GOID TERM ONTOLOGY pValue Genes GO:0019684 photosynthesis, light reaction BP 0.000224514403638994 ORF31//PSBB//PSBN//PSBD//YCF10//ATPA//AT5G19940//AT5G52780//ATPRFB//PTAC16//PORB//PETE1//LPA1//NDH-O//APG2//PSAE-2//LHCB4.3 GO:0006354 DNA-templated transcription, elongation BP 0.00142552243308438 ORF31//PSBB//PSBN//PSBD//YCF10//ATPA//EMB2289//SCY1 GO:0009887 organ morphogenesis BP 0.00152679965790343 AT1G67690//CSK//AIL5//ATPRFB//AT5G24350//AtMYB3R4//CBB3//ATHB-8//AT4G28010//PORB//HST//ARK3//ATCEL2//AT1G79420//DOT1//LAX2//PIN6 GO:0015979 photosynthesis BP 0.00172956615024184 ORF31//PSBB//PSBN//PSBD//YCF10//ATPA//CSK//AT5G19940//AT5G52780//ATPRFB//PTAC16//PORB//PETE1//LPA1//NDH-O//APG2//PSAE-2//LHCB4.3 GO:0034637 cellular carbohydrate biosynthetic proce... BP 0.00232375064877905 AT4G36530//AT5G58520//AT4G33500//PORB//AT4G27435//AT3G18500//VTC4//AT1G66430//ATFT4//PGM2//ATCTL1//AT1G79620//APG2//ATKDSA2//IMPL1//ATSAC1//AT2G23390 GO:0010155 regulation of proton transport BP 0.00265474128390226 CSK//AT5G52780//AT5G44680//AT4G33500//NDH-O//AT2G23390 GO:0006091 generation of precursor metabolites and ... BP 0.00393439541669438 ORF31//PSBB//PSBN//PSBD//YCF10//ATPA//AT5G19940//AT5G52780//ATPRFB//PTAC16//PORB//AT1G66430//ATCTL1//PETE1//LPA1//NDH-O//APG2//PSAE-2//LHCB4.3 GO:0006818 hydrogen transport BP 0.00470325034284349 ATPA//CSK//AT5G52780//AT5G44680//AT4G33500//NDH-O//AT2G23390 GO:0015992 proton transport BP 0.00470325034284349 ATPA//CSK//AT5G52780//AT5G44680//AT4G33500//NDH-O//AT2G23390 GO:0005976 polysaccharide metabolic process BP 0.00499518286099101 ATPA//AT4G36530//AT5G58520//CBB3//AT4G33500//PORB//AT4G27435//QUA3//AT3G18500//ATFT4//PGM2//ATCTL1//AT1G79620//APG2//ATKDSA2//IMPL1//ATXTH17//ATSAC1//AT2G23390 GO:0033692 cellular polysaccharide biosynthetic pro... BP 0.00512011394805084 AT4G36530//AT5G58520//AT4G33500//PORB//AT4G27435//AT3G18500//ATFT4//PGM2//ATCTL1//AT1G79620//APG2//ATKDSA2//IMPL1//ATSAC1//AT2G23390 GO:0006812 cation transport BP 0.0053559644190346 ATPA//CSK//AT5G19940//AT5G52780//AT5G44680//AT4G33500//AtNIP5;1//GLB1//AT3G24450//SKOR//AT3G02250//ATCTL1//ATKEA1//PETE1//NDH-O//ATRBOHB//PSAE-2//AT2G23390//ATHMA4 GO:0044264 cellular polysaccharide metabolic proces... BP 0.00623189303164055 ATPA//AT4G36530//AT5G58520//AT4G33500//PORB//AT4G27435//AT3G18500//ATFT4//PGM2//ATCTL1//AT1G79620//APG2//ATKDSA2//IMPL1//ATXTH17//ATSAC1//AT2G23390 GO:0006468 protein phosphorylation BP 0.0063096795602457 CSK//HSL2//IRE//AT5G58520//AT5G52780//AT5G44680//SnRK1.3//PR5K//AT5G01020//AT3G57830//AT3G57720//AT4G33500//AT4G31250//AT3G17750//AtNIK2//AT1G49180//AT1G79620//NDH-O//CKS1//AT2G43230//AT2G23390//AT2G43930//AT2G02780 GO:0015672 monovalent inorganic cation transport BP 0.00844848019931422 ATPA//CSK//AT5G52780//AT5G44680//AT4G33500//SKOR//ATKEA1//NDH-O//AT2G23390 GO:1901137 carbohydrate derivative biosynthetic pro... BP 0.00902977564500884 ATPA//AT5G19940//ATUSP//AT5G24350//PTAC16//AT4G13840//VTC4//AT3G02250//ATFT4//ATCTL1//ATKDSA2//EMB2289//ATSAC1//ATHMA4 GO:0044262 cellular carbohydrate metabolic process BP 0.00967082231585494 ATPA//AT4G36530//AT5G58520//AT4G33500//PORB//AT4G27435//AT3G18500//VTC4//AT1G66430//ATFT4//PGM2//ATCTL1//AT1G79620//APG2//ATKDSA2//IMPL1//ATXTH17//ATSAC1//AT2G23390 GO:0048507 meristem development BP 0.0100258882815768 GIL1//AIL5//ATHB-8//DCAF1//FEY//AT3G02250//ATCTL1//SOL1//ATCEL2//AT1G78060//AT1G62770//AT1G79420//LAX2//PIN6 GO:0007389 pattern specification process BP 0.0101388409689247 AIL5//ATHB-8//DCAF1//HST//ARK3//ATCTL1//ATCEL2//AT1G79420//DOT1//LAX2//PIN6 GO:0016310 phosphorylation BP 0.0102132434077261 CSK//HSL2//IRE//AT5G58520//AT5G52780//AT5G44680//SnRK1.3//PR5K//AT5G01020//AT3G57830//AT3G57720//AT4G33500//AT4G31250//AT3G17750//AtNIK2//VTC4//AT1G49180//AT1G79620//NDH-O//IMPL1//CKS1//AT2G43230//AT2G23390//AT2G43930//AT2G02780 GO:0000271 polysaccharide biosynthetic process BP 0.0108067270480631 AT4G36530//AT5G58520//CBB3//AT4G33500//PORB//AT4G27435//AT3G18500//ATFT4//PGM2//ATCTL1//AT1G79620//APG2//ATKDSA2//IMPL1//ATSAC1//AT2G23390 GO:0048825 cotyledon development BP 0.0109629205279964 DCAF1//CRF2//DOT1//LAX2 GO:0032204 regulation of telomere maintenance BP 0.0116710571537328 ATMSH4//AT3G48210//ATPOT1 GO:0009886 post-embryonic morphogenesis BP 0.0116800834976122 AT1G67690//IAA28//HSL2//AtMYB3R4//CBB3//PTAC16//AT4G28010//ARK3//AT1G35420//ATCEL2//AT1G79420//DOT1//LAX2//PIN6 GO:0046777 protein autophosphorylation BP 0.0118332061987474 CSK//AT5G52780//AT5G44680//AT4G33500//NDH-O//AT2G23390 GO:0043269 regulation of ion transport BP 0.0124743357133075 CSK//AT5G52780//AT5G44680//AT4G33500//NDH-O//AT2G23390 GO:0010051 xylem and phloem pattern formation BP 0.0127816549654702 ARK3//ATCEL2//AT1G79420//DOT1//LAX2 GO:0032844 regulation of homeostatic process BP 0.0132089898408199 ATMSH4//AT3G48210//ATPOT1 GO:0006796 phosphate-containing compound metabolic ... BP 0.0136011076744142 ATPA//GPDHC1//CSK//AT5G19940//HSL2//IRE//AT5G58520//ATUSP//AT5G52780//AT5G44680//SnRK1.3//PR5K//ATPRFB//AT5G01020//AT3G57830//AT3G57720//PTAC16//PIS2//AT4G33500//AT4G31250//GLB1//AT3G17750//AtNIK2//VTC4//PGM2//ATCDS1//AT1G49180//AT1G79620//PETE1//NDH-O//APG2//EMB2289//IMPL1//AT2G21960//CKS1//ATSAC1//At1g78690p//AT2G43230//AT2G23390//AT2G43930//AT2G02780//ATHMA4 GO:0033044 regulation of chromosome organization BP 0.013607422140961 ATMSH4//AT5G24350//AT3G48210//ATHB-8//ATPOT1 GO:1901659 glycosyl compound biosynthetic process BP 0.013638872966976 ATPA//AT5G19940//PTAC16//AT4G13840//VTC4//AT3G02250//ATCTL1//ATHMA4 GO:0022622 root system development BP 0.0145527524128011 IAA18//IAA28//HSL2//AIL5//ABIL3//CBB3//ATHB-8//CRF2//HST//ATCTL1//SOL1//LAX2//ATSAC1//AT2G45750 GO:0048364 root development BP 0.0145527524128011 IAA18//IAA28//HSL2//AIL5//ABIL3//CBB3//ATHB-8//CRF2//HST//ATCTL1//SOL1//LAX2//ATSAC1//AT2G45750 GO:0000723 telomere maintenance BP 0.0148569952538328 ATMSH4//AT3G48210//ATPOT1 GO:0032200 telomere organization BP 0.0148569952538328 ATMSH4//AT3G48210//ATPOT1 GO:0006811 ion transport BP 0.0148763131862388 ATPA//CSK//AT5G19940//AT5G52780//AT5G44680//AT4G33500//AtNIP5;1//GLB1//AT3G24450//SKOR//AT3G02250//ATCTL1//ATKEA1//PETE1//NDH-O//LAX2//ATRBOHB//PSAE-2//AT2G23390//AT2G43930//ATHMA4 GO:0048513 organ development BP 0.0165212505382588 AT1G67690//CSK//IAA18//IAA28//HSL2//GIL1//AIL5//ATPRFB//AT5G24350//ABIL3//AtMYB3R4//CBB3//ATHB-8//DCAF1//AT4G28010//PORB//FEY//CRF2//HST//AT3G02250//ARK3//ATCTL1//SOL1//ATCEL2//AT1G78060//AT1G62770//AT1G79420//DOT1//LAX2//ATSAC1//PIN6//AT2G45750 GO:0060249 anatomical structure homeostasis BP 0.0166159676064914 ATMSH4//AT3G48210//ATPOT1 GO:0003002 regionalization BP 0.0170729441055953 AIL5//ATHB-8//HST//ARK3//ATCEL2//AT1G79420//DOT1//LAX2 GO:0071472 cellular response to salt stress BP 0.0190615915230287 CSD3//AtSAP10 GO:0007062 sister chromatid cohesion BP 0.0193225468387684 ATMSH4//AT3G48210//ATHB-8//DCAF1//AT2G45700 GO:0048449 floral organ formation BP 0.0193768501053713 AT1G67690//AtMYB3R4//CBB3//AT4G28010//ATCEL2//PIN6 GO:0044550 secondary metabolite biosynthetic proces... BP 0.0196836916809376 AT5G19940//AT5G66390//ATCHS//PTAC16//AT4G13840//VTC4//AT3G02250//ATCTL1 GO:0007059 chromosome segregation BP 0.0202770054048237 AT1G67690//ATMSH4//AT3G48210//ATHB-8//DCAF1//AT2G45700 GO:0016051 carbohydrate biosynthetic process BP 0.0211637274941559 AT4G36530//AT5G58520//CBB3//AT4G33500//PORB//AT4G27435//ATSUMO1//AT3G18500//VTC4//AT1G66430//ATFT4//PGM2//ATCTL1//AT1G79620//APG2//ATKDSA2//IMPL1//ATSAC1//AT2G23390 GO:0016144 S-glycoside biosynthetic process BP 0.0212051896533598 AT5G19940//PTAC16//AT4G13840//VTC4//AT3G02250//ATCTL1 GO:0019758 glycosinolate biosynthetic process BP 0.0212051896533598 AT5G19940//PTAC16//AT4G13840//VTC4//AT3G02250//ATCTL1 GO:0019761 glucosinolate biosynthetic process BP 0.0212051896533598 AT5G19940//PTAC16//AT4G13840//VTC4//AT3G02250//ATCTL1 GO:0043623 cellular protein complex assembly BP 0.0217307422393011 PSBB//PSBN//PSBD//RUG3//GIL1//AT5G52780//ATPRFB//AT5G24350//ATHB-8//SCPL27//TUA2//LPA1//NDH-O//APG2//ATSAC1 GO:0042180 cellular ketone metabolic process BP 0.0221617540492492 AT1G67690//ATCHS//GLB1//VTC4//ATCTL1//IMPL1 GO:0009653 anatomical structure morphogenesis BP 0.0233367758342945 AT1G67690//CSK//IAA28//HSL2//IRE//AIL5//ATPRFB//AT5G24350//ABIL3//AtMYB3R4//CBB3//PTAC16//ATHB-8//DCAF1//AT4G28010//PORB//HST//ARK3//AT1G35420//CCRL6//ATCTL1//SOL1//ATCEL2//AT1G17200//AT1G62770//ATKDSA2//AT1G79420//DOT1//LAX2//ATSAC1//PIN6//AT2G45750 GO:0042592 homeostatic process BP 0.0236969557683937 ATMSH4//AT5G19940//SnRK1.3//CBB3//AT3G48210//APRL5//PGM2//PETE1//ATPOT1//PSAE-2//ATHMA4 GO:0009888 tissue development BP 0.0243050560790331 GIL1//AIL5//AT5G24350//ABIL3//CBB3//PTAC16//ATHB-8//DCAF1//FEY//AT3G02250//AT1G35420//ATCTL1//SOL1//ATCEL2//AT1G78060//AT1G62770//CYCB3;1//AT1G79420//DOT1//LAX2//CKS1//ATSAC1//PIN6//AT2G45750 GO:0032879 regulation of localization BP 0.024711540622039 CSK//AT5G52780//AT5G44680//AT5G01020//AT4G33500//NDH-O//AT2G23390 GO:0019252 starch biosynthetic process BP 0.0249181587746474 AT4G36530//AT4G33500//PORB//AT3G18500//PGM2//APG2//IMPL1//AT2G23390 GO:0051049 regulation of transport BP 0.025205093469077 CSK//AT5G52780//AT5G44680//AT4G33500//NDH-O//AT2G23390 GO:0006793 phosphorus metabolic process BP 0.0252563172522113 ATPA//GPDHC1//CSK//AT5G19940//HSL2//IRE//AT5G58520//ATUSP//AT5G52780//AT5G44680//SnRK1.3//PR5K//ATPRFB//AT5G01020//AT3G57830//AT3G57720//PTAC16//PIS2//AT4G33500//AT4G31250//GLB1//AT3G17750//AtNIK2//VTC4//PGM2//ATCDS1//AT1G49180//AT1G79620//PETE1//NDH-O//APG2//EMB2289//IMPL1//AT2G21960//CKS1//ATSAC1//At1g78690p//AT2G43230//AT2G23390//AT2G43930//AT2G02780//ATHMA4 GO:0070838 divalent metal ion transport BP 0.0256292147880892 AT5G19940//GLB1//AT3G02250//ATCTL1//PETE1//PSAE-2//ATHMA4 GO:0000023 maltose metabolic process BP 0.0265699718072138 AT4G36530//AT4G33500//AT3G18500//PGM2//APG2//IMPL1//AT2G23390 GO:0065003 macromolecular complex assembly BP 0.0270836659504644 PSBB//PSBN//PSBD//AT1G67690//RUG3//GIL1//AT5G52780//ATPRFB//AT5G24350//AtMYB3R4//ATHB-8//SCPL27//TUA2//LPA1//NDH-O//APG2//ATSAC1 GO:0072511 divalent inorganic cation transport BP 0.0275340450144025 AT5G19940//GLB1//AT3G02250//ATCTL1//PETE1//PSAE-2//ATHMA4 GO:0007167 enzyme linked receptor protein signaling... BP 0.0277506860269086 HSL2//AT3G57830//AT4G31250//AT1G79620//AT2G02780 GO:0007169 transmembrane receptor protein tyrosine ... BP 0.0277506860269086 HSL2//AT3G57830//AT4G31250//AT1G79620//AT2G02780 GO:0010224 response to UV-B BP 0.0282336788253412 CSD3//ATCHS//CBB3//AT1G51400 GO:0009314 response to radiation BP 0.0294818843023406 CSK//ATMSH4//GIL1//AIL5//AT5G44680//AT5G19150//CSD3//ATCHS//ANN6//CBB3//AT3G48210//PTAC16//AT4G33500//DCAF1//AtSAP10//GLB1//AT3G22104//ATCTL1//AtMYB60//AT1G51400//LHCB4.3//AT2G23390 GO:0006464 cellular protein modification process BP 0.0297460638107077 AT1G67690//CSK//AT5G19940//DHAR3//HSL2//IRE//AT5G58520//AIL5//AT5G52780//AT5G44680//SnRK1.3//PR5K//ATPRFB//AT5G24350//AT5G01020//AT3G57830//AT3G57720//SQS2//AT4G33500//DCAF1//AT4G31250//ATSUMO1//FLA3//AT3G17750//AtNIK2//ATFT4//AT1G49180//AT1G79620//PETE1//NDH-O//APG2//CKS1//ATSAC1//AT2G43230//AT2G23390//AT2G43930//AT2G02780 GO:0036211 protein modification process BP 0.0297460638107077 AT1G67690//CSK//AT5G19940//DHAR3//HSL2//IRE//AT5G58520//AIL5//AT5G52780//AT5G44680//SnRK1.3//PR5K//ATPRFB//AT5G24350//AT5G01020//AT3G57830//AT3G57720//SQS2//AT4G33500//DCAF1//AT4G31250//ATSUMO1//FLA3//AT3G17750//AtNIK2//ATFT4//AT1G49180//AT1G79620//PETE1//NDH-O//APG2//CKS1//ATSAC1//AT2G43230//AT2G23390//AT2G43930//AT2G02780 GO:0071470 cellular response to osmotic stress BP 0.0316515335247423 CSD3//AtSAP10 GO:0009637 response to blue light BP 0.0321009255853175 CSK//AT5G44680//PTAC16//AT4G33500//LHCB4.3//AT2G23390 GO:0005984 disaccharide metabolic process BP 0.0349978768810208 AT4G36530//AT4G33500//AT3G18500//AT1G66430//PGM2//APG2//IMPL1//AT2G23390 GO:0044272 sulfur compound biosynthetic process BP 0.0350781538681166 AT5G19940//AT5G01020//PTAC16//PORB//AT4G13840//GLB1//AT3G30300//VTC4//AT3G02250//AT1G35420//AT1G66430//ATCTL1//PETE1 GO:0006284 base-excision repair BP 0.0364040002898928 AT5G44680//ATNTH2 GO:0046834 lipid phosphorylation BP 0.0364040002898928 VTC4//IMPL1 GO:0046854 phosphatidylinositol phosphorylation BP 0.0364040002898928 VTC4//IMPL1 GO:0006767 water-soluble vitamin metabolic process BP 0.0374839769451549 AT5G08340//VTC4//ATKDSA2 GO:0042364 water-soluble vitamin biosynthetic proce... BP 0.0374839769451549 AT5G08340//VTC4//ATKDSA2 GO:0022607 cellular component assembly BP 0.0379248312762167 PSBB//PSBN//PSBD//AT1G67690//ATMSH4//RUG3//GIL1//AT5G52780//ATPRFB//AT5G24350//AtMYB3R4//CBB3//ATHB-8//SCPL27//CCRL6//TUA2//LPA1//NDH-O//APG2//ATSAC1 GO:0007129 synapsis BP 0.0403572631013829 AT1G67690//ATMSH4//AT3G48210 GO:0045143 homologous chromosome segregation BP 0.0403572631013829 AT1G67690//ATMSH4//AT3G48210 GO:0070192 chromosome organization involved in meio... BP 0.0403572631013829 AT1G67690//ATMSH4//AT3G48210 GO:0010073 meristem maintenance BP 0.0409671188916292 GIL1//FEY//AT3G02250//ATCTL1//SOL1//AT1G78060//AT1G79420//LAX2//PIN6 GO:0044036 cell wall macromolecule metabolic proces... BP 0.0415213437233942 AT5G58520//ATHB-8//AT4G27435//ATCTL1//AT1G79620//ATKDSA2//ATXTH17//ATSAC1 GO:0016143 S-glycoside metabolic process BP 0.0415732099511979 AT5G19940//PTAC16//AT4G13840//VTC4//AT3G02250//ATCTL1 GO:0019757 glycosinolate metabolic process BP 0.0415732099511979 AT5G19940//PTAC16//AT4G13840//VTC4//AT3G02250//ATCTL1 GO:0019760 glucosinolate metabolic process BP 0.0415732099511979 AT5G19940//PTAC16//AT4G13840//VTC4//AT3G02250//ATCTL1 GO:0006461 protein complex assembly BP 0.042562606074274 PSBB//PSBN//PSBD//RUG3//GIL1//AT5G52780//ATPRFB//AT5G24350//AtMYB3R4//ATHB-8//SCPL27//TUA2//LPA1//NDH-O//APG2//ATSAC1 GO:0070271 protein complex biogenesis BP 0.0432714598791749 PSBB//PSBN//PSBD//RUG3//GIL1//AT5G52780//ATPRFB//AT5G24350//AtMYB3R4//ATHB-8//SCPL27//TUA2//LPA1//NDH-O//APG2//ATSAC1 GO:0046488 phosphatidylinositol metabolic process BP 0.0433419577670429 PIS2//VTC4//IMPL1//CKS1//ATSAC1 GO:0007166 cell surface receptor signaling pathway BP 0.0451397226988031 HSL2//AT3G57830//AT4G31250//AT1G79620//AT2G02780 GO:0034622 cellular macromolecular complex assembly BP 0.047492685080191 PSBB//PSBN//PSBD//RUG3//GIL1//AT5G52780//ATPRFB//AT5G24350//ATHB-8//SCPL27//TUA2//LPA1//NDH-O//APG2//ATSAC1 GO:0009250 glucan biosynthetic process BP 0.0475227284654194 AT4G36530//AT4G33500//PORB//AT3G18500//PGM2//ATCTL1//APG2//IMPL1//AT2G23390 GO:0009311 oligosaccharide metabolic process BP 0.0475394480595612 AT4G36530//AT4G33500//AT3G18500//AT1G66430//PGM2//APG2//IMPL1//AT2G23390 GO:0010014 meristem initiation BP 0.0477015174238395 ATHB-8//DCAF1//ATCEL2//AT1G62770//AT1G79420//PIN6 GO:0044085 cellular component biogenesis BP 0.0490520214263132 PSBB//PSBN//PSBD//ATPA//AT1G67690//ATMSH4//RUG3//GIL1//AT5G58520//AT5G52780//ATPRFB//AT5G24350//AtMYB3R4//CBB3//PTAC16//ATHB-8//AT4G27435//SCPL27//CCRL6//AT1G79620//TUA2//LPA1//NDH-O//APG2//ATKDSA2//ATSAC1//LHCB4.3 GO:0009933 meristem structural organization BP 0.0505463606244547 AIL5//ATHB-8//DCAF1//ATCEL2//AT1G62770//AT1G79420//PIN6 GO:0006790 sulfur compound metabolic process BP 0.0507510290780631 AT5G19940//AT5G01020//PTAC16//PORB//AT4G13840//GLB1//AT3G30300//VTC4//AT3G02250//APK3//AT1G35420//AT1G66430//ATCTL1//PETE1//IMPL1 GO:0009855 determination of bilateral symmetry BP 0.0507975483012735 ATHB-8//ARK3//ATCEL2//AT1G79420//PIN6 GO:0006312 mitotic recombination BP 0.0521361537089926 ATMSH4//AT3G48210 GO:0048598 embryonic morphogenesis BP 0.0521361537089926 DOT1//LAX2 GO:0052546 cell wall pectin metabolic process BP 0.0521361537089926 QUA3//ATKDSA2