phyB Rc50 |
GOID/Term | Ontology | p-value | Genes |
---|---|---|---|
GO:0009150 purine ribonucleotide metabolic process | BP | 3.699e-03 | AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050 |
GO:0006163 purine nucleotide metabolic process | BP | 4.043e-03 | AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050 AGK1 |
GO:0046271 phenylpropanoid catabolic process | BP | 4.541e-03 | LAC11 LAC6 LAC3 |
GO:0046274 lignin catabolic process | BP | 4.541e-03 | LAC11 LAC6 LAC3 |
GO:0009116 nucleoside metabolic process | BP | 4.591e-03 | AtNUDT11 AT5G18800 ACA11 AT4G24350 emb2448 AT1G51650 HMG2 AT2G02050 |
GO:0071555 cell wall organization | BP | 4.908e-03 | AT5G36260 EXT13 ATEXO70C2 PAS2 CASP4 PME35 ADPG1 AT3G52580 AT4G39130 EOL1 AT3G02480 AT3G02880 CASP2 AT3G16370 CER6 AT1G11590 AT1G64190 CASP1 ATNRT1 |
GO:0042278 purine nucleoside metabolic process | BP | 5.699e-03 | AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050 |
GO:0046128 purine ribonucleoside metabolic process | BP | 5.699e-03 | AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050 |
GO:0009119 ribonucleoside metabolic process | BP | 8.947e-03 | AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050 |
GO:0045229 external encapsulating structure organiz... | BP | 8.982e-03 | AT5G36260 EXT13 ATEXO70C2 PAS2 CASP4 PME35 ADPG1 AT3G52580 AT4G39130 EOL1 AT3G02480 AT3G02880 CASP2 AT3G16370 CER6 AT1G11590 AT1G64190 CASP1 ATNRT1 |
GO:0072521 purine-containing compound metabolic pro... | BP | 9.166e-03 | AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050 AGK1 |
GO:0042545 cell wall modification | BP | 1.066e-02 | AT5G36260 ATEXO70C2 CASP4 PME35 ADPG1 AT3G52580 AT4G39130 EOL1 AT3G02480 CASP2 AT1G11590 CASP1 |
GO:1901657 glycosyl compound metabolic process | BP | 1.104e-02 | AtNUDT11 AT5G18800 ACA11 ATMEK1 AT4G24350 BASS5 emb2448 AT1G51650 ATNRT1 HMG2 FMO AT2G02050 |
GO:0000038 very long-chain fatty acid metabolic pro... | BP | 1.270e-02 | PAS2 KCS16 AT3G16370 CER6 |
GO:0009694 jasmonic acid metabolic process | BP | 1.286e-02 | AtRGL3 CYP94B1 PLAT1 OPCL1 CER6 GRX480 |
GO:0052541 plant-type cell wall cellulose metabolic... | BP | 1.366e-02 | AT3G02880 AT1G64190 ATNRT1 |
GO:0048447 sepal morphogenesis | BP | 1.839e-02 | IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin |
GO:0048451 petal formation | BP | 1.839e-02 | IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin |
GO:0048453 sepal formation | BP | 1.839e-02 | IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin |
GO:0009410 response to xenobiotic stimulus | BP | 1.860e-02 | ATMSH3 GRX480 TGA7 AT2G13150 |
GO:0009409 response to cold | BP | 2.227e-02 | HEMC HAI1 KCS19 ATMEK1 ABCB2 HAP6 emb2448 RCI2B BGLU23 JAL35 CER6 GRX480 RCI3 ANNAT4 |
GO:0048442 sepal development | BP | 2.249e-02 | IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin |
GO:0048464 flower calyx development | BP | 2.249e-02 | IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin |
GO:0055086 nucleobase-containing small molecule met... | BP | 2.467e-02 | HEMC NAPRT1 AT5G59240 AtNUDT11 AT5G18800 ACA11 AT4G24350 emb2448 AT1G51650 AT3G02360 CER6 AT1G64190 EMB1968 HMG2 AT2G02050 MEE25 AGK1 |
GO:0009117 nucleotide metabolic process | BP | 2.507e-02 | HEMC NAPRT1 AT5G59240 AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 AT3G02360 CER6 AT1G64190 EMB1968 HMG2 AT2G02050 MEE25 AGK1 |
GO:0046034 ATP metabolic process | BP | 2.552e-02 | AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050 |
GO:0006753 nucleoside phosphate metabolic process | BP | 2.567e-02 | HEMC NAPRT1 AT5G59240 AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 AT3G02360 CER6 AT1G64190 EMB1968 HMG2 AT2G02050 MEE25 AGK1 |
GO:0048446 petal morphogenesis | BP | 2.713e-02 | IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin |
GO:0009830 cell wall modification involved in absci... | BP | 2.828e-02 | ADPG1 AT3G02480 |
GO:0044277 cell wall disassembly | BP | 2.828e-02 | ADPG1 AT3G02480 |
GO:0009144 purine nucleoside triphosphate metabolic... | BP | 3.055e-02 | AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050 |
GO:0009199 ribonucleoside triphosphate metabolic pr... | BP | 3.055e-02 | AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050 |
GO:0009205 purine ribonucleoside triphosphate metab... | BP | 3.055e-02 | AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050 |
GO:0030154 cell differentiation | BP | 3.092e-02 | HEMC AT5G36260 EXT13 GSA1 ATEXO70C2 PAS2 ADPG1 IMK3 BIR6 AT4G39130 PORB ARP2 AT3G02880 AT3G16370 ATNAS4 CER6 ADF11 PCR11 CPC RCI3 UCC1 ARSK1 AtMYB88 |
GO:0009753 response to jasmonic acid | BP | 3.403e-02 | AtRGL3 CYP94B1 HAI1 ATMIXTA ATMEK1 BASS5 JAL35 OPCL1 GRX480 ATWRKY60 CPC |
GO:0044281 small molecule metabolic process | BP | 3.415e-02 | HEMC NAPRT1 AtRGL3 AT5G35180 CYP94B1 GSA1 AT5G59240 FPS1 AtNUDT11 AT5G23820 AT5G18800 PAS2 KCS19 ACA11 AT3G56580 PLAT1 KCS16 PORB ATMEK1 AT4G24350 BASS5 emb2448 EOL1 ATT1 AT1G51650 AT3G02360 ABCG15 CYP705A22 HEME1 AT3G16370 JAL35 OPCL1 ATNAS4 CER6 GRX480 AT1G71870 NQR AT1G64190 AT1G23450 EMB1968 ATWRKY60 APG10 ABS2 ATNRT1 RCI3 ATKAO1 HMG2 FMO AT2G02050 ALD1 MEE25 AGK1 |
GO:0009141 nucleoside triphosphate metabolic proces... | BP | 3.422e-02 | AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050 |
GO:0009611 response to wounding | BP | 3.456e-02 | CYP94B1 HAI1 PLAT1 ATMEK1 AT4G24350 BASS5 JAL35 OPCL1 GRX480 |
GO:0009126 purine nucleoside monophosphate metaboli... | BP | 3.616e-02 | AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050 |
GO:0009167 purine ribonucleoside monophosphate meta... | BP | 3.616e-02 | AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050 |
GO:0050896 response to stimulus | BP | 3.681e-02 | ATMSH3 AT4G17720 FBH3 ATSK42 HEMC AtRGL3 AT5G35180 CYP94B1 GSA1 HAI1 AT5G57480 FPS1 AT5G41550 ATORC3 AT5G15180 ATMIXTA PAS2 AT5G09800 KCS19 BRH1 AT3G60540 AT3G57680 ACA11 AT3G56580 IMK3 AT3G54930 AT3G53250 IMK2 PLAT1 AT4G39130 ATPLC1 AT4G34220 KCS16 PORB ATMEK1 ABCB2 AT4G24350 IM HAP6 SNI1 BASS5 emb2448 EOL1 ATMSH6 14-3-3EPSILON AT1G19200 AT3G12100 AT3G02360 AT5MAT ABCG15 CYP705A22 AT3G27210 HEME1 PMP ATPUB29 ARP2 AFB2 AT3G02480 AT3G02880 AT3G08660 RCI2B BGLU23 AT3G05000 AT3G16370 JAL35 OPCL1 MLP165 CER6 TTL1 ATRAB-A2B RKL1 GRX480 AtRLP4 AT1G71870 AT1G71695 NQR AT1G18340 AT1G33670 TGA7 AT1G64190 POLD3 ATGPX2 ATWRKY60 CPC ABS2 ATNRT1 RCI3 AT1G23030 AT2G02050 ALD1 AtRLP21 AT2G13150 AT2G15010 ANNAT4 AtCLE6 GH3.1 AT2G19780 |
GO:0009259 ribonucleotide metabolic process | BP | 3.691e-02 | AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 EMB1968 HMG2 AT2G02050 |
GO:0016053 organic acid biosynthetic process | BP | 3.859e-02 | HEMC AtRGL3 AT5G35180 GSA1 PAS2 KCS19 AT3G56580 PLAT1 KCS16 PORB ATMEK1 EOL1 HEME1 JAL35 OPCL1 ATNAS4 CER6 GRX480 AT1G23450 ATWRKY60 APG10 ATKAO1 ALD1 |
GO:0046394 carboxylic acid biosynthetic process | BP | 3.859e-02 | HEMC AtRGL3 AT5G35180 GSA1 PAS2 KCS19 AT3G56580 PLAT1 KCS16 PORB ATMEK1 EOL1 HEME1 JAL35 OPCL1 ATNAS4 CER6 GRX480 AT1G23450 ATWRKY60 APG10 ATKAO1 ALD1 |
GO:0009664 plant-type cell wall organization | BP | 3.912e-02 | AT5G36260 EXT13 ATEXO70C2 ADPG1 AT3G52580 AT4G39130 AT3G02480 AT3G02880 AT3G16370 AT1G64190 ATNRT1 |
GO:0009161 ribonucleoside monophosphate metabolic p... | BP | 4.022e-02 | AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050 |
GO:1901659 glycosyl compound biosynthetic process | BP | 4.100e-02 | AtNUDT11 ACA11 ATMEK1 BASS5 emb2448 AT1G51650 ATNRT1 FMO |
GO:0009069 serine family amino acid metabolic proce... | BP | 4.190e-02 | HEMC AT5G35180 GSA1 AT5G23820 PAS2 PORB EOL1 JAL35 CER6 |
GO:0009123 nucleoside monophosphate metabolic proce... | BP | 4.456e-02 | AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050 |
GO:0009152 purine ribonucleotide biosynthetic proce... | BP | 4.527e-02 | AtNUDT11 ACA11 emb2448 AT1G51650 |
GO:0048444 floral organ morphogenesis | BP | 4.538e-02 | AtRGL3 IMK3 SNI1 ATMSH6 AT1G72250 ATVAMP726 EMB1968 AtHaspin |
GO:0048563 post-embryonic organ morphogenesis | BP | 4.538e-02 | AtRGL3 IMK3 SNI1 ATMSH6 AT1G72250 ATVAMP726 EMB1968 AtHaspin |
GO:0048449 floral organ formation | BP | 4.684e-02 | IMK3 SNI1 ATMSH6 AT1G72250 ATVAMP726 EMB1968 AtHaspin |
GO:1901564 organonitrogen compound metabolic proces... | BP | 4.782e-02 | HEMC NAPRT1 AT5G35180 GSA1 FPS1 AtNUDT11 AT5G23820 AT5G18800 PAS2 AT3G57680 ACA11 AT3G56580 PORB AT4G24350 emb2448 EOL1 AT1G51650 AT3G02360 HEME1 AT3G15710 JAL35 ATNAS4 CER6 AT1G64190 AT1G34640 EMB1968 APG10 HMG2 AT2G02050 ALD1 AGK1 |
GO:0034220 ion transmembrane transport | BP | 4.857e-02 | ATCHX12 ACA11 BASS5 emb2448 AT1G51650 AT3G02360 BGLU15 |
GO:0006816 calcium ion transport | BP | 4.916e-02 | FPS1 ACA11 emb2448 PMP JAL35 |
GO:0019693 ribose phosphate metabolic process | BP | 4.958e-02 | HEMC AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 AT3G02360 AT1G64190 EMB1968 HMG2 AT2G02050 |
GO:0006778 porphyrin-containing compound metabolic ... | BP | 5.098e-02 | HEMC GSA1 AT3G57680 PORB HEME1 CER6 |
GO:0033013 tetrapyrrole metabolic process | BP | 5.098e-02 | HEMC GSA1 AT3G57680 PORB HEME1 CER6 |
GO:0010200 response to chitin | BP | 5.168e-02 | AT5G09800 BRH1 ATMEK1 ATPUB29 AT3G02880 OPCL1 ATWRKY60 AT1G23030 |
GO:0006518 peptide metabolic process | BP | 5.329e-02 | AT3G15710 AT1G34640 |
GO:0042775 mitochondrial ATP synthesis coupled elec... | BP | 5.329e-02 | AT5G18800 AT2G02050 |
GO:0042451 purine nucleoside biosynthetic process | BP | 5.412e-02 | AtNUDT11 ACA11 emb2448 AT1G51650 |
GO:0046129 purine ribonucleoside biosynthetic proce... | BP | 5.412e-02 | AtNUDT11 ACA11 emb2448 AT1G51650 |
GO:0052546 cell wall pectin metabolic process | BP | 5.418e-02 | AT3G02880 AT1G64190 ATNRT1 |
GO:0048441 petal development | BP | 5.658e-02 | IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin |
GO:0048465 corolla development | BP | 5.658e-02 | IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin |
GO:0019748 secondary metabolic process | BP | 5.806e-02 | AT5G57480 FPS1 GRF3 LAC11 ATMEK1 BASS5 GATA15 OPCL1 CER6 ATGPX2 ATNRT1 FMO LAC6 LAC3 |
GO:0006779 porphyrin-containing compound biosynthet... | BP | 5.919e-02 | HEMC GSA1 PORB HEME1 CER6 |
GO:0044283 small molecule biosynthetic process | BP | 5.976e-02 | HEMC AtRGL3 AT5G35180 GSA1 FPS1 PAS2 KCS19 AT3G56580 PLAT1 KCS16 PORB ATMEK1 EOL1 CYP705A22 HEME1 JAL35 OPCL1 ATNAS4 CER6 GRX480 AT1G23450 ATWRKY60 APG10 ATNRT1 RCI3 ATKAO1 HMG2 ALD1 |
GO:0010025 wax biosynthetic process | BP | 6.042e-02 | CYP96A15 CER6 |
GO:0010166 wax metabolic process | BP | 6.042e-02 | CYP96A15 CER6 |
GO:0009163 nucleoside biosynthetic process | BP | 6.050e-02 | AtNUDT11 ACA11 emb2448 AT1G51650 |
GO:0042455 ribonucleoside biosynthetic process | BP | 6.050e-02 | AtNUDT11 ACA11 emb2448 AT1G51650 |
GO:0033014 tetrapyrrole biosynthetic process | BP | 6.186e-02 | HEMC GSA1 PORB HEME1 CER6 |
GO:0016114 terpenoid biosynthetic process | BP | 6.394e-02 | AtRGL3 FPS1 IM CER6 AT1G23450 ATKAO1 HMG2 |
GO:0009266 response to temperature stimulus | BP | 6.524e-02 | HEMC HAI1 KCS19 ATMEK1 ABCB2 IM HAP6 emb2448 AT3G27210 RCI2B BGLU23 JAL35 CER6 ATRAB-A2B GRX480 RCI3 ANNAT4 |
GO:0010243 response to organonitrogen compound | BP | 6.592e-02 | AT5G09800 BRH1 ATMEK1 ATPUB29 AT3G02880 OPCL1 ATWRKY60 AT1G23030 |
GO:0042742 defense response to bacterium | BP | 6.818e-02 | HEMC ACA11 ATMEK1 emb2448 CER6 GRX480 TGA7 ATWRKY60 ALD1 |
GO:0071554 cell wall organization or biogenesis | BP | 6.996e-02 | AT5G36260 EXT13 ATEXO70C2 PAS2 CASP4 LAC11 PME35 ADPG1 AT3G52580 AT4G39130 emb2448 EOL1 AT3G02480 AT3G02880 CASP2 AT3G16370 CER6 ANAC007 AT1G11590 AT1G64190 CASP1 ATNRT1 |
GO:0007167 enzyme linked receptor protein signaling... | BP | 7.323e-02 | IMK3 IMK2 AT4G34220 AT3G02880 RKL1 |
GO:0007169 transmembrane receptor protein tyrosine ... | BP | 7.323e-02 | IMK3 IMK2 AT4G34220 AT3G02880 RKL1 |
GO:0015994 chlorophyll metabolic process | BP | 7.323e-02 | HEMC GSA1 AT3G57680 PORB CER6 |
GO:0006270 DNA replication initiation | BP | 7.441e-02 | SNI1 ATMSH6 POLD3 AtHaspin |
GO:0044763 single-organism cellular process | BP | 7.513e-02 | ATMSH3 AT4G17000 HEMC NAPRT1 ATCHX12 AtRGL3 AT5G36260 EXT13 AT5G35180 CYP94B1 GSA1 HAI1 AT5G59240 AT5G58510 AT5G57480 FPS1 AtNUDT11 AT5G41550 GRF3 AT5G23820 AT5G18800 ATORC3 ATMIXTA ATEXO70C2 PAS2 ILP1 CASP4 KCS19 LAC11 BRH1 MAP65-4 AT3G57680 AT3G58060 ADPG1 ACA11 AT3G56580 IMK3 AT3G54930 IMK2 BIR6 PLAT1 AT4G39130 ATPLC1 AT4G34220 KCS16 AT4G31360 PORB ATMEK1 ABCB2 AT4G24350 IM HAP6 SNI1 UND BASS5 emb2448 EOL1 ATMSH6 ATT1 14-3-3EPSILON AT1G19200 AT1G51650 AT3G12100 AT3G02360 ABCG15 AT3G27210 HEME1 PMP ARP2 SULTR3;4 AFB2 AT3G02480 GATA15 AT3G02880 CASP2 AT3G16370 JAL35 OPCL1 ATNAS4 AtLPLAT2 AT1G72250 CER6 TTL1 ATRAB-A2B RKL1 GRX480 AtRLP4 AT1G71870 ADF11 NQR AT1G18340 AT1G33670 TGA7 PCR11 CYCT1;3 AT1G64190 AT1G23450 EMB1968 AT1G65010 POLD3 CASP1 ATGPX2 ATWRKY60 CPC APG10 ABS2 ATNRT1 AtHaspin RCI3 ATKAO1 HMG2 FMO AT2G02050 LAC6 ALD1 AtRLP21 AT2G13150 UCC1 AtCLE6 AT2G19780 LAC3 ARSK1 BGLU15 MEE25 AtMYB88 AGK1 |
GO:0006631 fatty acid metabolic process | BP | 7.613e-02 | PAS2 KCS19 KCS16 ATT1 ABCG15 AT3G16370 CER6 AT1G71870 NQR ABS2 |
GO:0009628 response to abiotic stimulus | BP | 7.633e-02 | FBH3 ATSK42 HEMC AtRGL3 GSA1 HAI1 FPS1 ATMIXTA PAS2 KCS19 AT3G56580 AT4G39130 KCS16 ATMEK1 ABCB2 IM HAP6 SNI1 emb2448 ATMSH6 AT3G02360 AT5MAT ABCG15 CYP705A22 AT3G27210 PMP ARP2 AT3G02480 AT3G08660 RCI2B BGLU23 AT3G16370 JAL35 CER6 TTL1 ATRAB-A2B GRX480 AT1G64190 ABS2 ATNRT1 RCI3 ANNAT4 |
GO:0072330 monocarboxylic acid biosynthetic process | BP | 7.663e-02 | HEMC PAS2 KCS19 PLAT1 KCS16 ATMEK1 HEME1 OPCL1 ATNAS4 CER6 GRX480 AT1G23450 ATWRKY60 |
GO:0009415 response to water | BP | 7.752e-02 | HAI1 AT3G56580 AT4G39130 ATMEK1 AT3G02480 GRX480 ATNRT1 RCI3 ANNAT4 |
GO:0009695 jasmonic acid biosynthetic process | BP | 7.812e-02 | PLAT1 OPCL1 CER6 GRX480 |
GO:0051188 cofactor biosynthetic process | BP | 8.196e-02 | HEMC NAPRT1 GSA1 AtNUDT11 PORB HEME1 CER6 |
GO:0010393 galacturonan metabolic process | BP | 8.206e-02 | AT3G02880 AT1G64190 ATNRT1 |
GO:0045488 pectin metabolic process | BP | 8.206e-02 | AT3G02880 AT1G64190 ATNRT1 |
GO:0051187 cofactor catabolic process | BP | 8.356e-02 | AtNUDT11 AT3G57680 |
GO:0006721 terpenoid metabolic process | BP | 8.440e-02 | AtRGL3 FPS1 IM CER6 AT1G23450 ATKAO1 HMG2 |
GO:0009856 pollination | BP | 8.458e-02 | AT5G36260 ATEXO70C2 ADPG1 AT4G39130 AT3G05000 ATNAS4 ATCAL5 MEE25 |
GO:0044706 multi-multicellular organism process | BP | 8.458e-02 | AT5G36260 ATEXO70C2 ADPG1 AT4G39130 AT3G05000 ATNAS4 ATCAL5 MEE25 |
GO:0048868 pollen tube development | BP | 8.688e-02 | AT5G36260 ATEXO70C2 ADPG1 AT4G39130 AT3G05000 ATNAS4 MEE25 |
GO:0006754 ATP biosynthetic process | BP | 8.721e-02 | ACA11 emb2448 AT1G51650 |
GO:0009073 aromatic amino acid family biosynthetic ... | BP | 8.721e-02 | HEMC GSA1 PORB |