GOID TERM ONTOLOGY pValue Genes GO:0000956 nuclear-transcribed mRNA catabolic proce... BP 0.00114871613305178 AT5G59830//AtLHP1//AT3G17740//AT1G50410 GO:0006402 mRNA catabolic process BP 0.00114871613305178 AT5G59830//AtLHP1//AT3G17740//AT1G50410 GO:0006401 RNA catabolic process BP 0.00137782549563167 AT5G59830//AtLHP1//AT3G17740//AT1G50410 GO:0034655 nucleobase-containing compound catabolic... BP 0.00163714749495201 AT5G59830//AtLHP1//AT3G17740//AT1G50410 GO:0044270 cellular nitrogen compound catabolic pro... BP 0.00284195515486697 ACD1//AT5G59830//AtLHP1//AT3G17740//AT1G50410 GO:0046700 heterocycle catabolic process BP 0.00291543645884587 ACD1//AT5G59830//AtLHP1//AT3G17740//AT1G50410 GO:0019439 aromatic compound catabolic process BP 0.00299028841725809 ACD1//AT5G59830//AtLHP1//AT3G17740//AT1G50410 GO:1901361 organic cyclic compound catabolic proces... BP 0.00322321598543695 ACD1//AT5G59830//AtLHP1//AT3G17740//AT1G50410 GO:0044265 cellular macromolecule catabolic process BP 0.00324630773513257 AT5G59830//ACS//AtLHP1//SGT1A//AT3G17740//AT1G50410 GO:0009057 macromolecule catabolic process BP 0.00480075500016988 AT5G59830//ACS//AtLHP1//SGT1A//AT3G17740//AT1G50410 GO:0050789 regulation of biological process BP 0.00496075272171485 ACD1//ATRAD21.3//GATA5//ATCOL5//BEL1//ACS//ATCDPK9//AtLHP1//RVE1//RBK1//BPG2//AT3G48210//ATCIPK6//AT4G30390//AT4G27250//SGT1A//AT4G03156//AT3G17740//AT1G68780//AT1G63870//AT1G53420//AT1G30455//ATBPC1 GO:0051716 cellular response to stimulus BP 0.00505826363484548 ATCOL5//BEL1//ATCDPK9//RVE1//RBK1//BPG2//AT3G48210//ATCIPK6//AT4G30390//AT4G27250//SGT1A//AT4G05240//AT4G03156//AT1G68780//AT1G63870//AT1G53420 GO:1901575 organic substance catabolic process BP 0.00584057585905029 ACD1//AT5G59830//ACS//AtLHP1//AT4G27250//SGT1A//AT3G14075//AT3G17740//AT1G50410 GO:0050794 regulation of cellular process BP 0.00589299611794201 ACD1//ATRAD21.3//GATA5//ATCOL5//BEL1//ATCDPK9//AtLHP1//RVE1//RBK1//BPG2//AT3G48210//ATCIPK6//AT4G30390//AT4G27250//AT4G03156//AT3G17740//AT1G68780//AT1G63870//AT1G53420//AT1G30455//ATBPC1 GO:0010048 vernalization response BP 0.0062507608960249 AtLHP1//AT4G03930//AT3G17740 GO:0007165 signal transduction BP 0.00638480542943693 BEL1//ATCDPK9//RVE1//RBK1//BPG2//ATCIPK6//AT4G30390//AT4G27250//AT4G03156//AT1G68780//AT1G63870//AT1G53420 GO:0016071 mRNA metabolic process BP 0.00658820837040645 AT5G59830//AtLHP1//BPG2//AT3G17740//AT1G50410 GO:0019722 calcium-mediated signaling BP 0.00841269290270832 RBK1//ATCIPK6 GO:0023052 signaling BP 0.00893130443460928 BEL1//ATCDPK9//RVE1//RBK1//BPG2//ATCIPK6//AT4G30390//AT4G27250//AT4G03156//AT1G68780//AT1G63870//AT1G53420 GO:0044700 single organism signaling BP 0.00893130443460928 BEL1//ATCDPK9//RVE1//RBK1//BPG2//ATCIPK6//AT4G30390//AT4G27250//AT4G03156//AT1G68780//AT1G63870//AT1G53420 GO:0032870 cellular response to hormone stimulus BP 0.00961119984487588 ATCDPK9//RVE1//RBK1//BPG2//AT4G30390//AT4G27250//SGT1A GO:0071495 cellular response to endogenous stimulus BP 0.0099783050660043 ATCDPK9//RVE1//RBK1//BPG2//AT4G30390//AT4G27250//SGT1A GO:0007154 cell communication BP 0.010276043088991 ATCOL5//BEL1//ATCDPK9//RVE1//RBK1//BPG2//ATCIPK6//AT4G30390//AT4G27250//AT4G03156//AT1G68780//AT1G63870//AT1G53420 GO:0010413 glucuronoxylan metabolic process BP 0.010329321116233 AT5G59830//EMB1895//AT1G50410 GO:0045491 xylan metabolic process BP 0.010329321116233 AT5G59830//EMB1895//AT1G50410 GO:0045492 xylan biosynthetic process BP 0.010329321116233 AT5G59830//EMB1895//AT1G50410 GO:0019932 second-messenger-mediated signaling BP 0.0105810381780702 RBK1//ATCIPK6 GO:0010410 hemicellulose metabolic process BP 0.0106937973757379 AT5G59830//EMB1895//AT1G50410 GO:0044038 cell wall macromolecule biosynthetic pro... BP 0.0114450071994609 AT5G59830//EMB1895//AT1G50410 GO:0048573 photoperiodism, flowering BP 0.0114450071994609 AT5G59830//AtLHP1//RVE1 GO:0070589 cellular component macromolecule biosynt... BP 0.0114450071994609 AT5G59830//EMB1895//AT1G50410 GO:0070592 cell wall polysaccharide biosynthetic pr... BP 0.0114450071994609 AT5G59830//EMB1895//AT1G50410 GO:0009648 photoperiodism BP 0.0126278558093124 AT5G59830//AtLHP1//RVE1 GO:0065007 biological regulation BP 0.0132175559371028 ACD1//ATRAD21.3//GATA5//ATCOL5//BEL1//ACS//ATCDPK9//AtLHP1//RVE1//RBK1//BPG2//AT3G48210//ATCIPK6//AT4G30390//AT4G27250//SGT1A//AT4G03156//AT3G17740//AT1G68780//AT1G63870//AT1G53420//AT1G30455//ATBPC1 GO:0003006 developmental process involved in reprod... BP 0.0147361991431792 ACD1//AT5G59830//BEL1//AtLHP1//RVE1//AT3G48210//AT3G45810//AT4G27250//SGT1A//EMB1895//AT1G68780 GO:0050896 response to stimulus BP 0.0157428934726177 ACD1//AT5G59830//ATCOL5//BEL1//ACS//ATCDPK9//AtLHP1//RVE1//RBK1//BPG2//AT3G48210//ATCIPK6//AT4G30390//AT4G27250//SGT1A//AT4G05240//AT4G03930//AT4G03156//AT3G17740//AT3G06670//AT1G68780//AT1G63870//AT1G53420//ATBPC1 GO:0070887 cellular response to chemical stimulus BP 0.0183388268579168 ATCOL5//BEL1//ATCDPK9//RVE1//RBK1//BPG2//AT4G30390//AT4G27250//SGT1A GO:0010383 cell wall polysaccharide metabolic proce... BP 0.0185433959077116 AT5G59830//EMB1895//AT1G50410 GO:0071554 cell wall organization or biogenesis BP 0.0213427264304834 AT5G59830//AT3G45810//AT3G42160//EMB1895//AT4G03930//AT1G50410 GO:0022414 reproductive process BP 0.0215034772326612 ACD1//AT5G59830//BEL1//AtLHP1//RVE1//AT3G48210//AT3G45810//AT4G27250//SGT1A//EMB1895//AT1G68780 GO:0009056 catabolic process BP 0.0223512287601474 ACD1//AT5G59830//ACS//AtLHP1//AT4G27250//SGT1A//AT3G14075//AT3G17740//AT1G50410 GO:0071365 cellular response to auxin stimulus BP 0.0256672529186204 RVE1//SGT1A GO:0048608 reproductive structure development BP 0.0257565450274658 ACD1//AT5G59830//BEL1//AtLHP1//RVE1//AT4G27250//SGT1A//EMB1895//AT1G68780 GO:0061458 reproductive system development BP 0.0257565450274658 ACD1//AT5G59830//BEL1//AtLHP1//RVE1//AT4G27250//SGT1A//EMB1895//AT1G68780 GO:0009723 response to ethylene BP 0.0265490403679654 RVE1//RBK1//AT4G30390//ATBPC1 GO:0044248 cellular catabolic process BP 0.0282044013337417 ACD1//AT5G59830//ACS//AtLHP1//AT4G27250//SGT1A//AT3G17740//AT1G50410 GO:0071310 cellular response to organic substance BP 0.0286740690903149 BEL1//ATCDPK9//RVE1//RBK1//BPG2//AT4G30390//AT4G27250//SGT1A GO:0007346 regulation of mitotic cell cycle BP 0.0339398564261184 AtLHP1//AT3G17740 GO:0042546 cell wall biogenesis BP 0.0379184941948727 AT5G59830//EMB1895//AT1G50410 GO:0010228 vegetative to reproductive phase transit... BP 0.0382459775646231 ACD1//AT5G59830//AtLHP1//RVE1 GO:0044702 single organism reproductive process BP 0.0406311613631798 ACD1//BEL1//AtLHP1//AT3G48210//AT3G45810//AT4G27250//SGT1A//EMB1895//AT1G68780 GO:0044036 cell wall macromolecule metabolic proces... BP 0.0417346217107187 AT5G59830//EMB1895//AT1G50410 GO:0035670 plant-type ovary development BP 0.0530792087647635 ACD1//BEL1 GO:0048481 ovule development BP 0.0530792087647635 ACD1//BEL1 GO:0006346 methylation-dependent chromatin silencin... BP 0.0560671969125132 ATRAD21.3//AtLHP1 GO:0048285 organelle fission BP 0.0570080087431113 ATRAD21.3//MSL2//AT3G48210 GO:0090304 nucleic acid metabolic process BP 0.0597060614915246 ACD1//ATRAD21.3//GATA5//AT5G59830//ATCOL5//BEL1//AtLHP1//RVE1//BPG2//AT3G48210//AT4G05240//AT3G17740//AT1G30455//AT1G50410//ATBPC1 GO:0009725 response to hormone BP 0.0624501330595016 ATCDPK9//RVE1//RBK1//BPG2//AT4G30390//AT4G27250//SGT1A//ATBPC1 GO:0042545 cell wall modification BP 0.0626172869712839 AT3G45810//AT3G42160//AT4G03930 GO:0009814 defense response, incompatible interacti... BP 0.0693143162546529 ACD1//BEL1//RBK1//SGT1A GO:0002831 regulation of response to biotic stimulu... BP 0.0730173229566438 211_ GO:0044260 cellular macromolecule metabolic process BP 0.0761995670289912 ACD1//ATRAD21.3//GATA5//AT5G59830//ATCOL5//BEL1//ACS//ATCDPK9//AtLHP1//RVE1//RBK1//BPG2//AT3G48210//ATCIPK6//SGT1A//EMB1895//AT4G05240//AT3G17740//AT1G53420//APK1//AT1G30455//AT1G50410//ATBPC1 GO:0010540 basipetal auxin transport BP 0.0784126386469652 550_ GO:0016444 somatic cell DNA recombination BP 0.0784126386469652 351_ GO:0007062 sister chromatid cohesion BP 0.0802173882225875 ATRAD21.3//AT3G48210 GO:0009755 hormone-mediated signaling pathway BP 0.0817357875150855 ATCDPK9//RVE1//BPG2//AT4G30390//AT4G27250 GO:0009739 response to gibberellin BP 0.0836480394122151 RVE1//AT4G27250 GO:0032101 regulation of response to external stimu... BP 0.0837772024773005 211_ GO:0048574 long-day photoperiodism, flowering BP 0.0837772024773005 099_ GO:0019219 regulation of nucleobase-containing comp... BP 0.0872659620338473 ACD1//ATRAD21.3//GATA5//ATCOL5//BEL1//AtLHP1//RVE1//AT3G48210//AT1G30455//ATBPC1 GO:0032502 developmental process BP 0.0880250838589442 ACD1//AT5G59830//BEL1//AtLHP1//RVE1//BPG2//AT3G48210//AT3G45810//ATCIPK6//AT4G27250//SGT1A//EMB1895//AT1G68780//ATBPC1 GO:0006289 nucleotide-excision repair BP 0.0891111860165478 269_ GO:0048571 long-day photoperiodism BP 0.0891111860165478 099_ GO:0016070 RNA metabolic process BP 0.0909742543835043 ACD1//ATRAD21.3//GATA5//AT5G59830//ATCOL5//BEL1//AtLHP1//RVE1//BPG2//AT3G17740//AT1G30455//AT1G50410//ATBPC1 GO:0009791 post-embryonic development BP 0.0927086552123325 ACD1//AT5G59830//BEL1//AtLHP1//RVE1//AT4G27250//SGT1A//EMB1895//AT1G68780 GO:0051171 regulation of nitrogen compound metaboli... BP 0.0942513914072017 ACD1//ATRAD21.3//GATA5//ATCOL5//BEL1//AtLHP1//RVE1//AT3G48210//AT1G30455//ATBPC1 GO:0009742 brassinosteroid mediated signaling pathw... BP 0.0944147598970915 669_ GO:0043401 steroid hormone mediated signaling pathw... BP 0.0944147598970915 669_ GO:0048545 response to steroid hormone BP 0.0944147598970915 669_ GO:0071367 cellular response to brassinosteroid sti... BP 0.0944147598970915 669_ GO:0071383 cellular response to steroid hormone sti... BP 0.0944147598970915 669_ GO:0048316 seed development BP 0.0964600114361454 ACD1//AT4G27250//SGT1A//EMB1895 GO:0006950 response to stress BP 0.0997698526765061 ACD1//ATCOL5//BEL1//ACS//AtLHP1//RVE1//RBK1//AT3G48210//ATCIPK6//SGT1A//AT4G05240//AT4G03930//AT3G17740//AT1G63870 GO:0033692 cellular polysaccharide biosynthetic pro... BP 0.10246013109312 AT5G59830//EMB1895//AT1G50410 GO:0048440 carpel development BP 0.103278456606418 ACD1//BEL1 GO:0016051 carbohydrate biosynthetic process BP 0.104633258126809 AT5G59830//ACS//EMB1895//AT1G50410 GO:0071396 cellular response to lipid BP 0.106055614740002 ATCDPK9//BPG2//AT4G27250 GO:0010154 fruit development BP 0.108366865638904 ACD1//AT4G27250//SGT1A//EMB1895 GO:0000278 mitotic cell cycle BP 0.112158790668784 ATRAD21.3//AtLHP1//AT3G17740 GO:0006139 nucleobase-containing compound metabolic... BP 0.112843774485867 ACD1//ATRAD21.3//GATA5//AT5G59830//ATCOL5//BEL1//AtLHP1//RVE1//BPG2//AT3G48210//AT4G05240//AT3G17740//AT1G30455//AT1G50410//ATBPC1 GO:0016246 RNA interference BP 0.114473842564721 ATRAD21.3//AtLHP1 GO:0007059 chromosome segregation BP 0.116369776411572 ATRAD21.3//AT3G48210 GO:0048467 gynoecium development BP 0.116369776411572 ACD1//BEL1 GO:0035194 posttranscriptional gene silencing by RN... BP 0.120185980286439 ATRAD21.3//AtLHP1 GO:0048438 floral whorl development BP 0.120927642052754 ACD1//BEL1//AT1G68780 GO:1901701 cellular response to oxygen-containing c... BP 0.120970523941262 ATCOL5//BEL1//ATCDPK9//BPG2//AT4G27250 GO:0009719 response to endogenous stimulus BP 0.123160497182593 ATCDPK9//RVE1//RBK1//BPG2//AT4G30390//AT4G27250//SGT1A//ATBPC1 GO:0016441 posttranscriptional gene silencing BP 0.125968843473261 ATRAD21.3//AtLHP1 GO:0010016 shoot system morphogenesis BP 0.126051396856524 ACD1//AtLHP1//AT1G68780 GO:0009628 response to abiotic stimulus BP 0.126100151046216 AT5G59830//ATCOL5//AtLHP1//RVE1//RBK1//AT3G48210//ATCIPK6//AT4G03930//AT3G17740//AT3G06670