GOID TERM ONTOLOGY pValue Genes GO:0071554 cell wall organization or biogenesis BP 0.000749830623881612 AT4G15980//AT5G27870//AT5G49180//ATTIP2;3//CESA4//AT5G23130//IQD11//IQD13//ATGSL11//LTPG2//AT3G43270//LSH9//MRH1//ATEXP8//AT3G16370//AT1G55260//AT1G72230//EMB71//AT1G69420//LEA7//AT1G47410//AT1G30690//TTL3//ATXTH17//PG2//AT1G04680//ATPMEPCRD//GEM1//ROPGAP3//AGD10//AT2G26730 GO:0009926 auxin polar transport BP 0.00276182991047182 CLEL//AT3G16370//PG2//AT1G04680//ROPGAP3//ABCB6//AT2G26730 GO:0060918 auxin transport BP 0.00305870765556714 CLEL//AT3G16370//PG2//AT1G04680//ROPGAP3//ABCB6//AT2G26730 GO:0042546 cell wall biogenesis BP 0.00330518573607804 ATTIP2;3//CESA4//IQD11//IQD13//LTPG2//LSH9//AT3G16370//AT1G55260//AT1G72230//AT1G69420//AT1G47410//TTL3//PG2//AT1G04680//GEM1//AT2G26730 GO:0009914 hormone transport BP 0.00337939393353892 CLEL//AT3G16370//PG2//AT1G04680//ROPGAP3//ABCB6//AT2G26730 GO:0071555 cell wall organization BP 0.00639572008368702 AT4G15980//AT5G27870//AT5G49180//ATGSL11//AT3G43270//MRH1//ATEXP8//AT3G16370//AT1G55260//EMB71//AT1G69420//LEA7//AT1G30690//PG2//AT1G04680//ATPMEPCRD//ROPGAP3//AGD10//AT2G26730 GO:0009832 plant-type cell wall biogenesis BP 0.00890931207809851 CESA4//AT3G16370//AT1G55260//AT1G69420//TTL3//PG2//AT1G04680//GEM1//AT2G26730 GO:0045229 external encapsulating structure organiz... BP 0.0116191827441843 AT4G15980//AT5G27870//AT5G49180//ATGSL11//AT3G43270//MRH1//ATEXP8//AT3G16370//AT1G55260//EMB71//AT1G69420//LEA7//AT1G30690//PG2//AT1G04680//ATPMEPCRD//ROPGAP3//AGD10//AT2G26730 GO:0006857 oligopeptide transport BP 0.0163063888638052 AT5G11570//ATOPT7//AT3G21670//AT1G72140//AT2G26690 GO:0015833 peptide transport BP 0.0163063888638052 AT5G11570//ATOPT7//AT3G21670//AT1G72140//AT2G26690 GO:0072503 cellular divalent inorganic cation homeo... BP 0.0187161952715649 VHA-A2//ATVPS45//ATGLR2.7 GO:0009624 response to nematode BP 0.0201796088145741 AT5G38030//AT1G72140//LAX2//ATVPS45 GO:0042538 hyperosmotic salinity response BP 0.022903605845118 ATHVA22E//AT3G20300//RCI2A//ATCDPK1//JAZ2//SLT1 GO:0042886 amide transport BP 0.0230430890318635 AT5G11570//ATOPT7//AT3G21670//AT1G72140//AT2G26690 GO:0072507 divalent inorganic cation homeostasis BP 0.029111691906789 VHA-A2//ATVPS45//ATGLR2.7 GO:0006694 steroid biosynthetic process BP 0.0320043608518111 AT3G43960//AT4G29270//AT1G30690//ATLUP1//AT1G12080//AT1G62660//CAS1//CYP710A2//AT2G26730 GO:0071669 plant-type cell wall organization or bio... BP 0.0320079140953768 CESA4//ATEXP8//AT3G16370//AT1G55260//AT1G69420//LEA7//AT1G30690//TTL3//PG2//AT1G04680//GEM1//ROPGAP3//AGD10//AT2G26730 GO:0008361 regulation of cell size BP 0.0331134101074534 AT3G16370//PG2//AT1G04680//AT2G26730 GO:0006598 polyamine catabolic process BP 0.0331288392636197 AT4G33420//ATVLN2//AT1G62660 GO:0009664 plant-type cell wall organization BP 0.0331295467385752 ATEXP8//AT3G16370//AT1G55260//AT1G69420//LEA7//AT1G30690//PG2//AT1G04680//ROPGAP3//AGD10//AT2G26730 GO:0009733 response to auxin BP 0.0334578211313365 AT5G50760//SAUR27//SAUR68//AT1G29490//IAA6//AT2G41820//ATCDPK1//JAZ2//AT1G75590//TTL3//IAA3//ABCB6 GO:0009741 response to brassinosteroid BP 0.03358846197838 AT1G67050//SAUR27//AT2G41820//TTL3//IAA3//AT2G36430 GO:0000398 mRNA splicing, via spliceosome BP 0.037418624326804 AT1G22910//U11/U12-31K//ATPTB1 GO:0042335 cuticle development BP 0.037418624326804 LTPG2//AT3G16370//AT1G55260 GO:0055069 zinc ion homeostasis BP 0.0435206562379312 VHA-A2//ATVPS45 GO:0032535 regulation of cellular component size BP 0.0452238671549442 MRH1//AT3G16370//EMB71//PG2//AT1G04680//ARAC9//AT2G26730 GO:0090066 regulation of anatomical structure size BP 0.0452238671549442 MRH1//AT3G16370//EMB71//PG2//AT1G04680//ARAC9//AT2G26730 GO:0033993 response to lipid BP 0.0474078232918886 UBC17//CP1//ATDI8//ATHVA22E//ABF3//AT1G67050//AT3G20300//RCI2A//SAUR27//AT2G41820//ATCDPK1//JAZ2//AT1G11210//TTL3//IAA3//AtHB23//AT2G36430//AT1G62660//AtLEA4-2//AGL20 GO:0019742 pentacyclic triterpenoid metabolic proce... BP 0.0518867981245624 ATLUP1//CAS1//CYP710A2 GO:0019745 pentacyclic triterpenoid biosynthetic pr... BP 0.0518867981245624 ATLUP1//CAS1//CYP710A2 GO:1901615 organic hydroxy compound metabolic proce... BP 0.0546609808013197 RPS14//ATMES9//AT5G51950//AT3G43960//AT4G29270//TROL//GLX2-1//ATCDPK1//AT1G10740//AT1G30690//ATLUP1//AT1G12080//AT1G62660//AT2G29300//CAS1//CYP710A2//BP80-3;2//AT2G26730 GO:0000375 RNA splicing, via transesterification re... BP 0.057226636461912 AT1G22910//U11/U12-31K//ATPTB1 GO:0000377 RNA splicing, via transesterification re... BP 0.057226636461912 AT1G22910//U11/U12-31K//ATPTB1 GO:0016104 triterpenoid biosynthetic process BP 0.057226636461912 ATLUP1//CAS1//CYP710A2 GO:0006970 response to osmotic stress BP 0.0610017331125198 DELTA-TIP2//ATHVA22E//ATTIP2;3//TUB8//ABF3//AT4G23670//ATHKT1//AtLEA4-1//AT3G20300//RCI2A//SNRK2-8//ATCDPK1//JAZ2//TTL3//ADH//AT1G62660//AtLEA4-2//SLT1 GO:0006949 syncytium formation BP 0.0610482596166879 AT3G55420//ATEXP8 GO:0048544 recognition of pollen BP 0.0610482596166879 AT3G51710//AT1G11410 GO:0008202 steroid metabolic process BP 0.0616913648331767 AT3G43960//AT4G29270//AT1G30690//ATLUP1//AT1G12080//AT1G62660//CAS1//CYP710A2//AT2G26730 GO:0006595 polyamine metabolic process BP 0.0628156279123149 AT4G33420//ATVLN2//AT1G62660 GO:0007166 cell surface receptor signaling pathway BP 0.0634848648146922 ATDGK7//MRH1//AT2G41820//AT1G07650//AT2G02780//AT2G26730 GO:0042537 benzene-containing compound metabolic pr... BP 0.0634848648146922 ATMES9//CAX7//ATG8B//TROL//ATCDPK1//BP80-3;2 GO:0055065 metal ion homeostasis BP 0.0662203047761007 ATCBL3//VHA-A2//ATVPS45//ATGLR2.7 GO:0000038 very long-chain fatty acid metabolic pro... BP 0.0686473747191185 LTPG2//AT3G16370//AT1G55260 GO:0006722 triterpenoid metabolic process BP 0.0686473747191185 ATLUP1//CAS1//CYP710A2 GO:0042398 cellular modified amino acid biosyntheti... BP 0.0686473747191185 AT4G33420//ATVLN2//AT1G62660 GO:0008037 cell recognition BP 0.0705652855242188 AT3G51710//AT1G11410 GO:0065008 regulation of biological quality BP 0.0713374174289722 CLEL//APRL7//AT5G02520//AT3G43960//AT4G29270//ATCBL3//LSH9//MRH1//ATNBS1//AT3G16370//EMB71//MLP43//VHA-A2//PG2//AT1G12080//ATVPS45//AT1G04680//AT1G62660//ROPGAP3//AT2G25890//ATGLR2.7//ARAC9//ABCB6//AT2G26690//AT2G26730 GO:0009628 response to abiotic stimulus BP 0.0715760665465369 CLEL//ATHSF1//DELTA-TIP2//AT4G14090//FBH3//CP1//AT3G44820//ATEB1C//ATDI8//ATHVA22E//AT5G48800//ATTIP2;3//TUB8//ADG2//AT5G07330//ABF3//AT4G30400//AT4G23670//TROL//ATHKT1//ATEGY3//AtLEA4-1//AT3G20300//ATNBS1//RCI2A//AT3G10030//AT3G16370//IAA6//ARG1//GLX2-1//ATPER1//SNRK2-8//ATCDPK1//PKS2//JAZ2//AT1G11210//TTL3//PG2//AT1G04680//ADH//AT1G62660//GEM1//ROPGAP3//AtLEA4-2//ATGLR2.7//ABCB6//SLT1//AGL20 GO:0046165 alcohol biosynthetic process BP 0.075889370056993 AT3G43960//AT4G29270//AT1G10740//AT1G30690//ATLUP1//AT1G12080//AT1G62660//AT2G29300//CAS1//CYP710A2//AT2G26730 GO:0014070 response to organic cyclic compound BP 0.0777732921561392 CYCA1;1//TUB8//AT5G02520//ABF3//CRK20//TROL//AT1G67050//ACP//SAUR27//AT2G41820//ATCDPK1//JAZ2//TTL3//IAA3//AT2G36430//ADH//MLP328 GO:1901617 organic hydroxy compound biosynthetic pr... BP 0.0796827162382842 AT3G43960//AT4G29270//TROL//ATCDPK1//AT1G10740//AT1G30690//ATLUP1//AT1G12080//AT1G62660//AT2G29300//CAS1//CYP710A2//BP80-3;2//AT2G26730 GO:0009875 pollen-pistil interaction BP 0.0805256986398356 AT3G51710//AT1G11410 GO:0009958 positive gravitropism BP 0.0805256986398356 CLEL//ARG1 GO:0043473 pigmentation BP 0.0816852747393011 AT3G16370//PG2//AT1G04680//ABCB6//AGL20 GO:0043476 pigment accumulation BP 0.0816852747393011 AT3G16370//PG2//AT1G04680//ABCB6//AGL20 GO:0043478 pigment accumulation in response to UV l... BP 0.0816852747393011 AT3G16370//PG2//AT1G04680//ABCB6//AGL20 GO:0043479 pigment accumulation in tissues in respo... BP 0.0816852747393011 AT3G16370//PG2//AT1G04680//ABCB6//AGL20 GO:0043480 pigment accumulation in tissues BP 0.0816852747393011 AT3G16370//PG2//AT1G04680//ABCB6//AGL20 GO:0043481 anthocyanin accumulation in tissues in r... BP 0.0816852747393011 AT3G16370//PG2//AT1G04680//ABCB6//AGL20 GO:0044085 cellular component biogenesis BP 0.0820199767350009 ACD2//GPP2//ATTIP2;3//CESA4//TUB8//ADG2//IQD11//IQD13//LTPG2//LSH9//MRH1//TROL//AT3G16370//AT1G55260//AT1G72230//EMB71//AT1G69420//ATVLN2//AT1G47410//AT1G54260//TTL3//VHA-A2//PG2//AT1G04680//GEM1//ARAC9//AT2G26730 GO:0055080 cation homeostasis BP 0.0828824967775231 ATCBL3//MLP43//VHA-A2//ATVPS45//ATGLR2.7//AT2G26690 GO:0006270 DNA replication initiation BP 0.0875292042315006 CYCA1;1//WYR//AT5G02520 GO:0006875 cellular metal ion homeostasis BP 0.0875292042315006 VHA-A2//ATVPS45//ATGLR2.7 GO:0016572 histone phosphorylation BP 0.0875292042315006 CYCA1;1//ATEB1C//GEM1 GO:0010817 regulation of hormone levels BP 0.0897969520403201 CLEL//AT3G43960//AT4G29270//LSH9//AT3G16370//PG2//AT1G12080//AT1G04680//AT1G62660//ROPGAP3//ABCB6//AT2G26730 GO:0046916 cellular transition metal ion homeostasi... BP 0.0908884304150409 VHA-A2//ATVPS45 GO:0009605 response to external stimulus BP 0.0932698345040666 CLEL//ACD2//ATMES9//ATEB1C//ADF4//ATTIP2;3//CESA4//AT5G38030//AT5G02520//AT4G23670//CRK20//TROL//ATAIG1//ACP//AT3G16370//AT1G72140//AT1G68300//ARG1//AT1G32530//ATCDPK1//PKS2//JAZ2//VHA-A2//LAX2//SCPL51//PG2//ATVPS45//AT1G04680//ADH//AT1G62660//GEM1//ATGLR2.7//ABCB6//BP80-3;2//AGL20 GO:0010167 response to nitrate BP 0.0974513835970882 DELTA-TIP2//AT5G50760//ATTIP2;3//AT4G33420//ATPAP8//AT1G62660 GO:0016129 phytosteroid biosynthetic process BP 0.0985433392472931 AT3G43960//AT4G29270//AT1G12080//AT1G62660//AT2G26730 GO:0016132 brassinosteroid biosynthetic process BP 0.0985433392472931 AT3G43960//AT4G29270//AT1G12080//AT1G62660//AT2G26730 GO:0048364 root development BP 0.0996133030136027 CLEL//iqd2//AT3G43960//ATDGK7//MRH1//ATAIG1//AT3G16370//EMB71//IAA3//LAX2//PG2//AT1G04680//ROPGAP3//AT2G26730 GO:0015980 energy derivation by oxidation of organi... BP 0.100439595748285 RPS14//ADG2//NAD5//ADH GO:0009414 response to water deprivation BP 0.100734163404319 ATDI8//ATHVA22E//ABF3//AtLEA4-1//AT3G20300//ATPER1//ATCDPK1//JAZ2//AT1G11210//AtLEA4-2 GO:0051258 protein polymerization BP 0.101032877798622 GPP2//TUB8//MRH1//EMB71//AT1G69420//ARAC9//AT2G26730 GO:0022622 root system development BP 0.101761308963471 CLEL//iqd2//AT3G43960//ATDGK7//MRH1//ATAIG1//AT3G16370//EMB71//IAA3//LAX2//PG2//AT1G04680//ROPGAP3//AT2G26730 GO:0030003 cellular cation homeostasis BP 0.103012522364894 MLP43//VHA-A2//ATVPS45//ATGLR2.7//AT2G26690 GO:0050896 response to stimulus BP 0.105513441177951 CLEL//ATHSF1//DELTA-TIP2//AT4G14090//CYCA1;1//FBH3//AT1G30260//ACD2//UBC17//CP1//ATMES9//AT3G44820//AT5G27950//ATEB1C//ATDI8//ADF4//ATHVA22E//AT5G50760//AT5G48800//ATTIP2;3//CESA4//AT5G38030//TUB8//ADG2//AT5G12940//CIPK5//AT5G07330//AT5G02520//AT3G54100//AT4G36140//ABF3//AT4G33420//ATDGK7//AT4G30400//ATCBL3//AT4G23670//AT4G23680//CRK20//MRH1//TROL//ATHKT1//AT1G67050//ATEGY3//AtLEA4-1//TMK1//ATAIG1//AT3G20300//FAB1B//ATNBS1//RCI2A//AT3G10030//ACP//AHP4//SAUR27//AT3G16370//SAUR68//AT1G29490//AT1G72140//IAA6//AT1G68300//ARG1//AT2G41820//GLX2-1//AT1G32530//ATPER1//SNRK2-8//GLN1;5//ATCDPK1//AT1G07650//PKS2//JAZ2//MLP34//MLP43//AT1G73120//AT1G11210//AT1G75590//TTL3//ATPAP8//IAA3//AtHB23//VHA-A2//ATRAB7A//AT2G36430//LAX2//SCPL51//PG2//ATVPS45//AT1G04680//ADH//AT1G61660//AT1G62660//AT2G42900//GEM1//ROPGAP3//MLP328//AtLEA4-2//ATGLR2.7//ARAC9//ABCB6//SLT1//BP80-3;2//AT2G02780//AGL20//AT2G26690//AT2G26730 GO:0071705 nitrogen compound transport BP 0.106591400750474 DELTA-TIP2//AT5G50760//ATTIP2;3//AT5G46310//AT5G11570//AT3G43270//AT4G33420//ATOPT7//AT3G21670//AT1G72140//ATPAP8//LAX2//ATVPS45//AT1G62660//AT2G26690 GO:0006869 lipid transport BP 0.107580948939492 LTPG2//LTPG1//AT1G55260//AT1G73560//ATLTP1 GO:0005976 polysaccharide metabolic process BP 0.107809331726862 ACD2//ATTIP2;3//CESA4//ADG2//IQD11//IQD13//ATGSL11//LSH9//AT3G16370//AT1G72230//AT1G47410//AT1G30690//TTL3//NHL12//ATXTH17//PG2//AT1G04680//AT2G26730 GO:0042545 cell wall modification BP 0.107865530878413 AT4G15980//AT5G27870//AT5G49180//ATGSL11//AT3G43270//ATEXP8//LEA7//ATPMEPCRD//AGD10 GO:0015706 nitrate transport BP 0.109214755818274 DELTA-TIP2//AT5G50760//ATTIP2;3//AT4G33420//ATPAP8//AT1G62660 GO:0098771 inorganic ion homeostasis BP 0.11146758730796 ATCBL3//VHA-A2//ATVPS45//ATGLR2.7 GO:0007167 enzyme linked receptor protein signaling... BP 0.112247148210652 MRH1//AT2G41820//AT1G07650//AT2G02780//AT2G26730 GO:0007169 transmembrane receptor protein tyrosine ... BP 0.112247148210652 MRH1//AT2G41820//AT1G07650//AT2G02780//AT2G26730 GO:0009606 tropism BP 0.112247148210652 CLEL//ATEB1C//ARG1//PKS2//GEM1 GO:0016128 phytosteroid metabolic process BP 0.112247148210652 AT3G43960//AT4G29270//AT1G12080//AT1G62660//AT2G26730 GO:0016131 brassinosteroid metabolic process BP 0.112247148210652 AT3G43960//AT4G29270//AT1G12080//AT1G62660//AT2G26730 GO:0046482 para-aminobenzoic acid metabolic process BP 0.112667812220492 CAX7//ATG8B GO:0009415 response to water BP 0.114651996068502 ATDI8//ATHVA22E//ABF3//AtLEA4-1//AT3G20300//ATPER1//ATCDPK1//JAZ2//AT1G11210//AtLEA4-2 GO:0009725 response to hormone BP 0.117226736304741 AT1G30260//UBC17//CP1//ATDI8//ATHVA22E//AT5G50760//ABF3//TROL//AT1G67050//AT3G20300//RCI2A//AHP4//SAUR27//SAUR68//AT1G29490//IAA6//AT2G41820//ATCDPK1//JAZ2//AT1G11210//AT1G75590//TTL3//IAA3//AtHB23//AT2G36430//AT1G62660//AtLEA4-2//ABCB6//AGL20//AT2G26690 GO:0016126 sterol biosynthetic process BP 0.121672855394688 AT1G30690//ATLUP1//AT1G12080//CAS1//CYP710A2//AT2G26730 GO:0050801 ion homeostasis BP 0.121672855394688 ATCBL3//MLP43//VHA-A2//ATVPS45//ATGLR2.7//AT2G26690 GO:0006873 cellular ion homeostasis BP 0.121866561980227 MLP43//VHA-A2//ATVPS45//ATGLR2.7//AT2G26690 GO:0007015 actin filament organization BP 0.131857373113506 PFN2//MRH1//EMB71//ATVLN2//ARAC9 GO:0002682 regulation of immune system process BP 0.132825078716336 ACD2//AT5G27950//ADF4//TROL//ATCDPK1//JAZ2//ATVPS45//AT1G61660 GO:0045088 regulation of innate immune response BP 0.132825078716336 ACD2//AT5G27950//ADF4//TROL//ATCDPK1//JAZ2//ATVPS45//AT1G61660 GO:0050776 regulation of immune response BP 0.132825078716336 ACD2//AT5G27950//ADF4//TROL//ATCDPK1//JAZ2//ATVPS45//AT1G61660 GO:0048469 cell maturation BP 0.13331429266831 iqd2//AT3G43960//MRH1//ATAIG1//AT3G16370//EMB71//PG2//AT1G04680//ROPGAP3 GO:0048764 trichoblast maturation BP 0.13331429266831 iqd2//AT3G43960//MRH1//ATAIG1//AT3G16370//EMB71//PG2//AT1G04680//ROPGAP3