4.0:Analysis result:Information of module
phyB Rc50

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0009608
response to symbiont
BP7.074e-03BGLU10 AT4G19010 AT1G33110 AT1G72900
GO:0009610
response to symbiotic fungus
BP7.074e-03BGLU10 AT4G19010 AT1G33110 AT1G72900
GO:0000375
RNA splicing, via transesterification re...
BP9.406e-03AT5G61880 AT3G46210 NUZ AtELP2 GRP23 ATCAF1 HEN2
GO:0000377
RNA splicing, via transesterification re...
BP9.406e-03AT5G61880 AT3G46210 NUZ AtELP2 GRP23 ATCAF1 HEN2
GO:0046165
alcohol biosynthetic process
BP9.952e-03CES ATSYTC LBD39 ATNCED5 AOAT2 NIP6 ATGPX4 AT2G18770 AT2G34310 AT2G34460
GO:0017038
protein import
BP1.031e-02APP1 AT3G59020 EDA7 ATXI-I AT3G06480 AML5 AT1G71480 ATPEX2 AtELP2 AtXRN3 ATNAF1 AT2G25970
GO:0051276
chromosome organization
BP1.127e-02ATFBR1 AT5G18770 AT5G05420 SUVH1 AT3G51120 AtMORC1 SRFR1 FAB1A PHYE ATMLH1 AT1G04880 AtELP2 EMB30 AtXRN3 CHR5 AT2G36480 AT2G13720 HEN2
GO:0006913
nucleocytoplasmic transport
BP1.354e-02AtRABH1a AT3G59020 EDA7 ATXI-I AT1G71480 AtELP2 ACD ATNAF1 AT2G25970
GO:0051169
nuclear transport
BP1.354e-02AtRABH1a AT3G59020 EDA7 ATXI-I AT1G71480 AtELP2 ACD ATNAF1 AT2G25970
GO:0040029
regulation of gene expression, epigeneti...
BP1.403e-02AT5G66970 SUVH1 AtMORC1 SRFR1 PHYE ATMLH1 NUZ AtELP2 AtXRN3 AT2G36480 HEN2
GO:0000398
mRNA splicing, via spliceosome
BP1.833e-02AT5G61880 AT3G46210 NUZ AtELP2 GRP23 HEN2
GO:0060918
auxin transport
BP2.008e-02APP1 ABCB21 EMB30 SRD2
GO:0033043
regulation of organelle organization
BP2.033e-02AT5G18770 AtMORC1 FAB1A AML5 EMB30 AtXRN3 AT2G36480 HEN2
GO:0033044
regulation of chromosome organization
BP2.079e-02AT5G18770 AtMORC1 FAB1A EMB30 AtXRN3 AT2G36480
GO:0009914
hormone transport
BP2.207e-02APP1 ABCB21 EMB30 SRD2
GO:1901617
organic hydroxy compound biosynthetic pr...
BP2.660e-02CES ATSYTC TAT7 AT5G24210 AT3G48080 LBD39 AtTT8 ATNCED5 AOAT2 NIP6 ATGPX4 AT2G18770 AT2G34310 AT2G34460
GO:0016568
chromatin modification
BP2.700e-02ATFBR1 AT5G05420 SUVH1 AT3G51120 AtMORC1 SRFR1 PHYE ATMLH1 AtELP2 HEN2
GO:0006606
protein import into nucleus
BP2.786e-02AT3G59020 EDA7 ATXI-I AT1G71480 AtELP2 ATNAF1 AT2G25970
GO:0034504
protein localization to nucleus
BP2.786e-02AT3G59020 EDA7 ATXI-I AT1G71480 AtELP2 ATNAF1 AT2G25970
GO:0044744
protein targeting to nucleus
BP2.786e-02AT3G59020 EDA7 ATXI-I AT1G71480 AtELP2 ATNAF1 AT2G25970
GO:1902593
single-organism nuclear import
BP2.786e-02AT3G59020 EDA7 ATXI-I AT1G71480 AtELP2 ATNAF1 AT2G25970
GO:0006891
intra-Golgi vesicle-mediated transport
BP2.874e-02APP1 AtRABH1a AT5G39630 ATPEX2
GO:0046283
anthocyanin-containing compound metaboli...
BP2.874e-02ARR2 AT3G53960 BGLU10 AtTT8
GO:0051170
nuclear import
BP3.066e-02AT3G59020 EDA7 ATXI-I AT1G71480 AtELP2 ATNAF1 AT2G25970
GO:0006325
chromatin organization
BP3.256e-02ATFBR1 AT5G05420 SUVH1 AT3G51120 AtMORC1 SRFR1 PHYE ATMLH1 AT1G04880 AtELP2 CHR5 HEN2
GO:0009407
toxin catabolic process
BP3.589e-02AER AT5G27920 Phox4 AT3G04000 ATGSTU12 ATGPX4 ATGSTU16 AT2G36950
GO:0090487
secondary metabolite catabolic process
BP3.589e-02AER AT5G27920 Phox4 AT3G04000 ATGSTU12 ATGPX4 ATGSTU16 AT2G36950
GO:0016106
sesquiterpenoid biosynthetic process
BP3.786e-02ATNCED5 ATGPX4 AtD27
GO:0016458
gene silencing
BP3.959e-02AT5G66970 AtMORC1 SRFR1 PHYE ATMLH1 NUZ AtXRN3 AT2G36480 HEN2
GO:0010105
negative regulation of ethylene-activate...
BP4.135e-02EBF2 EIN4
GO:0070298
negative regulation of phosphorelay sign...
BP4.135e-02EBF2 EIN4
GO:0031047
gene silencing by RNA
BP4.197e-02AT5G66970 SRFR1 PHYE ATMLH1 NUZ AtXRN3 AT2G36480 HEN2
GO:0009968
negative regulation of signal transducti...
BP4.227e-02AIP2 EBF2 EIN4 AFP4
GO:0010648
negative regulation of cell communicatio...
BP4.227e-02AIP2 EBF2 EIN4 AFP4
GO:0023057
negative regulation of signaling
BP4.227e-02AIP2 EBF2 EIN4 AFP4
GO:0010264
myo-inositol hexakisphosphate biosynthet...
BP4.534e-02AOAT2 NIP6 AT2G34310 AT2G34460
GO:0032958
inositol phosphate biosynthetic process
BP4.534e-02AOAT2 NIP6 AT2G34310 AT2G34460
GO:0033517
myo-inositol hexakisphosphate metabolic ...
BP4.534e-02AOAT2 NIP6 AT2G34310 AT2G34460
GO:0010104
regulation of ethylene-activated signali...
BP4.865e-02EBF2 EIN4
GO:0070297
regulation of phosphorelay signal transd...
BP4.865e-02EBF2 EIN4
GO:0010638
positive regulation of organelle organiz...
BP5.040e-02FAB1A AML5 EMB30 AtXRN3 HEN2
GO:0009404
toxin metabolic process
BP5.047e-02AER AT5G27920 Phox4 AT3G04000 ATGSTU12 ATGPX4 ATGSTU16 AT2G36950
GO:0009798
axis specification
BP5.052e-02EMB30 SRD2 BOP2
GO:0072594
establishment of protein localization to...
BP5.512e-02APP1 AT5G66970 AT3G59020 EDA7 AT3G46210 ATXI-I AtVSR2 AT1G22200 AT3G06480 AML5 AT1G71480 ATPEX2 AtELP2 AtXRN3 ATNAF1 AT2G25970
GO:0016558
protein import into peroxisome matrix
BP5.593e-02APP1 AT3G06480 AML5 ATPEX2 AtXRN3
GO:0051130
positive regulation of cellular componen...
BP5.593e-02FAB1A AML5 EMB30 AtXRN3 HEN2
GO:0033365
protein localization to organelle
BP5.630e-02APP1 AT5G66970 AT3G59020 EDA7 AT3G46210 ATXI-I AtVSR2 AT1G22200 AT3G06480 AML5 AT1G71480 ATPEX2 AtELP2 AtXRN3 ATNAF1 AT2G25970
GO:0010675
regulation of cellular carbohydrate meta...
BP5.638e-02AFP4 AT2G25450
GO:0043255
regulation of carbohydrate biosynthetic ...
BP5.638e-02AFP4 AT2G25450
GO:0006625
protein targeting to peroxisome
BP5.882e-02APP1 AT3G06480 AML5 ATPEX2 AtXRN3
GO:0043574
peroxisomal transport
BP5.882e-02APP1 AT3G06480 AML5 ATPEX2 AtXRN3
GO:0072662
protein localization to peroxisome
BP5.882e-02APP1 AT3G06480 AML5 ATPEX2 AtXRN3
GO:0072663
establishment of protein localization to...
BP5.882e-02APP1 AT3G06480 AML5 ATPEX2 AtXRN3
GO:0008033
tRNA processing
BP5.996e-02ATFBR1 TRZ3 NUZ
GO:0048646
anatomical structure formation involved ...
BP6.230e-02AT5G13380 BCD1 EMB30 SRD2 AtD27 BOP2 HEN2
GO:0007126
meiotic nuclear division
BP6.330e-02AT5G18770 ATMLH1 AML5 AtXRN3 AT2G36480 RECA1
GO:0008380
RNA splicing
BP6.843e-02AT5G61880 AT3G46210 SR45a NUZ AtELP2 AT1G03280 GRP23 ATCAF1 HEN2
GO:0006066
alcohol metabolic process
BP6.940e-02CES ATSYTC LBD39 ATNCED5 AOAT2 NIP6 ATGPX4 AT2G18770 AT2G34310 AT2G34460
GO:0016482
cytoplasmic transport
BP6.979e-02APP1 AT5G66970 AtRABH1a AT3G59020 EDA7 AT3G46210 ATXI-I AtVSR2 AT1G22200 AT3G06480 AML5 AT1G71480 ATPEX2 AtELP2 ACD AtXRN3 ATNAF1 AT2G25970
GO:0006714
sesquiterpenoid metabolic process
BP7.016e-02ATNCED5 ATGPX4 AtD27
GO:0009926
auxin polar transport
BP7.016e-02APP1 EMB30 SRD2
GO:0046482
para-aminobenzoic acid metabolic process
BP7.016e-02AT3G04000 ATSAGT1 AT2G36950
GO:0046173
polyol biosynthetic process
BP7.019e-02AOAT2 NIP6 AT2G34310 AT2G34460
GO:0001522
pseudouridine synthesis
BP7.299e-02AT1G34150 ATNAF1
GO:0009954
proximal/distal pattern formation
BP7.299e-02ATPOB1 BOP2
GO:0051645
Golgi localization
BP7.299e-02ATPLC ATXI-I
GO:0051646
mitochondrion localization
BP7.299e-02ATPLC ATXI-I
GO:0060151
peroxisome localization
BP7.299e-02ATPLC ATXI-I
GO:0006855
drug transmembrane transport
BP7.553e-02AT5G19700 BCD1 AT1G33110
GO:0010118
stomatal movement
BP7.553e-02ARR2 PIP5K4 HT1
GO:0010224
response to UV-B
BP7.835e-02AT3G43110 AtTT8 AT3G24190 UGT73C1
GO:0016569
covalent chromatin modification
BP7.989e-02ATFBR1 AT5G05420 SUVH1 AT3G51120 SRFR1 PHYE AtELP2 HEN2
GO:0034660
ncRNA metabolic process
BP8.054e-02ATFBR1 AT5G50110 AtXRN2 AT4G34730 TRZ3 NUZ ACD SRD2 AtXRN3 ATNAF1 ATCAF1
GO:0015893
drug transport
BP8.108e-02AT5G19700 BCD1 AT1G33110
GO:0042493
response to drug
BP8.108e-02AT5G19700 BCD1 AT1G33110
GO:0051128
regulation of cellular component organiz...
BP8.112e-02AT5G18770 AtMORC1 FAB1A AML5 EMB30 AtXRN3 AT2G36480 AT1G60420 HEN2
GO:0009788
negative regulation of abscisic acid-act...
BP8.182e-02AIP2 AFP4
GO:0010119
regulation of stomatal movement
BP8.182e-02ARR2 HT1
GO:0071804
cellular potassium ion transport
BP8.182e-02AT5G14880 AT1G60160
GO:0071805
potassium ion transmembrane transport
BP8.182e-02AT5G14880 AT1G60160
GO:1901420
negative regulation of response to alcoh...
BP8.182e-02AIP2 AFP4
GO:0051604
protein maturation
BP8.680e-02AT3G46210 AtELP2 ACD
GO:0006399
tRNA metabolic process
BP8.860e-02ATFBR1 TRZ3 NUZ ACD ATCAF1
GO:0006397
mRNA processing
BP8.945e-02AT5G61880 AT3G46210 NUZ AtELP2 GRP23 HEN2
GO:0010311
lateral root formation
BP9.095e-02EMB30 SRD2
GO:0052542
defense response by callose deposition
BP9.268e-02ATWRKY67 AT3G16330 ATLOX4
GO:0009873
ethylene-activated signaling pathway
BP9.999e-02ARR2 EBF2 EIN4 ATLOX4 MAPKKK14
GO:0031123
RNA 3'-end processing
BP1.004e-01TRZ3 NUZ
GO:0006694
steroid biosynthetic process
BP1.007e-01CES ATSYTC LBD39 AT2G18770
GO:0051052
regulation of DNA metabolic process
BP1.007e-01ATMLH1 AtELP2 AtXRN3 AT2G36480
GO:0007062
sister chromatid cohesion
BP1.039e-01AT5G18770 ATMLH1 EMB30 AtXRN3 AT2G36480
GO:0010583
response to cyclopentenone
BP1.039e-01AER Phox4 AT3G04000 ATGSTU16 AT2G36950
GO:0043647
inositol phosphate metabolic process
BP1.055e-01AOAT2 NIP6 AT2G34310 AT2G34460
GO:1903046
meiotic cell cycle process
BP1.080e-01AT5G18770 ATMLH1 AtXRN3 AT2G36480 RECA1
GO:0007031
peroxisome organization
BP1.121e-01APP1 AT3G06480 AML5 ATPEX2 AtXRN3
GO:0009966
regulation of signal transduction
BP1.162e-01AIP2 EBF2 ABCB21 EIN4 AFP4
GO:0023051
regulation of signaling
BP1.162e-01AIP2 EBF2 ABCB21 EIN4 AFP4
GO:0044743
intracellular protein transmembrane impo...
BP1.162e-01APP1 AT3G06480 AML5 ATPEX2 AtXRN3
GO:0065002
intracellular protein transmembrane tran...
BP1.162e-01APP1 AT3G06480 AML5 ATPEX2 AtXRN3
GO:0071806
protein transmembrane transport
BP1.162e-01APP1 AT3G06480 AML5 ATPEX2 AtXRN3