATVLN1 GO:0032956 regulation of actin cytoskeleton organiz... BP 0.0766059531765542 SPK1//ATMAP65-3//ATVLN1 GO:0032970 regulation of actin filament-based proce... BP 0.0766059531765542 SPK1//ATMAP65-3//ATVLN1 GO:0043254 regulation of protein complex assembly BP 0.0766059531765542 SPK1//ATMAP65-3//ATVLN1 GO:0008283 cell proliferation BP 0.0766961312140882 ATE2FB//SPCH//ATMAP65-3//AT3G51720//AT3G06220//CDKB2;2//ATVLN1 GO:0051726 regulation of cell cycle BP 0.0766961312140882 ATE2FB//CYCD4;1//CYCP4//ATMAP65-3//SIM//OBP1//CDKB2;2 GO:0022402 cell cycle process BP 0.0783080804214415 AT4G15830//SPK1//ATE2FB//CYCD4;1//ATMAP65-3//SIM//TON1//AT3G51720//AT1G72270//CDKB2;2//ATVLN1 GO:0007049 cell cycle BP 0.0792738174501276 AT4G15830//SPK1//ATE2FB//WIH1//CYCD4;1//CYCP4//ATMAP65-3//SIM//TON1//AT3G51720//OBP1//AT1G72270//CDKB2;2//ATVLN1 GO:0009653 anatomical structure morphogenesis BP 0.0798302757989568 SPK1//ATE2FB//LSH1//AT5G27980//AT5G25475//AT5G63990//CYCP4//AIL5//DFL1//SPCH//ATMAP65-3//TBL3//AT4G28650//BAM3//AT3G06220//AtPERK13//BUM//REB1//PTAC6//CDKB2;2//ATVLN1//AT1G10180//LAS GO:0010016 shoot system morphogenesis BP 0.080254440949476 AT5G25475//SPCH//AT4G28650//AT3G06220//BUM//PTAC6//ATVLN1//LAS GO:0009696 salicylic acid metabolic process BP 0.0803331519802371 AT4G39830//UGT74F1//CYP71A13 GO:0051493 regulation of cytoskeleton organization BP 0.0803331519802371 SPK1//ATMAP65-3//ATVLN1 GO:0006857 oligopeptide transport BP 0.0841378030505941 ATERF-9//OBF4//AT3G45700 GO:0007267 cell-cell signaling BP 0.0841378030505941 AT5G25475//RALFL26//AT1G10180 GO:0008154 actin polymerization or depolymerization BP 0.0841378030505941 SPK1//ATMAP65-3//ATVLN1 GO:0015833 peptide transport BP 0.0841378030505941 ATERF-9//OBF4//AT3G45700 GO:0030041 actin filament polymerization BP 0.0841378030505941 SPK1//ATMAP65-3//ATVLN1 GO:0048439 flower morphogenesis BP 0.0841378030505941 AT5G25475//AT3G06220//BUM GO:0046785 microtubule polymerization BP 0.0842706335890645 SPK1//ATMAP65-3 GO:0080090 regulation of primary metabolic process BP 0.0844808842387276 ATE2FB//ATWRKY74//AT5G25475//CYCD4;1//CYCP4//AIL5//SPCH//ATMAP65-3//anac097//ATERF-9//anac095//OBF4//SIM//AT3G55470//OBP1//ANAC076//AT3G06220//IAA31//AT3G10820//AT1G72270//BUM//AT1G22490//AT1G64100//RTV1//AT1G47655//PTAC6//CDKB2;2//ATVLN1//AT2G22200//AT1G60240//LAS//ATHB21//AtWRKY35 GO:0031109 microtubule polymerization or depolymeri... BP 0.0904187788267433 SPK1//ATMAP65-3 GO:0033043 regulation of organelle organization BP 0.0939297923157662 SPK1//ATMAP65-3//SIM//AT1G72270//ATVLN1 GO:0010033 response to organic substance BP 0.0950866365392182 AT4G15830//ATE2FB//AGP31//AT5G25475//AT5G65600//CYCD4;1//AT5G63990//AIL5//DFL1//DIR1//ATERF-9//AT5G15120//OBF4//OBP1//ANAC076//AT4G28650//AT4G25160//ATHB22//SMAP1//DHAR2//PMZ//IAA31//CDKB2;2//AT1G75590//ATGPT2//AT1G10180//AT1G05340//AtFBS1//ATEXT1//AT2G35120//CYP71A13 GO:0044036 cell wall macromolecule metabolic proces... BP 0.0971748510948642 CYCD4;1//AT5G15120//TBL3//AT3G45700//XCP1//REB1 GO:0048869 cellular developmental process BP 0.100011030561968 SPK1//ATE2FB//LSH1//AT5G27980//WIH1//CYCD4;1//AT5G63990//CYCP4//DFL1//SIM//TON1//EDA40//XCP1//BAM3//AtPERK13//BUM//REB1//PTAC6 GO:0007389 pattern specification process BP 0.101318255532395 SPK1//AT5G25475//AIL5//BAM3//AT3G06220//BUM//AT1G10180 GO:0009690 cytokinin metabolic process BP 0.103089714109732 EDA40//BUM GO:0015748 organophosphate ester transport BP 0.103089714109732 ATGPT1//ATGPT2 GO:0010583 response to cyclopentenone BP 0.103091391396317 AT4G15830//DFL1//DHAR2//PMZ