4.0:Analysis result:Information of module
phyB Rc50

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0009150
purine ribonucleotide metabolic process
BP3.699e-03AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050
GO:0006163
purine nucleotide metabolic process
BP4.043e-03AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050 AGK1
GO:0046271
phenylpropanoid catabolic process
BP4.541e-03LAC11 LAC6 LAC3
GO:0046274
lignin catabolic process
BP4.541e-03LAC11 LAC6 LAC3
GO:0009116
nucleoside metabolic process
BP4.591e-03AtNUDT11 AT5G18800 ACA11 AT4G24350 emb2448 AT1G51650 HMG2 AT2G02050
GO:0071555
cell wall organization
BP4.908e-03AT5G36260 EXT13 ATEXO70C2 PAS2 CASP4 PME35 ADPG1 AT3G52580 AT4G39130 EOL1 AT3G02480 AT3G02880 CASP2 AT3G16370 CER6 AT1G11590 AT1G64190 CASP1 ATNRT1
GO:0042278
purine nucleoside metabolic process
BP5.699e-03AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050
GO:0046128
purine ribonucleoside metabolic process
BP5.699e-03AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050
GO:0009119
ribonucleoside metabolic process
BP8.947e-03AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050
GO:0045229
external encapsulating structure organiz...
BP8.982e-03AT5G36260 EXT13 ATEXO70C2 PAS2 CASP4 PME35 ADPG1 AT3G52580 AT4G39130 EOL1 AT3G02480 AT3G02880 CASP2 AT3G16370 CER6 AT1G11590 AT1G64190 CASP1 ATNRT1
GO:0072521
purine-containing compound metabolic pro...
BP9.166e-03AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 HMG2 AT2G02050 AGK1
GO:0042545
cell wall modification
BP1.066e-02AT5G36260 ATEXO70C2 CASP4 PME35 ADPG1 AT3G52580 AT4G39130 EOL1 AT3G02480 CASP2 AT1G11590 CASP1
GO:1901657
glycosyl compound metabolic process
BP1.104e-02AtNUDT11 AT5G18800 ACA11 ATMEK1 AT4G24350 BASS5 emb2448 AT1G51650 ATNRT1 HMG2 FMO AT2G02050
GO:0000038
very long-chain fatty acid metabolic pro...
BP1.270e-02PAS2 KCS16 AT3G16370 CER6
GO:0009694
jasmonic acid metabolic process
BP1.286e-02AtRGL3 CYP94B1 PLAT1 OPCL1 CER6 GRX480
GO:0052541
plant-type cell wall cellulose metabolic...
BP1.366e-02AT3G02880 AT1G64190 ATNRT1
GO:0048447
sepal morphogenesis
BP1.839e-02IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin
GO:0048451
petal formation
BP1.839e-02IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin
GO:0048453
sepal formation
BP1.839e-02IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin
GO:0009410
response to xenobiotic stimulus
BP1.860e-02ATMSH3 GRX480 TGA7 AT2G13150
GO:0009409
response to cold
BP2.227e-02HEMC HAI1 KCS19 ATMEK1 ABCB2 HAP6 emb2448 RCI2B BGLU23 JAL35 CER6 GRX480 RCI3 ANNAT4
GO:0048442
sepal development
BP2.249e-02IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin
GO:0048464
flower calyx development
BP2.249e-02IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin
GO:0055086
nucleobase-containing small molecule met...
BP2.467e-02HEMC NAPRT1 AT5G59240 AtNUDT11 AT5G18800 ACA11 AT4G24350 emb2448 AT1G51650 AT3G02360 CER6 AT1G64190 EMB1968 HMG2 AT2G02050 MEE25 AGK1
GO:0009117
nucleotide metabolic process
BP2.507e-02HEMC NAPRT1 AT5G59240 AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 AT3G02360 CER6 AT1G64190 EMB1968 HMG2 AT2G02050 MEE25 AGK1
GO:0046034
ATP metabolic process
BP2.552e-02AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050
GO:0006753
nucleoside phosphate metabolic process
BP2.567e-02HEMC NAPRT1 AT5G59240 AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 AT3G02360 CER6 AT1G64190 EMB1968 HMG2 AT2G02050 MEE25 AGK1
GO:0048446
petal morphogenesis
BP2.713e-02IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin
GO:0009830
cell wall modification involved in absci...
BP2.828e-02ADPG1 AT3G02480
GO:0044277
cell wall disassembly
BP2.828e-02ADPG1 AT3G02480
GO:0009144
purine nucleoside triphosphate metabolic...
BP3.055e-02AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050
GO:0009199
ribonucleoside triphosphate metabolic pr...
BP3.055e-02AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050
GO:0009205
purine ribonucleoside triphosphate metab...
BP3.055e-02AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050
GO:0030154
cell differentiation
BP3.092e-02HEMC AT5G36260 EXT13 GSA1 ATEXO70C2 PAS2 ADPG1 IMK3 BIR6 AT4G39130 PORB ARP2 AT3G02880 AT3G16370 ATNAS4 CER6 ADF11 PCR11 CPC RCI3 UCC1 ARSK1 AtMYB88
GO:0009753
response to jasmonic acid
BP3.403e-02AtRGL3 CYP94B1 HAI1 ATMIXTA ATMEK1 BASS5 JAL35 OPCL1 GRX480 ATWRKY60 CPC
GO:0044281
small molecule metabolic process
BP3.415e-02HEMC NAPRT1 AtRGL3 AT5G35180 CYP94B1 GSA1 AT5G59240 FPS1 AtNUDT11 AT5G23820 AT5G18800 PAS2 KCS19 ACA11 AT3G56580 PLAT1 KCS16 PORB ATMEK1 AT4G24350 BASS5 emb2448 EOL1 ATT1 AT1G51650 AT3G02360 ABCG15 CYP705A22 HEME1 AT3G16370 JAL35 OPCL1 ATNAS4 CER6 GRX480 AT1G71870 NQR AT1G64190 AT1G23450 EMB1968 ATWRKY60 APG10 ABS2 ATNRT1 RCI3 ATKAO1 HMG2 FMO AT2G02050 ALD1 MEE25 AGK1
GO:0009141
nucleoside triphosphate metabolic proces...
BP3.422e-02AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050
GO:0009611
response to wounding
BP3.456e-02CYP94B1 HAI1 PLAT1 ATMEK1 AT4G24350 BASS5 JAL35 OPCL1 GRX480
GO:0009126
purine nucleoside monophosphate metaboli...
BP3.616e-02AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050
GO:0009167
purine ribonucleoside monophosphate meta...
BP3.616e-02AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050
GO:0050896
response to stimulus
BP3.681e-02ATMSH3 AT4G17720 FBH3 ATSK42 HEMC AtRGL3 AT5G35180 CYP94B1 GSA1 HAI1 AT5G57480 FPS1 AT5G41550 ATORC3 AT5G15180 ATMIXTA PAS2 AT5G09800 KCS19 BRH1 AT3G60540 AT3G57680 ACA11 AT3G56580 IMK3 AT3G54930 AT3G53250 IMK2 PLAT1 AT4G39130 ATPLC1 AT4G34220 KCS16 PORB ATMEK1 ABCB2 AT4G24350 IM HAP6 SNI1 BASS5 emb2448 EOL1 ATMSH6 14-3-3EPSILON AT1G19200 AT3G12100 AT3G02360 AT5MAT ABCG15 CYP705A22 AT3G27210 HEME1 PMP ATPUB29 ARP2 AFB2 AT3G02480 AT3G02880 AT3G08660 RCI2B BGLU23 AT3G05000 AT3G16370 JAL35 OPCL1 MLP165 CER6 TTL1 ATRAB-A2B RKL1 GRX480 AtRLP4 AT1G71870 AT1G71695 NQR AT1G18340 AT1G33670 TGA7 AT1G64190 POLD3 ATGPX2 ATWRKY60 CPC ABS2 ATNRT1 RCI3 AT1G23030 AT2G02050 ALD1 AtRLP21 AT2G13150 AT2G15010 ANNAT4 AtCLE6 GH3.1 AT2G19780
GO:0009259
ribonucleotide metabolic process
BP3.691e-02AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 EMB1968 HMG2 AT2G02050
GO:0016053
organic acid biosynthetic process
BP3.859e-02HEMC AtRGL3 AT5G35180 GSA1 PAS2 KCS19 AT3G56580 PLAT1 KCS16 PORB ATMEK1 EOL1 HEME1 JAL35 OPCL1 ATNAS4 CER6 GRX480 AT1G23450 ATWRKY60 APG10 ATKAO1 ALD1
GO:0046394
carboxylic acid biosynthetic process
BP3.859e-02HEMC AtRGL3 AT5G35180 GSA1 PAS2 KCS19 AT3G56580 PLAT1 KCS16 PORB ATMEK1 EOL1 HEME1 JAL35 OPCL1 ATNAS4 CER6 GRX480 AT1G23450 ATWRKY60 APG10 ATKAO1 ALD1
GO:0009664
plant-type cell wall organization
BP3.912e-02AT5G36260 EXT13 ATEXO70C2 ADPG1 AT3G52580 AT4G39130 AT3G02480 AT3G02880 AT3G16370 AT1G64190 ATNRT1
GO:0009161
ribonucleoside monophosphate metabolic p...
BP4.022e-02AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050
GO:1901659
glycosyl compound biosynthetic process
BP4.100e-02AtNUDT11 ACA11 ATMEK1 BASS5 emb2448 AT1G51650 ATNRT1 FMO
GO:0009069
serine family amino acid metabolic proce...
BP4.190e-02HEMC AT5G35180 GSA1 AT5G23820 PAS2 PORB EOL1 JAL35 CER6
GO:0009123
nucleoside monophosphate metabolic proce...
BP4.456e-02AT5G18800 ACA11 emb2448 AT1G51650 AT2G02050
GO:0009152
purine ribonucleotide biosynthetic proce...
BP4.527e-02AtNUDT11 ACA11 emb2448 AT1G51650
GO:0048444
floral organ morphogenesis
BP4.538e-02AtRGL3 IMK3 SNI1 ATMSH6 AT1G72250 ATVAMP726 EMB1968 AtHaspin
GO:0048563
post-embryonic organ morphogenesis
BP4.538e-02AtRGL3 IMK3 SNI1 ATMSH6 AT1G72250 ATVAMP726 EMB1968 AtHaspin
GO:0048449
floral organ formation
BP4.684e-02IMK3 SNI1 ATMSH6 AT1G72250 ATVAMP726 EMB1968 AtHaspin
GO:1901564
organonitrogen compound metabolic proces...
BP4.782e-02HEMC NAPRT1 AT5G35180 GSA1 FPS1 AtNUDT11 AT5G23820 AT5G18800 PAS2 AT3G57680 ACA11 AT3G56580 PORB AT4G24350 emb2448 EOL1 AT1G51650 AT3G02360 HEME1 AT3G15710 JAL35 ATNAS4 CER6 AT1G64190 AT1G34640 EMB1968 APG10 HMG2 AT2G02050 ALD1 AGK1
GO:0034220
ion transmembrane transport
BP4.857e-02ATCHX12 ACA11 BASS5 emb2448 AT1G51650 AT3G02360 BGLU15
GO:0006816
calcium ion transport
BP4.916e-02FPS1 ACA11 emb2448 PMP JAL35
GO:0019693
ribose phosphate metabolic process
BP4.958e-02HEMC AtNUDT11 AT5G18800 ACA11 emb2448 AT1G51650 AT3G02360 AT1G64190 EMB1968 HMG2 AT2G02050
GO:0006778
porphyrin-containing compound metabolic ...
BP5.098e-02HEMC GSA1 AT3G57680 PORB HEME1 CER6
GO:0033013
tetrapyrrole metabolic process
BP5.098e-02HEMC GSA1 AT3G57680 PORB HEME1 CER6
GO:0010200
response to chitin
BP5.168e-02AT5G09800 BRH1 ATMEK1 ATPUB29 AT3G02880 OPCL1 ATWRKY60 AT1G23030
GO:0006518
peptide metabolic process
BP5.329e-02AT3G15710 AT1G34640
GO:0042775
mitochondrial ATP synthesis coupled elec...
BP5.329e-02AT5G18800 AT2G02050
GO:0042451
purine nucleoside biosynthetic process
BP5.412e-02AtNUDT11 ACA11 emb2448 AT1G51650
GO:0046129
purine ribonucleoside biosynthetic proce...
BP5.412e-02AtNUDT11 ACA11 emb2448 AT1G51650
GO:0052546
cell wall pectin metabolic process
BP5.418e-02AT3G02880 AT1G64190 ATNRT1
GO:0048441
petal development
BP5.658e-02IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin
GO:0048465
corolla development
BP5.658e-02IMK3 ATMSH6 AT1G72250 ATVAMP726 AtHaspin
GO:0019748
secondary metabolic process
BP5.806e-02AT5G57480 FPS1 GRF3 LAC11 ATMEK1 BASS5 GATA15 OPCL1 CER6 ATGPX2 ATNRT1 FMO LAC6 LAC3
GO:0006779
porphyrin-containing compound biosynthet...
BP5.919e-02HEMC GSA1 PORB HEME1 CER6
GO:0044283
small molecule biosynthetic process
BP5.976e-02HEMC AtRGL3 AT5G35180 GSA1 FPS1 PAS2 KCS19 AT3G56580 PLAT1 KCS16 PORB ATMEK1 EOL1 CYP705A22 HEME1 JAL35 OPCL1 ATNAS4 CER6 GRX480 AT1G23450 ATWRKY60 APG10 ATNRT1 RCI3 ATKAO1 HMG2 ALD1
GO:0010025
wax biosynthetic process
BP6.042e-02CYP96A15 CER6
GO:0010166
wax metabolic process
BP6.042e-02CYP96A15 CER6
GO:0009163
nucleoside biosynthetic process
BP6.050e-02AtNUDT11 ACA11 emb2448 AT1G51650
GO:0042455
ribonucleoside biosynthetic process
BP6.050e-02AtNUDT11 ACA11 emb2448 AT1G51650
GO:0033014
tetrapyrrole biosynthetic process
BP6.186e-02HEMC GSA1 PORB HEME1 CER6
GO:0016114
terpenoid biosynthetic process
BP6.394e-02AtRGL3 FPS1 IM CER6 AT1G23450 ATKAO1 HMG2
GO:0009266
response to temperature stimulus
BP6.524e-02HEMC HAI1 KCS19 ATMEK1 ABCB2 IM HAP6 emb2448 AT3G27210 RCI2B BGLU23 JAL35 CER6 ATRAB-A2B GRX480 RCI3 ANNAT4
GO:0010243
response to organonitrogen compound
BP6.592e-02AT5G09800 BRH1 ATMEK1 ATPUB29 AT3G02880 OPCL1 ATWRKY60 AT1G23030
GO:0042742
defense response to bacterium
BP6.818e-02HEMC ACA11 ATMEK1 emb2448 CER6 GRX480 TGA7 ATWRKY60 ALD1
GO:0071554
cell wall organization or biogenesis
BP6.996e-02AT5G36260 EXT13 ATEXO70C2 PAS2 CASP4 LAC11 PME35 ADPG1 AT3G52580 AT4G39130 emb2448 EOL1 AT3G02480 AT3G02880 CASP2 AT3G16370 CER6 ANAC007 AT1G11590 AT1G64190 CASP1 ATNRT1
GO:0007167
enzyme linked receptor protein signaling...
BP7.323e-02IMK3 IMK2 AT4G34220 AT3G02880 RKL1
GO:0007169
transmembrane receptor protein tyrosine ...
BP7.323e-02IMK3 IMK2 AT4G34220 AT3G02880 RKL1
GO:0015994
chlorophyll metabolic process
BP7.323e-02HEMC GSA1 AT3G57680 PORB CER6
GO:0006270
DNA replication initiation
BP7.441e-02SNI1 ATMSH6 POLD3 AtHaspin
GO:0044763
single-organism cellular process
BP7.513e-02ATMSH3 AT4G17000 HEMC NAPRT1 ATCHX12 AtRGL3 AT5G36260 EXT13 AT5G35180 CYP94B1 GSA1 HAI1 AT5G59240 AT5G58510 AT5G57480 FPS1 AtNUDT11 AT5G41550 GRF3 AT5G23820 AT5G18800 ATORC3 ATMIXTA ATEXO70C2 PAS2 ILP1 CASP4 KCS19 LAC11 BRH1 MAP65-4 AT3G57680 AT3G58060 ADPG1 ACA11 AT3G56580 IMK3 AT3G54930 IMK2 BIR6 PLAT1 AT4G39130 ATPLC1 AT4G34220 KCS16 AT4G31360 PORB ATMEK1 ABCB2 AT4G24350 IM HAP6 SNI1 UND BASS5 emb2448 EOL1 ATMSH6 ATT1 14-3-3EPSILON AT1G19200 AT1G51650 AT3G12100 AT3G02360 ABCG15 AT3G27210 HEME1 PMP ARP2 SULTR3;4 AFB2 AT3G02480 GATA15 AT3G02880 CASP2 AT3G16370 JAL35 OPCL1 ATNAS4 AtLPLAT2 AT1G72250 CER6 TTL1 ATRAB-A2B RKL1 GRX480 AtRLP4 AT1G71870 ADF11 NQR AT1G18340 AT1G33670 TGA7 PCR11 CYCT1;3 AT1G64190 AT1G23450 EMB1968 AT1G65010 POLD3 CASP1 ATGPX2 ATWRKY60 CPC APG10 ABS2 ATNRT1 AtHaspin RCI3 ATKAO1 HMG2 FMO AT2G02050 LAC6 ALD1 AtRLP21 AT2G13150 UCC1 AtCLE6 AT2G19780 LAC3 ARSK1 BGLU15 MEE25 AtMYB88 AGK1
GO:0006631
fatty acid metabolic process
BP7.613e-02PAS2 KCS19 KCS16 ATT1 ABCG15 AT3G16370 CER6 AT1G71870 NQR ABS2
GO:0009628
response to abiotic stimulus
BP7.633e-02FBH3 ATSK42 HEMC AtRGL3 GSA1 HAI1 FPS1 ATMIXTA PAS2 KCS19 AT3G56580 AT4G39130 KCS16 ATMEK1 ABCB2 IM HAP6 SNI1 emb2448 ATMSH6 AT3G02360 AT5MAT ABCG15 CYP705A22 AT3G27210 PMP ARP2 AT3G02480 AT3G08660 RCI2B BGLU23 AT3G16370 JAL35 CER6 TTL1 ATRAB-A2B GRX480 AT1G64190 ABS2 ATNRT1 RCI3 ANNAT4
GO:0072330
monocarboxylic acid biosynthetic process
BP7.663e-02HEMC PAS2 KCS19 PLAT1 KCS16 ATMEK1 HEME1 OPCL1 ATNAS4 CER6 GRX480 AT1G23450 ATWRKY60
GO:0009415
response to water
BP7.752e-02HAI1 AT3G56580 AT4G39130 ATMEK1 AT3G02480 GRX480 ATNRT1 RCI3 ANNAT4
GO:0009695
jasmonic acid biosynthetic process
BP7.812e-02PLAT1 OPCL1 CER6 GRX480
GO:0051188
cofactor biosynthetic process
BP8.196e-02HEMC NAPRT1 GSA1 AtNUDT11 PORB HEME1 CER6
GO:0010393
galacturonan metabolic process
BP8.206e-02AT3G02880 AT1G64190 ATNRT1
GO:0045488
pectin metabolic process
BP8.206e-02AT3G02880 AT1G64190 ATNRT1
GO:0051187
cofactor catabolic process
BP8.356e-02AtNUDT11 AT3G57680
GO:0006721
terpenoid metabolic process
BP8.440e-02AtRGL3 FPS1 IM CER6 AT1G23450 ATKAO1 HMG2
GO:0009856
pollination
BP8.458e-02AT5G36260 ATEXO70C2 ADPG1 AT4G39130 AT3G05000 ATNAS4 ATCAL5 MEE25
GO:0044706
multi-multicellular organism process
BP8.458e-02AT5G36260 ATEXO70C2 ADPG1 AT4G39130 AT3G05000 ATNAS4 ATCAL5 MEE25
GO:0048868
pollen tube development
BP8.688e-02AT5G36260 ATEXO70C2 ADPG1 AT4G39130 AT3G05000 ATNAS4 MEE25
GO:0006754
ATP biosynthetic process
BP8.721e-02ACA11 emb2448 AT1G51650
GO:0009073
aromatic amino acid family biosynthetic ...
BP8.721e-02HEMC GSA1 PORB