GOID	TERM	ONTOLOGY	pValue	Genes
GO:0008033	tRNA processing	BP	0.00448457515008431	AT3G02320//AT1G36310//AtTRM82
GO:0006400	tRNA modification	BP	0.00915670847896758	AT1G36310//AtTRM82
GO:0071731	response to nitric oxide	BP	0.00915670847896758	AT1G76800//ACO1
GO:0071732	cellular response to nitric oxide	BP	0.00915670847896758	AT1G76800//ACO1
GO:0006357	regulation of transcription from RNA pol...	BP	0.0104933539261247	PTAC13//PP2CG1
GO:0033554	cellular response to stress	BP	0.0109413316634548	ATMSH3//B73//AtMYB28//ATLIG4//AT4G31860//AT3G25930//ATACP5//AT3G09250//AT1G76800//SEL1//UNE4//HIPP22//AtRLP19//ACO1//PVA12//ATMAK3//PP2CG1
GO:1902170	cellular response to reactive nitrogen s...	BP	0.0119106586132116	AT1G76800//ACO1
GO:1990267	response to transition metal nanoparticl...	BP	0.0121905229778571	ATLAC15//AT1G76800//ATGRP7//ACO1
GO:0009267	cellular response to starvation	BP	0.0142809634025571	AtMYB28//AT4G31860//AT3G25930//ATACP5//SEL1//HIPP22
GO:0042594	response to starvation	BP	0.0153332148563564	AtMYB28//AT4G31860//AT3G25930//ATACP5//SEL1//HIPP22
GO:0006807	nitrogen compound metabolic process	BP	0.0154972592846653	AtERF71//ATMSH3//FCA//B73//AtMYB9//ARRPS1//AT5G26360//ENY//ATCAP-E1//AtMYB28//RUG3//ATLIG4//BEL1//AT5G23550//ABAR//AT5G11870//GSTL3//CRF6//AT3G61540//ATIPS1//MRPL11//TCP2//AT3G06200//MMD1//ATACP5//PTAC13//AT3G09250//AT3G02320//AT3G11620//AT1G36310//AT2G47310//AT1G19340//AT1G33110//AtTRM82//ALDH6B2//ATGRP7//NERD//AT2G37020//UNE4//HIPP22//AtRLP19//PVA12//ATLEUD1//ATMAK3//PP2CG1
GO:0000097	sulfur amino acid biosynthetic process	BP	0.0164382259177755	AT5G23550//GSTL3//AT3G61540//AT3G11620//AT1G33110//ATLEUD1
GO:0031669	cellular response to nutrient levels	BP	0.0172048002521958	AtMYB28//AT4G31860//AT3G25930//ATACP5//SEL1//HIPP22
GO:0044272	sulfur compound biosynthetic process	BP	0.0194816397744551	AtMYB28//AT5G23550//GSTL3//AT3G61540//ATIPS1//AT3G11620//AT1G33110//ATLEUD1
GO:0031667	response to nutrient levels	BP	0.0209601946384824	AtMYB28//AT4G31860//AT3G25930//ATACP5//SEL1//HIPP22
GO:0001101	response to acid chemical	BP	0.0222748092606825	B73//AtMYB9//ENY//AT5G64010//ATHVA22B//AtMYB28//BEL1//MAPKKK20//AT4G31860//AT3G25930//SEL1//ATGRP7//GES//ORG4//AtRLP19//ACO1//PP2CG1
GO:0009610	response to symbiotic fungus	BP	0.0239415058470987	AT4G31860//AT1G33110
GO:0009608	response to symbiont	BP	0.0259411687865358	AT4G31860//AT1G33110
GO:0071281	cellular response to iron ion	BP	0.0259411687865358	AT1G76800//ACO1
GO:0000096	sulfur amino acid metabolic process	BP	0.0267838850779346	AT5G23550//GSTL3//AT3G61540//AT3G11620//AT1G33110//ATLEUD1
GO:0016144	S-glycoside biosynthetic process	BP	0.0268797239041232	AtMYB28//GSTL3//ATIPS1//ATLEUD1
GO:0019758	glycosinolate biosynthetic process	BP	0.0268797239041232	AtMYB28//GSTL3//ATIPS1//ATLEUD1
GO:0019761	glucosinolate biosynthetic process	BP	0.0268797239041232	AtMYB28//GSTL3//ATIPS1//ATLEUD1
GO:0031668	cellular response to extracellular stimu...	BP	0.0278491201121214	AtMYB28//AT4G31860//AT3G25930//ATACP5//SEL1//HIPP22
GO:0071496	cellular response to external stimulus	BP	0.0278491201121214	AtMYB28//AT4G31860//AT3G25930//ATACP5//SEL1//HIPP22
GO:1901607	alpha-amino acid biosynthetic process	BP	0.031553634243784	AT5G23550//GSTL3//AT3G61540//ATIPS1//AT3G11620//AT1G33110//ATLEUD1
GO:0046483	heterocycle metabolic process	BP	0.0316100982585676	AtERF71//ATMSH3//FCA//B73//AtMYB9//ARRPS1//AT5G26360//ENY//ATCAP-E1//AtMYB28//RUG3//ATLIG4//ATLAC15//BEL1//AT5G23550//ABAR//CRF6//MRPL11//TCP2//AT3G06200//MMD1//ATACP5//PTAC13//AT3G09250//AT3G02320//AT3G11620//AT1G36310//AT2G47310//AT1G19340//AtTRM82//ALDH6B2//ATGRP7//NERD//AT2G37020//UNE4//HIPP22//AtRLP19//ATLEUD1//ATMAK3//PP2CG1
GO:0019374	galactolipid metabolic process	BP	0.0320042347837349	AT4G31860//ATACP5//HIPP22
GO:0019375	galactolipid biosynthetic process	BP	0.0320042347837349	AT4G31860//ATACP5//HIPP22
GO:0071248	cellular response to metal ion	BP	0.032325946917786	AT1G76800//ACO1
GO:0008380	RNA splicing	BP	0.0326462079982445	RUG3//AT5G23550//AT3G11620//AT2G47310//ATGRP7
GO:0031048	chromatin silencing by small RNA	BP	0.0332546313085451	FCA//ATCAP-E1//NERD
GO:0009991	response to extracellular stimulus	BP	0.0335961333525899	AtMYB28//AT4G31860//AT3G25930//ATACP5//SEL1//HIPP22
GO:0046474	glycerophospholipid biosynthetic process	BP	0.03556874092496	AT5G56520//AT5G23550//ATIPS1//PTAC13
GO:0034614	cellular response to reactive oxygen spe...	BP	0.0392572492074826	AT1G76800//ACO1
GO:0071241	cellular response to inorganic substance	BP	0.0392572492074826	AT1G76800//ACO1
GO:0006643	membrane lipid metabolic process	BP	0.0394496450974698	AT5G11870//AT4G31860//ATACP5//HIPP22
GO:0045017	glycerolipid biosynthetic process	BP	0.0435634925423775	AT5G56520//AT5G23550//ATIPS1//PTAC13
GO:0009247	glycolipid biosynthetic process	BP	0.0441568344958889	AT4G31860//ATACP5//HIPP22
GO:0009414	response to water deprivation	BP	0.0457735288117143	AT5G64010//MAPKKK20//AT4G31860//ATGRP7//GES//PP2CG1
GO:0016036	cellular response to phosphate starvatio...	BP	0.0471282004482621	AT4G31860//ATACP5//HIPP22
GO:0009415	response to water	BP	0.0480390049039096	AT5G64010//MAPKKK20//AT4G31860//ATGRP7//GES//PP2CG1
GO:0006725	cellular aromatic compound metabolic pro...	BP	0.0495485991455814	AtERF71//ATMSH3//FCA//AtMYB9//ARRPS1//AT5G26360//ENY//ATCAP-E1//AtMYB28//RUG3//ATLIG4//ATLAC15//BEL1//AT5G23550//ABAR//CRF6//MRPL11//TCP2//CYP704B1//AT3G06200//MMD1//ATACP5//PTAC13//AT3G09250//AT3G02320//AT3G11620//AT1G36310//AT2G47310//AT1G19340//AtTRM82//ALDH6B2//ATGRP7//NERD//AT2G37020//UNE4//HIPP22//AtRLP19//PVA12//ATLEUD1//ATMAK3//PP2CG1
GO:0016143	S-glycoside metabolic process	BP	0.0501708419816842	AtMYB28//GSTL3//ATIPS1//ATLEUD1
GO:0019757	glycosinolate metabolic process	BP	0.0501708419816842	AtMYB28//GSTL3//ATIPS1//ATLEUD1
GO:0019760	glucosinolate metabolic process	BP	0.0501708419816842	AtMYB28//GSTL3//ATIPS1//ATLEUD1
GO:0019344	cysteine biosynthetic process	BP	0.0524893578301378	GSTL3//AT3G61540//AT1G33110//ATLEUD1
GO:0034641	cellular nitrogen compound metabolic pro...	BP	0.0533394957435282	AtERF71//ATMSH3//FCA//AtMYB9//ARRPS1//AT5G26360//ENY//ATCAP-E1//AtMYB28//RUG3//ATLIG4//BEL1//AT5G23550//ABAR//AT5G11870//CRF6//MRPL11//TCP2//AT3G06200//MMD1//ATACP5//PTAC13//AT3G09250//AT3G02320//AT3G11620//AT1G36310//AT2G47310//AT1G19340//AtTRM82//ALDH6B2//ATGRP7//NERD//AT2G37020//UNE4//HIPP22//AtRLP19//ATLEUD1//ATMAK3//PP2CG1
GO:0008652	cellular amino acid biosynthetic process	BP	0.0544285274007474	AT5G23550//GSTL3//AT3G61540//ATIPS1//AT3G11620//AT1G33110//ATLEUD1
GO:0006534	cysteine metabolic process	BP	0.0548656497982482	GSTL3//AT3G61540//AT1G33110//ATLEUD1
GO:0034660	ncRNA metabolic process	BP	0.0552478223077866	ARRPS1//AT5G26360//PTAC13//AT3G02320//AT1G36310//AtTRM82
GO:0090304	nucleic acid metabolic process	BP	0.0564689571427645	AtERF71//ATMSH3//FCA//AtMYB9//ARRPS1//AT5G26360//ENY//ATCAP-E1//AtMYB28//RUG3//ATLIG4//BEL1//AT5G23550//CRF6//MRPL11//TCP2//MMD1//ATACP5//PTAC13//AT3G09250//AT3G02320//AT3G11620//AT1G36310//AT2G47310//AtTRM82//ATGRP7//NERD//UNE4//HIPP22//AtRLP19//ATMAK3//PP2CG1
GO:0006399	tRNA metabolic process	BP	0.0582785818127522	AT3G02320//AT1G36310//AtTRM82
GO:0006664	glycolipid metabolic process	BP	0.0582785818127522	AT4G31860//ATACP5//HIPP22
GO:0044550	secondary metabolite biosynthetic proces...	BP	0.0584663614140466	AtMYB28//ATLAC15//GSTL3//ATIPS1//ATLEUD1
GO:0034599	cellular response to oxidative stress	BP	0.0601167402732546	AT1G76800//ACO1
GO:1901360	organic cyclic compound metabolic proces...	BP	0.0626602234798766	AtERF71//ATMSH3//FCA//B73//AtMYB9//ARRPS1//AT5G26360//ENY//ATCAP-E1//AtMYB28//RUG3//ATLIG4//ATLAC15//BEL1//AT5G23550//ABAR//CRF6//MRPL11//TCP2//AT3G06200//MMD1//ATACP5//PTAC13//AT3G09250//AT3G02320//AT3G11620//AT1G36310//AT2G47310//AT1G19340//AtTRM82//ALDH6B2//ATGRP7//NERD//AT2G37020//UNE4//HIPP22//AtRLP19//PVA12//ATLEUD1//ATMAK3//PP2CG1//BAS1
GO:0009070	serine family amino acid biosynthetic pr...	BP	0.0636343431619478	GSTL3//AT3G61540//AT1G33110//ATLEUD1
GO:1903509	liposaccharide metabolic process	BP	0.0651592897991555	AT4G31860//ATACP5//HIPP22
GO:0010039	response to iron ion	BP	0.0658131620674893	AT1G76800//ACO1
GO:0016070	RNA metabolic process	BP	0.0682057259230229	AtERF71//FCA//AtMYB9//ARRPS1//AT5G26360//ENY//ATCAP-E1//AtMYB28//RUG3//BEL1//AT5G23550//CRF6//MRPL11//TCP2//MMD1//ATACP5//PTAC13//AT3G02320//AT3G11620//AT1G36310//AT2G47310//AtTRM82//ATGRP7//NERD//UNE4//HIPP22//AtRLP19//PP2CG1
GO:0009734	auxin-activated signaling pathway	BP	0.0687266079674054	B73//LCR
GO:0000302	response to reactive oxygen species	BP	0.0690883803277465	MAPKKK20//ATACP5//AT1G76800//GES//ACO1
GO:0034470	ncRNA processing	BP	0.0690883803277465	ARRPS1//AT5G26360//AT3G02320//AT1G36310//AtTRM82
GO:0006139	nucleobase-containing compound metabolic...	BP	0.0709042591857609	AtERF71//ATMSH3//FCA//AtMYB9//ARRPS1//AT5G26360//ENY//ATCAP-E1//AtMYB28//RUG3//ATLIG4//BEL1//AT5G23550//CRF6//MRPL11//TCP2//AT3G06200//MMD1//ATACP5//PTAC13//AT3G09250//AT3G02320//AT3G11620//AT1G36310//AT2G47310//AT1G19340//AtTRM82//ATGRP7//NERD//AT2G37020//UNE4//HIPP22//AtRLP19//ATMAK3//PP2CG1
GO:0010029	regulation of seed germination	BP	0.071681931555107	ENY//BRIZ1
GO:0006790	sulfur compound metabolic process	BP	0.0738103601439368	AtMYB28//AT5G23550//GSTL3//AT3G61540//ATIPS1//AT3G11620//AT1G33110//ATLEUD1
GO:0042221	response to chemical	BP	0.0768549880860953	ATMSH3//B73//AtMYB9//ENY//AT5G64010//ATHVA22B//ATCAP-E1//AtMYB28//ATLAC15//BEL1//GSTL3//MAPKKK20//AT4G31860//CKL6//AFB4//AT3G25930//ATACP5//AT1G76800//AT1G33110//SEL1//ATGRP7//UNE4//LCR//GES//ORG4//AtRLP19//ACO1//PVA12//AT2G46690//PP2CG1//BAS1
GO:1900140	regulation of seedling development	BP	0.0777134959268873	ENY//BRIZ1
GO:0033993	response to lipid	BP	0.0808500107812256	B73//AtMYB9//ENY//ATHVA22B//AtMYB28//GES//ACO1//PP2CG1//BAS1
GO:0006650	glycerophospholipid metabolic process	BP	0.0832327892793777	AT5G56520//AT5G23550//ATIPS1//PTAC13
GO:1901700	response to oxygen-containing compound	BP	0.083441375072687	B73//AtMYB9//ENY//AT5G64010//ATHVA22B//AtMYB28//BEL1//MAPKKK20//AT4G31860//CKL6//AT3G25930//ATACP5//AT1G76800//SEL1//ATGRP7//GES//ORG4//AtRLP19//ACO1//PP2CG1//BAS1
GO:0006366	transcription from RNA polymerase II pro...	BP	0.0838986206928064	PTAC13//PP2CG1
GO:0071365	cellular response to auxin stimulus	BP	0.0838986206928064	B73//LCR
GO:0042744	hydrogen peroxide catabolic process	BP	0.0902283807224985	AT4G16190//GSTL3
GO:0045892	negative regulation of transcription, DN...	BP	0.0907184637965454	FCA//ATCAP-E1//ATACP5//NERD//HIPP22
GO:1902679	negative regulation of RNA biosynthetic ...	BP	0.0907184637965454	FCA//ATCAP-E1//ATACP5//NERD//HIPP22
GO:1903507	negative regulation of nucleic acid-temp...	BP	0.0907184637965454	FCA//ATCAP-E1//ATACP5//NERD//HIPP22
GO:0046467	membrane lipid biosynthetic process	BP	0.0919628045854724	AT4G31860//ATACP5//HIPP22
GO:0051253	negative regulation of RNA metabolic pro...	BP	0.0920128375213765	FCA//ATCAP-E1//ATACP5//NERD//HIPP22
GO:0006891	intra-Golgi vesicle-mediated transport	BP	0.0934447922958287	AT4G26550//AT2G38410
GO:0046777	protein autophosphorylation	BP	0.0940295580615651	AT3G60320//CKL6//PVA12
GO:1901699	cellular response to nitrogen compound	BP	0.0961154485603383	ATCAP-E1//AT1G76800//ACO1
GO:1901659	glycosyl compound biosynthetic process	BP	0.0972247523375635	AtMYB28//GSTL3//ATIPS1//ATLEUD1
GO:0045934	negative regulation of nucleobase-contai...	BP	0.0972857060426622	FCA//ATCAP-E1//ATACP5//NERD//HIPP22
GO:0051716	cellular response to stimulus	BP	0.0979389582744021	ATMSH3//B73//ENY//ATCAP-E1//AtMYB28//ATLIG4//AT5G45210//AT5G43870//BEL1//AT4G31860//AFB4//AT3G25930//ATACP5//AT3G09250//AT1G76800//SEL1//UNE4//LCR//HIPP22//GES//AtRLP19//ACO1//PVA12//ATMAK3//PP2CG1
GO:0046486	glycerolipid metabolic process	BP	0.098843947371724	AT5G56520//AT5G23550//ATIPS1//PTAC13
GO:0009620	response to fungus	BP	0.0994663290279773	B73//AtMYB28//AT4G31860//AT3G25930//AT1G33110//GES
GO:0009410	response to xenobiotic stimulus	BP	0.0999754259007321	ATMSH3//UNE4
GO:0006298	mismatch repair	BP	0.100155505622552	236_
GO:0006551	leucine metabolic process	BP	0.100155505622552	395_
GO:0006672	ceramide metabolic process	BP	0.100155505622552	342_
GO:0007140	male meiosis	BP	0.100155505622552	517_
GO:0016050	vesicle organization	BP	0.100155505622552	032_
GO:0055062	phosphate ion homeostasis	BP	0.100155505622552	158_
GO:0055083	monovalent inorganic anion homeostasis	BP	0.100155505622552	158_
GO:0072506	trivalent inorganic anion homeostasis	BP	0.100155505622552	158_
GO:1900376	regulation of secondary metabolite biosy...	BP	0.100155505622552	549_
GO:0051172	negative regulation of nitrogen compound...	BP	0.101339535090856	FCA//ATCAP-E1//ATACP5//NERD//HIPP22
GO:1901564	organonitrogen compound metabolic proces...	BP	0.101520560598311	B73//ARRPS1//AT5G23550//ABAR//AT5G11870//GSTL3//AT3G61540//ATIPS1//AT3G06200//AT3G11620//AT1G33110//AtTRM82//ALDH6B2//AT2G37020//PVA12//ATLEUD1