4.0:Analysis result:Information of module
Methyl Violet 0.5 uM

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0019252
starch biosynthetic process
BP5.220e-03AFP4 AT3G01660 ATSCO1 ALF1 BASS2
GO:0006569
tryptophan catabolic process
BP9.158e-03PYL1 ALF1 AtOPR3
GO:0046218
indolalkylamine catabolic process
BP9.158e-03PYL1 ALF1 AtOPR3
GO:0000271
polysaccharide biosynthetic process
BP9.862e-03AT5G12350 ATSYP41 AFP4 AT3G01660 HSL1 ATSCO1 TUB1 ALF1 BASS2
GO:0042436
indole-containing compound catabolic pro...
BP9.880e-03PYL1 ALF1 AtOPR3
GO:0009074
aromatic amino acid family catabolic pro...
BP1.142e-02PYL1 ALF1 AtOPR3
GO:0010817
regulation of hormone levels
BP1.400e-02FPS2 PYL1 HSL1 TUB1 ALF1 AT1G12080 AtOPR3
GO:0005982
starch metabolic process
BP1.486e-02AFP4 AT3G01660 ATSCO1 ALF1 BASS2
GO:0065009
regulation of molecular function
BP1.586e-02FD-GOGAT PYL1 ATSCO1 AtCCA1 BASS2
GO:0006568
tryptophan metabolic process
BP1.786e-02PYL1 ALF1 AtOPR3
GO:0006586
indolalkylamine metabolic process
BP1.786e-02PYL1 ALF1 AtOPR3
GO:0034637
cellular carbohydrate biosynthetic proce...
BP1.815e-02AT5G12350 ATSYP41 AFP4 AT3G01660 ATTPS6 ATSCO1 ALF1 BASS2
GO:0042446
hormone biosynthetic process
BP1.972e-02FPS2 PYL1 ALF1 AT1G12080 AtOPR3
GO:0016051
carbohydrate biosynthetic process
BP2.233e-02AT5G12350 ATSYP41 GAUT4 AFP4 AT3G01660 ATTPS6 HSL1 ATSCO1 TUB1 ALF1 BASS2
GO:0009684
indoleacetic acid biosynthetic process
BP2.347e-02PYL1 ALF1 AtOPR3
GO:0043085
positive regulation of catalytic activit...
BP2.347e-02FD-GOGAT ATSCO1 BASS2
GO:0044093
positive regulation of molecular functio...
BP2.347e-02FD-GOGAT ATSCO1 BASS2
GO:0009683
indoleacetic acid metabolic process
BP2.469e-02PYL1 ALF1 AtOPR3
GO:0009310
amine catabolic process
BP2.856e-02PYL1 ALF1 AtOPR3
GO:0009851
auxin biosynthetic process
BP2.856e-02PYL1 ALF1 AtOPR3
GO:0042402
cellular biogenic amine catabolic proces...
BP2.856e-02PYL1 ALF1 AtOPR3
GO:0016054
organic acid catabolic process
BP2.970e-02PYL1 CYP707A3 SDP1 AtOCT4 ALF1 AtOPR3
GO:0046395
carboxylic acid catabolic process
BP2.970e-02PYL1 CYP707A3 SDP1 AtOCT4 ALF1 AtOPR3
GO:0005984
disaccharide metabolic process
BP3.157e-02AT3G01660 ATTPS6 ATSCO1 BASS2
GO:0042445
hormone metabolic process
BP3.236e-02FPS2 PYL1 ALF1 AT1G12080 AtOPR3
GO:0009250
glucan biosynthetic process
BP3.318e-02AFP4 AT3G01660 ATSCO1 ALF1 BASS2
GO:0050790
regulation of catalytic activity
BP3.363e-02FD-GOGAT PYL1 ATSCO1 BASS2
GO:0009753
response to jasmonic acid
BP3.377e-02ATMYB44 JAZ8 AT3G16350 AtOPR3 AT2G27500 AtCCA1
GO:0009416
response to light stimulus
BP3.394e-02FWA FD-GOGAT CYP707A3 Cpn60alpha2 AT3G42860 ATSWI3B AT3G02650 ERCC1 HSL1 TUB1 AtCCA1
GO:0043933
macromolecular complex subunit organizat...
BP3.404e-02FWA HAC07 AT3G42860 ATSWI3B AT3G23740 EMB3121 AT3G02650 ERCC1 HSL1 ATSCO1 TUB1 PPR336
GO:0033692
cellular polysaccharide biosynthetic pro...
BP3.554e-02AT5G12350 ATSYP41 AFP4 AT3G01660 ATSCO1 ALF1 BASS2
GO:0042435
indole-containing compound biosynthetic ...
BP3.570e-02PYL1 ALF1 AtOPR3
GO:0048608
reproductive structure development
BP3.601e-02FWA FD-GOGAT EMB2754 HAC07 Cpn60alpha2 AT3G61410 AT3G53040 EMB1691 ATSWI3B AT3G02650 HSL1 ATSCO1 ATECP63 AtCCA1
GO:0061458
reproductive system development
BP3.601e-02FWA FD-GOGAT EMB2754 HAC07 Cpn60alpha2 AT3G61410 AT3G53040 EMB1691 ATSWI3B AT3G02650 HSL1 ATSCO1 ATECP63 AtCCA1
GO:0005976
polysaccharide metabolic process
BP3.683e-02AT5G12350 ATSYP41 AFP4 AT3G01660 HSL1 ATSCO1 TUB1 ALF1 BASS2
GO:0051276
chromosome organization
BP3.798e-02AT5G12350 HAC07 AT3G58210 AT3G42860 ATSWI3B AT3G23740 AT3G02650 PPR336
GO:0009739
response to gibberellin
BP3.878e-02ATMYB44 AT3G16350 AtCCA1
GO:0009850
auxin metabolic process
BP4.366e-02PYL1 ALF1 AtOPR3
GO:0009314
response to radiation
BP4.550e-02FWA FD-GOGAT CYP707A3 Cpn60alpha2 AT3G42860 ATSWI3B AT3G02650 ERCC1 HSL1 TUB1 AtCCA1
GO:0044710
single-organism metabolic process
BP4.620e-02AT5G12350 FPS2 FD-GOGAT EMB2754 ATSYP41 AT5G58660 HAC07 GAUT4 PYL1 CYP707A3 Cpn60alpha2 AT5G11700 SDP1 AtFAP1 AT3G58210 AT3G50010 AT3G46150 AT3G42860 AT4G31790 AT4G01910 JAZ8 AT1G66440 AtOCT4 BGAL1 AT3G23740 AT3G02650 AT3G07000 AFP4 AT3G01660 ERCC1 ATTPS6 AT1G06730 AT1G01440 HSL1 ATSCO1 TUB1 ALF1 AT1G12080 AtOPR3 AtCCA1 BASS2
GO:0048573
photoperiodism, flowering
BP4.707e-02FWA ATSWI3B AtCCA1
GO:0000724
double-strand break repair via homologou...
BP4.755e-02AT3G42860 ERCC1
GO:0000725
recombinational repair
BP4.755e-02AT3G42860 ERCC1
GO:0009072
aromatic amino acid family metabolic pro...
BP4.762e-02PYL1 AtOCT4 ALF1 AtOPR3
GO:0019321
pentose metabolic process
BP5.055e-02EMB2754 AT1G06730
GO:0042430
indole-containing compound metabolic pro...
BP5.062e-02PYL1 ALF1 AtOPR3
GO:0009311
oligosaccharide metabolic process
BP5.155e-02AT3G01660 ATTPS6 ATSCO1 BASS2
GO:0071229
cellular response to acid chemical
BP5.564e-02ATMYB44 PYL1 JAZ8 AtOCT4 AFP4 AtOPR3 AT2G27500
GO:0000023
maltose metabolic process
BP5.616e-02AT3G01660 ATSCO1 BASS2
GO:0006996
organelle organization
BP5.797e-02AT5G12350 FWA AT4G16490 FD-GOGAT EMB2754 HAC07 SDP1 AT3G58210 AT3G42860 AT4G32640 ATSWI3B AT3G23740 AT3G02650 HSL1 ATSCO1 TUB1 PPR336
GO:0009648
photoperiodism
BP5.808e-02FWA ATSWI3B AtCCA1
GO:0044723
single-organism carbohydrate metabolic p...
BP5.952e-02AT5G12350 EMB2754 ATSYP41 GAUT4 AT5G11700 AFP4 AT3G01660 ATTPS6 AT1G06730 HSL1 ATSCO1 TUB1 ALF1 BASS2
GO:1901362
organic cyclic compound biosynthetic pro...
BP6.008e-02FWA FPS2 AtIDD16 FD-GOGAT ATMYB44 AT5G58620 HAC07 PYL1 Cpn60alpha2 AT5G06770 AT3G42860 AT4G31790 AT3G27700 AT3G02650 AFP4 AT3G16350 AT1G77570 AtTLP7 ATSCO1 ALF1 AT1G12080 AtOPR3 AtCCA1
GO:0009793
embryo development ending in seed dorman...
BP6.043e-02EMB2754 Cpn60alpha2 AT3G53040 EMB1691 ATSCO1 ATECP63
GO:0034754
cellular hormone metabolic process
BP6.199e-02PYL1 ALF1 AtOPR3
GO:0009695
jasmonic acid biosynthetic process
BP6.400e-02JAZ8 ALF1 AtOPR3
GO:0009867
jasmonic acid mediated signaling pathway
BP6.438e-02ATMYB44 JAZ8 AtOPR3 AT2G27500
GO:0071395
cellular response to jasmonic acid stimu...
BP6.438e-02ATMYB44 JAZ8 AtOPR3 AT2G27500
GO:0006325
chromatin organization
BP6.565e-02HAC07 AT3G42860 ATSWI3B AT3G23740 AT3G02650 PPR336
GO:0010212
response to ionizing radiation
BP6.653e-02AT3G42860 ERCC1
GO:0044282
small molecule catabolic process
BP6.673e-02PYL1 CYP707A3 SDP1 AtOCT4 ALF1 AtOPR3
GO:0044271
cellular nitrogen compound biosynthetic ...
BP6.827e-02FWA AtIDD16 ATMYB44 AT5G58620 HAC07 PYL1 Cpn60alpha2 AT5G06770 AT3G42860 AT4G31790 AT3G27700 AT3G02650 AFP4 AT3G16350 AT1G77570 AtTLP7 ATSCO1 ALF1 AtOPR3 AtCCA1
GO:0065007
biological regulation
BP7.014e-02AT5G12350 FWA FPS2 AtIDD16 FD-GOGAT ATMYB44 AT5G58620 HAC07 AT5G46520 PYL1 AT5G06770 AT3G58210 AT3G42860 AT4G01910 ATSWI3B JAZ8 BGAL1 AT3G23740 AT3G27700 AT3G02650 AT3G07000 AFP4 AT3G16350 AT1G77570 AtTLP7 HSL1 ATSCO1 TUB1 ALF1 AT1G12080 AtOPR3 AT2G27500 AtCCA1 BASS2
GO:0010468
regulation of gene expression
BP7.102e-02FWA AtIDD16 ATMYB44 AT5G58620 HAC07 AT5G06770 AT3G42860 ATSWI3B AT3G23740 AT3G27700 AFP4 AT3G16350 AT1G77570 AtTLP7 ATSCO1 AtCCA1
GO:0009639
response to red or far red light
BP7.295e-02FD-GOGAT CYP707A3 AT3G42860 AT3G02650 AtCCA1
GO:0006576
cellular biogenic amine metabolic proces...
BP7.445e-02PYL1 ALF1 AtOPR3
GO:0009220
pyrimidine ribonucleotide biosynthetic p...
BP7.445e-02Cpn60alpha2 AT4G31790 AT3G02650
GO:0051640
organelle localization
BP7.445e-02FD-GOGAT APC1 ATSCO1
GO:0009651
response to salt stress
BP7.530e-02AT4G16490 FD-GOGAT ATMYB44 AT4G32640 AFP4 AT3G16350 AtOPR3 AtCCA1
GO:0018130
heterocycle biosynthetic process
BP7.635e-02FWA AtIDD16 ATMYB44 AT5G58620 HAC07 PYL1 Cpn60alpha2 AT5G06770 AT3G42860 AT4G31790 AT3G27700 AT3G02650 AFP4 AT3G16350 AT1G77570 AtTLP7 ATSCO1 ALF1 AtOPR3 AtCCA1
GO:0009218
pyrimidine ribonucleotide metabolic proc...
BP7.663e-02Cpn60alpha2 AT4G31790 AT3G02650
GO:0016568
chromatin modification
BP7.698e-02HAC07 AT3G42860 ATSWI3B AT3G23740 AT3G02650
GO:0006221
pyrimidine nucleotide biosynthetic proce...
BP7.884e-02Cpn60alpha2 AT4G31790 AT3G02650
GO:0009694
jasmonic acid metabolic process
BP7.884e-02JAZ8 ALF1 AtOPR3
GO:0019438
aromatic compound biosynthetic process
BP7.947e-02FWA AtIDD16 FD-GOGAT ATMYB44 AT5G58620 HAC07 PYL1 Cpn60alpha2 AT5G06770 AT3G42860 AT4G31790 AT3G27700 AT3G02650 AFP4 AT3G16350 AT1G77570 AtTLP7 ATSCO1 ALF1 AtOPR3 AtCCA1
GO:0019219
regulation of nucleobase-containing comp...
BP8.019e-02FWA AtIDD16 ATMYB44 AT5G58620 HAC07 AT5G06770 AT3G42860 AT3G23740 AT3G27700 AFP4 AT3G16350 AT1G77570 AtTLP7 ATSCO1 AtCCA1
GO:0044270
cellular nitrogen compound catabolic pro...
BP8.043e-02PYL1 ERCC1 ALF1 AtOPR3
GO:0006220
pyrimidine nucleotide metabolic process
BP8.107e-02Cpn60alpha2 AT4G31790 AT3G02650
GO:0044106
cellular amine metabolic process
BP8.107e-02PYL1 ALF1 AtOPR3
GO:0050794
regulation of cellular process
BP8.160e-02AT5G12350 FWA AtIDD16 FD-GOGAT ATMYB44 AT5G58620 HAC07 AT5G46520 PYL1 AT5G06770 AT3G58210 AT3G42860 AT4G01910 JAZ8 AT3G23740 AT3G27700 AT3G07000 AFP4 AT3G16350 AT1G77570 AtTLP7 HSL1 ATSCO1 ALF1 AtOPR3 AT2G27500 AtCCA1
GO:0046700
heterocycle catabolic process
BP8.213e-02PYL1 ERCC1 ALF1 AtOPR3
GO:0048437
floral organ development
BP8.286e-02FD-GOGAT HAC07 AT3G61410 AT3G53040 HSL1 ATSCO1
GO:0010556
regulation of macromolecule biosynthetic...
BP8.475e-02FWA AtIDD16 ATMYB44 AT5G58620 HAC07 AT5G06770 AT3G42860 AT3G23740 AT3G27700 AFP4 AT3G16350 AT1G77570 AtTLP7 ATSCO1 AtCCA1
GO:2000112
regulation of cellular macromolecule bio...
BP8.475e-02FWA AtIDD16 ATMYB44 AT5G58620 HAC07 AT5G06770 AT3G42860 AT3G23740 AT3G27700 AFP4 AT3G16350 AT1G77570 AtTLP7 ATSCO1 AtCCA1
GO:0009790
embryo development
BP8.533e-02EMB2754 Cpn60alpha2 AT3G53040 EMB1691 ATSCO1 ATECP63
GO:1901606
alpha-amino acid catabolic process
BP8.562e-02PYL1 ALF1 AtOPR3
GO:0050789
regulation of biological process
BP8.673e-02AT5G12350 FWA AtIDD16 FD-GOGAT ATMYB44 AT5G58620 HAC07 AT5G46520 PYL1 AT5G06770 AT3G58210 AT3G42860 AT4G01910 ATSWI3B JAZ8 BGAL1 AT3G23740 AT3G27700 AT3G02650 AT3G07000 AFP4 AT3G16350 AT1G77570 AtTLP7 HSL1 ATSCO1 ALF1 AtOPR3 AT2G27500 AtCCA1 BASS2
GO:1901137
carbohydrate derivative biosynthetic pro...
BP8.698e-02EMB2754 PYL1 Cpn60alpha2 AT5G11700 AT4G31790 AT3G02650 ALF1 BASS2
GO:0000338
protein deneddylation
BP8.757e-02AT3G42860 AT3G02650
GO:0010388
cullin deneddylation
BP8.757e-02AT3G42860 AT3G02650
GO:0009063
cellular amino acid catabolic process
BP8.793e-02PYL1 ALF1 AtOPR3
GO:0051171
regulation of nitrogen compound metaboli...
BP8.948e-02FWA AtIDD16 ATMYB44 AT5G58620 HAC07 AT5G06770 AT3G42860 AT3G23740 AT3G27700 AFP4 AT3G16350 AT1G77570 AtTLP7 ATSCO1 AtCCA1
GO:0031323
regulation of cellular metabolic process
BP8.968e-02FWA AtIDD16 FD-GOGAT ATMYB44 AT5G58620 HAC07 PYL1 AT5G06770 AT3G42860 AT3G23740 AT3G27700 AFP4 AT3G16350 AT1G77570 AtTLP7 ATSCO1 AtCCA1
GO:0016144
S-glycoside biosynthetic process
BP9.027e-02PYL1 ALF1 BASS2
GO:0019758
glycosinolate biosynthetic process
BP9.027e-02PYL1 ALF1 BASS2
GO:0019761
glucosinolate biosynthetic process
BP9.027e-02PYL1 ALF1 BASS2
GO:0019439
aromatic compound catabolic process
BP9.092e-02PYL1 ERCC1 ALF1 AtOPR3
GO:0009908
flower development
BP9.110e-02FWA FD-GOGAT HAC07 AT3G61410 AT3G53040 AT3G02650 HSL1 ATSCO1
GO:0006970
response to osmotic stress
BP9.321e-02AT4G16490 FD-GOGAT ATMYB44 AT4G32640 AFP4 AT3G16350 AtOPR3 AtCCA1
GO:0090567
reproductive shoot system development
BP9.534e-02FWA FD-GOGAT HAC07 AT3G61410 AT3G53040 AT3G02650 HSL1 ATSCO1