4.0:Analysis result:Information of module
Col0 roots 2hr KNO3 nitrogen

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0035670
plant-type ovary development
BP1.597e-04AT5G47190 BEL1 EDD ATH1 ATMKK2 ATHB-14
GO:0048481
ovule development
BP1.597e-04AT5G47190 BEL1 EDD ATH1 ATMKK2 ATHB-14
GO:0048440
carpel development
BP1.890e-03AT5G47190 BEL1 EDD ATH1 ATMKK2 ATHB-14
GO:0048467
gynoecium development
BP2.152e-03AT5G47190 BEL1 EDD ATH1 ATMKK2 ATHB-14
GO:0048522
positive regulation of cellular process
BP7.254e-03HEMC ATH1 AFC2 AT3G20010 ELF7 DUO3 AT1G16210 AtXRN3 AT2G27290 ATNRAMP3 ATHB-14
GO:0008152
metabolic process
BP7.576e-03HISN5B AT4G16330 HEMC AtRbcX2 ATU2AF65A AT5G16900 ASD2 CYP71B14 UBC3 AT5G58800 UBP23 AT5G51140 AT5G47190 CML37 BEL1 TOM20-4 NIC2 AT5G13410 AT5G06260 ATDPB GATL7 PIF6 AT3G60910 AT3G56050 ATJRG21 LOG4 EDD DRL1 ATH1 ATMKK2 AT4G29590 AFC2 CRK12 AT4G13550 ATCTC1 AtMYB74 ATBZIP54 ATDET1 AT3G20010 CYP705A20 ATAIG1 ATFKBP42 AtMYB108 AT3G05410 AT3G07790 GCT ATMSRB1 GLX2-1 ATQSOX1 ELF7 AT1G07870 CLPR1 NF-YA7 DUO3 AT1G16210 AT1G14910 AtXRN3 TAF6B AT2G21385 AT2G42780 AT1G02020 ATRBOHB AT1G76970 AT2G27290 OTLD1 AT2G11270 AT2G18890 PIP5K5 ATNRAMP3 ATHB-14 ARSK1
GO:0010556
regulation of macromolecule biosynthetic...
BP7.943e-03HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:2000112
regulation of cellular macromolecule bio...
BP7.943e-03HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0010468
regulation of gene expression
BP8.031e-03HEMC AT5G58800 AT5G47190 BEL1 ATDPB ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0090558
plant epidermis development
BP9.099e-03AT5G47190 ATDPB ATH1 ATMKK2 ATAIG1 DUO3 ATHB-14 ARSK1
GO:0006355
regulation of transcription, DNA-templat...
BP9.913e-03HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:1903506
regulation of nucleic acid-templated tra...
BP9.913e-03HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:2001141
regulation of RNA biosynthetic process
BP9.913e-03HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0031326
regulation of cellular biosynthetic proc...
BP9.929e-03HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0030968
endoplasmic reticulum unfolded protein r...
BP1.036e-02CML37 ATMKK2 ATBZIP54 AT1G76970
GO:0051252
regulation of RNA metabolic process
BP1.065e-02HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0006986
response to unfolded protein
BP1.084e-02CML37 ATMKK2 ATBZIP54 AT1G76970
GO:0034620
cellular response to unfolded protein
BP1.084e-02CML37 ATMKK2 ATBZIP54 AT1G76970
GO:0035967
cellular response to topologically incor...
BP1.084e-02CML37 ATMKK2 ATBZIP54 AT1G76970
GO:0018208
peptidyl-proline modification
BP1.353e-02AT5G13410 ATFKBP42
GO:0019219
regulation of nucleobase-containing comp...
BP1.603e-02HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0009889
regulation of biosynthetic process
BP1.641e-02HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0009965
leaf morphogenesis
BP1.701e-02HEMC ATH1 AT2G27290 ATHB-14
GO:0051171
regulation of nitrogen compound metaboli...
BP1.824e-02HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0060255
regulation of macromolecule metabolic pr...
BP2.013e-02HEMC AT5G58800 AT5G47190 BEL1 ATDPB ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0090626
plant epidermis morphogenesis
BP2.046e-02AT5G47190 ATDPB ATH1 DUO3 ATHB-14
GO:0048827
phyllome development
BP2.182e-02HEMC AT5G47190 BEL1 EDD ATH1 ATMKK2 ATFKBP42 AT2G27290 ATHB-14
GO:0010228
vegetative to reproductive phase transit...
BP2.259e-02UBC3 AT5G47190 AT3G58560 ATH1 GLX2-1 DUO3 ATHB-14
GO:0019321
pentose metabolic process
BP2.283e-02ASD2 AT3G07790
GO:0031323
regulation of cellular metabolic process
BP2.299e-02HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATNRAMP3 ATHB-14
GO:0048518
positive regulation of biological proces...
BP2.481e-02HEMC ATH1 AFC2 AT3G20010 ATQSOX1 ELF7 DUO3 AT1G16210 AtXRN3 AT2G27290 ATNRAMP3 ATHB-14
GO:0035966
response to topologically incorrect prot...
BP2.531e-02CML37 ATMKK2 ATBZIP54 AT1G16210 AT1G76970
GO:0048438
floral whorl development
BP2.647e-02AT5G47190 BEL1 EDD ATH1 ATMKK2 ATHB-14
GO:0016197
endosomal transport
BP2.936e-02VPS26A AT1G16210
GO:0052542
defense response by callose deposition
BP3.168e-02CML37 AtMYB108
GO:0016070
RNA metabolic process
BP3.419e-02HEMC ATU2AF65A AT5G58800 AT5G51140 AT5G47190 BEL1 TOM20-4 ATDPB EDD ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0009653
anatomical structure morphogenesis
BP3.455e-02HEMC VPS26A AT5G47190 ATDPB DRL1 ATH1 AT3G20010 ATAIG1 DUO3 AtXRN3 AT2G27290 PIP5K5 ATHB-14 ARSK1
GO:0006351
transcription, DNA-templated
BP3.477e-02HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0097659
nucleic acid-templated transcription
BP3.477e-02HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0009640
photomorphogenesis
BP3.501e-02ATH1 ATDET1 ELF7 ATHB-14
GO:0032774
RNA biosynthetic process
BP3.504e-02HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0010467
gene expression
BP3.658e-02HEMC ATU2AF65A AT5G58800 AT5G51140 AT5G47190 BEL1 TOM20-4 ATDPB EDD ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0080090
regulation of primary metabolic process
BP3.662e-02HEMC AT5G58800 BEL1 ATDPB ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0009888
tissue development
BP3.871e-02AT5G47190 ATDPB PIF6 ATH1 ATMKK2 AT3G20010 ATAIG1 DUO3 AtXRN3 ATHB-14 ARSK1
GO:0048469
cell maturation
BP3.914e-02ATAIG1 DUO3 ATHB-14 ARSK1
GO:0048764
trichoblast maturation
BP3.914e-02ATAIG1 DUO3 ATHB-14 ARSK1
GO:0048765
root hair cell differentiation
BP3.914e-02ATAIG1 DUO3 ATHB-14 ARSK1
GO:0009887
organ morphogenesis
BP4.146e-02HEMC ATH1 DUO3 AtXRN3 AT2G27290 ATHB-14
GO:0048731
system development
BP4.183e-02HEMC UBC3 AT5G47190 BEL1 AT3G58560 EDD DRL1 ATH1 ATMKK2 ATDET1 AT3G20010 ATAIG1 ATFKBP42 GLX2-1 ELF7 DUO3 AtXRN3 AT2G27290 ATHB-14 ARSK1
GO:0009695
jasmonic acid biosynthetic process
BP4.227e-02ATH1 AtMYB74 AtMYB108
GO:0016579
protein deubiquitination
BP4.431e-02ELF7 OTLD1
GO:0090304
nucleic acid metabolic process
BP4.573e-02HEMC ATU2AF65A AT5G58800 AT5G51140 AT5G47190 BEL1 TOM20-4 ATDPB EDD ATH1 ATMKK2 AFC2 ATCTC1 AtMYB74 ATBZIP54 ATDET1 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0034654
nucleobase-containing compound biosynthe...
BP4.632e-02HEMC AT5G58800 UBP23 BEL1 ATDPB ATH1 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0048856
anatomical structure development
BP4.681e-02HEMC UBC3 VPS26A AT5G51140 AT5G47190 BEL1 ATDPB PIF6 AT3G58560 EDD DRL1 ATH1 ATMKK2 ATDET1 AT3G20010 ATAIG1 ATFKBP42 GLX2-1 ELF7 DUO3 AtXRN3 AT2G27290 PIP5K5 ATHB-14 ARSK1
GO:0021700
developmental maturation
BP4.700e-02ATAIG1 DUO3 ATHB-14 ARSK1
GO:0000723
telomere maintenance
BP4.703e-02ATCTC1 AtXRN3
GO:0032200
telomere organization
BP4.703e-02ATCTC1 AtXRN3
GO:0050794
regulation of cellular process
BP4.893e-02HEMC CLE21 AT5G58800 AT5G45200 CML37 BEL1 ATDPB PIF6 ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT AT1G73200 ATQSOX1 ELF7 NF-YA7 DUO3 AT1G16210 AtXRN3 TAF6B AT2G42780 AT1G76970 AT2G27290 OTLD1 ATNRAMP3 ATHB-14
GO:0010054
trichoblast differentiation
BP4.939e-02ATAIG1 DUO3 ATHB-14 ARSK1
GO:0060249
anatomical structure homeostasis
BP4.980e-02ATCTC1 AtXRN3
GO:0016036
cellular response to phosphate starvatio...
BP5.026e-02ATAIG1 AT1G26730 NF-YA7
GO:0006139
nucleobase-containing compound metabolic...
BP5.096e-02HEMC ATU2AF65A AT5G58800 UBP23 AT5G51140 AT5G47190 BEL1 TOM20-4 NIC2 ATDPB EDD ATH1 ATMKK2 AFC2 ATCTC1 AtMYB74 ATBZIP54 ATDET1 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATHB-14
GO:0033044
regulation of chromosome organization
BP5.195e-02DUO3 AtXRN3 ATHB-14
GO:0044260
cellular macromolecule metabolic process
BP5.346e-02HEMC AtRbcX2 ATU2AF65A AT5G16900 UBC3 AT5G58800 UBP23 AT5G51140 AT5G47190 BEL1 TOM20-4 AT5G13410 AT5G06260 ATDPB PIF6 AT3G56050 EDD ATH1 ATMKK2 AFC2 CRK12 ATCTC1 AtMYB74 ATBZIP54 ATDET1 AT3G20010 ATAIG1 ATFKBP42 AtMYB108 GCT ATMSRB1 ELF7 AT1G07870 NF-YA7 DUO3 AT1G16210 AT1G14910 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 AT2G18890 ATHB-14 ARSK1
GO:0010090
trichome morphogenesis
BP5.365e-02ATDPB DUO3 ATHB-14
GO:0010053
root epidermal cell differentiation
BP5.438e-02ATAIG1 DUO3 ATHB-14 ARSK1
GO:0048366
leaf development
BP5.480e-02HEMC ATH1 ATFKBP42 AT2G27290 ATHB-14
GO:0042180
cellular ketone metabolic process
BP5.539e-02HEMC ATH1 GLX2-1
GO:0090627
plant epidermal cell differentiation
BP5.567e-02ATAIG1 DUO3 ATHB-14 ARSK1
GO:0032502
developmental process
BP5.677e-02HEMC UBC3 VPS26A AT5G51140 AT5G47190 BEL1 ATDPB PIF6 AT3G58560 EDD DRL1 ATH1 ATMKK2 ATDET1 AT3G20010 ATAIG1 ATFKBP42 GCT GLX2-1 ELF7 DUO3 AtXRN3 ATRBOHB AT2G27290 PIP5K5 ATHB-14 ARSK1
GO:0019222
regulation of metabolic process
BP5.972e-02HEMC AT5G58800 AT5G47190 BEL1 ATDPB ATH1 ATMKK2 AFC2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT2G27290 OTLD1 ATNRAMP3 ATHB-14
GO:0019438
aromatic compound biosynthetic process
BP6.056e-02HISN5B HEMC AT5G58800 UBP23 BEL1 ATDPB DRL1 ATH1 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 GCT ELF7 NF-YA7 AtXRN3 TAF6B AT2G42780 AT1G76970 AT2G27290 OTLD1 ATHB-14
GO:0009694
jasmonic acid metabolic process
BP6.260e-02ATH1 AtMYB74 AtMYB108
GO:0010026
trichome differentiation
BP6.447e-02ATDPB DUO3 ATHB-14
GO:0048437
floral organ development
BP6.486e-02AT5G47190 BEL1 EDD ATH1 ATMKK2 ATHB-14
GO:0006396
RNA processing
BP6.621e-02ATU2AF65A AT5G51140 AT5G47190 TOM20-4 AFC2 AT3G20010 TAF6B
GO:0030154
cell differentiation
BP6.757e-02HEMC ATDPB ATH1 ATAIG1 DUO3 AT2G27290 PIP5K5 ATHB-14 ARSK1
GO:0006366
transcription from RNA polymerase II pro...
BP6.762e-02GCT TAF6B
GO:0043412
macromolecule modification
BP6.810e-02HEMC AT5G16900 AT5G51140 AT5G13410 AT5G06260 AT3G56050 ATH1 ATMKK2 AFC2 CRK12 AT3G20010 ATFKBP42 ATMSRB1 ELF7 AT1G07870 DUO3 AT1G14910 OTLD1 AT2G18890 ATHB-14 ARSK1
GO:0044707
single-multicellular organism process
BP6.836e-02HEMC UBC3 AT5G51140 AT5G47190 BEL1 AT3G58560 EDD DRL1 ATH1 ATMKK2 ATDET1 AT3G20010 ATAIG1 ATFKBP42 GCT GLX2-1 ELF7 DUO3 AtXRN3 ATRBOHB AT2G27290 PIP5K5 ATHB-14 ARSK1
GO:0007154
cell communication
BP7.113e-02CLE21 AT5G45200 CML37 BEL1 PIF6 ATMKK2 AtMYB74 ATBZIP54 AT3G20010 ATAIG1 AtMYB108 AT1G73200 AT1G26730 NF-YA7 ATRBOHB AT1G76970 ATHB-14
GO:0044767
single-organism developmental process
BP7.164e-02HEMC UBC3 VPS26A AT5G51140 AT5G47190 BEL1 ATDPB AT3G58560 EDD DRL1 ATH1 ATMKK2 ATDET1 AT3G20010 ATAIG1 ATFKBP42 GCT GLX2-1 ELF7 DUO3 AtXRN3 ATRBOHB AT2G27290 PIP5K5 ATHB-14 ARSK1
GO:0048523
negative regulation of cellular process
BP7.218e-02AT5G58800 ATH1 ATMKK2 AT3G20010 NF-YA7 AtXRN3 AT1G76970 OTLD1
GO:0010638
positive regulation of organelle organiz...
BP7.219e-02DUO3 AtXRN3 ATHB-14
GO:0042138
meiotic DNA double-strand break formatio...
BP7.396e-02AtXRN3 ATHB-14
GO:0006952
defense response
BP7.464e-02HEMC ATU2AF65A AT5G47190 AT5G45200 CML37 BEL1 AT3G46730 ATMKK2 AT3G20010 AtMYB108 ATRBOHB AT1G76970 ATNRAMP3
GO:0048869
cellular developmental process
BP7.466e-02HEMC VPS26A ATDPB DRL1 ATH1 ATAIG1 DUO3 AT2G27290 PIP5K5 ATHB-14 ARSK1
GO:0048468
cell development
BP7.624e-02ATDPB ATAIG1 DUO3 PIP5K5 ATHB-14 ARSK1
GO:0009639
response to red or far red light
BP7.671e-02PIF6 ATH1 ATDET1 ELF7 ATHB-14
GO:0048581
negative regulation of post-embryonic de...
BP7.721e-02ATDET1 ELF7
GO:0009605
response to external stimulus
BP7.749e-02HEMC ATU2AF65A AT5G14940 AT5G47190 BEL1 ATMKK2 AT3G20010 ATAIG1 AtMYB108 AT1G26730 NF-YA7 AT1G16210 ATRBOHB AT1G76970 OTLD1 ATNRAMP3
GO:0051130
positive regulation of cellular componen...
BP7.824e-02DUO3 AtXRN3 ATHB-14
GO:0044710
single-organism metabolic process
BP7.887e-02HISN5B AT4G16330 HEMC ASD2 CYP71B14 UBP23 AT5G51140 AT5G47190 NIC2 ATDPB GATL7 ATJRG21 LOG4 EDD ATH1 ATMKK2 AT4G13550 ATCTC1 AtMYB74 ATDET1 AT3G20010 CYP705A20 ATAIG1 ATFKBP42 AtMYB108 AT3G07790 ATMSRB1 GLX2-1 ATQSOX1 ELF7 NF-YA7 AtXRN3 AT2G21385 ATRBOHB AT1G76970 AT2G27290 OTLD1 PIP5K5 ATHB-14
GO:0046148
pigment biosynthetic process
BP8.008e-02HEMC ATH1 ATAIG1 AT2G21385
GO:0006857
oligopeptide transport
BP8.049e-02AT5G14940 AT5G11570
GO:0015833
peptide transport
BP8.049e-02AT5G14940 AT5G11570
GO:0010016
shoot system morphogenesis
BP8.055e-02HEMC AT5G47190 ATH1 AT2G27290 ATHB-14
GO:0045892
negative regulation of transcription, DN...
BP8.055e-02AT5G58800 AT3G20010 NF-YA7 AtXRN3 OTLD1
GO:1902679
negative regulation of RNA biosynthetic ...
BP8.055e-02AT5G58800 AT3G20010 NF-YA7 AtXRN3 OTLD1
GO:1903507
negative regulation of nucleic acid-temp...
BP8.055e-02AT5G58800 AT3G20010 NF-YA7 AtXRN3 OTLD1