GOID	TERM	ONTOLOGY	pValue	Genes
GO:0006221	pyrimidine nucleotide biosynthetic proce...	BP	3.84791900209166e-05	AT1G30240//PNM1//AT5G60990//ATRBP45A//Cpn60alpha2//AT3G57490//RBL//AT4G31210//AT4G28450//AR192//AT3G18600//AT3G23940//AT3G10530//PPR596//AT1G53645//AT1G13030//AT1G64880//EMB2289//AT2G21550//EIF2//AT2G18330//WDR55//ASP1
GO:0006220	pyrimidine nucleotide metabolic process	BP	4.6047759406524e-05	AT1G30240//PNM1//AT5G60990//ATRBP45A//Cpn60alpha2//AT3G57490//RBL//AT4G31210//AT4G28450//AR192//AT3G18600//AT3G23940//AT3G10530//PPR596//AT1G53645//AT1G13030//AT1G64880//EMB2289//AT2G21550//EIF2//AT2G18330//WDR55//ASP1
GO:0072528	pyrimidine-containing compound biosynthe...	BP	6.16171521364419e-05	AT1G30240//PNM1//AT5G60990//ATRBP45A//Cpn60alpha2//AtNCS1//AT3G57490//RBL//AT4G31210//AT4G28450//AR192//AT3G18600//AT3G23940//AT3G10530//PPR596//AT1G53645//AT1G13030//AT1G64880//EMB2289//AT2G21550//EIF2//AT2G18330//WDR55//ASP1
GO:0009220	pyrimidine ribonucleotide biosynthetic p...	BP	6.8513884937743e-05	AT1G30240//PNM1//AT5G60990//ATRBP45A//Cpn60alpha2//AT3G57490//RBL//AT4G31210//AT4G28450//AR192//AT3G18600//AT3G23940//AT3G10530//PPR596//AT1G53645//AT1G13030//AT1G64880//EMB2289//EIF2//AT2G18330//WDR55//ASP1
GO:0009218	pyrimidine ribonucleotide metabolic proc...	BP	9.70699795665426e-05	AT1G30240//PNM1//AT5G60990//ATRBP45A//Cpn60alpha2//AT3G57490//RBL//AT4G31210//AT4G28450//AR192//AT3G18600//AT3G23940//AT3G10530//PPR596//AT1G53645//AT1G13030//AT1G64880//EMB2289//EIF2//AT2G18330//WDR55//ASP1
GO:0072527	pyrimidine-containing compound metabolic...	BP	0.000158798058316691	AT1G30240//PNM1//AT5G60990//ATRBP45A//Cpn60alpha2//AtNCS1//AT3G57490//RBL//AT4G31210//AT4G28450//AR192//AT3G18600//AT3G23940//AT3G10530//PPR596//AT1G53645//AT1G13030//AT1G64880//EMB2289//AT2G21550//EIF2//AT2G18330//WDR55//ASP1
GO:0006261	DNA-dependent DNA replication	BP	0.00132006877444343	DDM2//MCM3//CCS52B//AT3G60660//AT4G31210//SNI1//ATRBR1//AT1G33420//ATMSH1//AT3G23740//ATMSH7//AT3G03130//AT1G79890//AT1G45110//AT1G65070//At-FANCM//AT1G10780//POLD3//ATE2FA//APC10//ATRPA2//APC7//EMB2795
GO:0009260	ribonucleotide biosynthetic process	BP	0.00159439837032519	ATPA//AT1G30240//PNM1//AT5G60990//ATRBP45A//Cpn60alpha2//AT3G57490//RBL//AHA8//AT4G31210//AT4G28450//AR192//AT3G18600//AT3G23940//AT3G10530//PPR596//AT1G53645//AT1G13030//AT1G64880//EMB2289//EIF2//ATECA3//AT2G18330//WDR55//ASP1
GO:0046390	ribose phosphate biosynthetic process	BP	0.00177554978900946	ATPA//AT1G30240//PNM1//AT5G60990//ATRBP45A//Cpn60alpha2//AT3G57490//RBL//AHA8//AT4G31210//AT4G28450//AR192//AT3G18600//AT3G23940//AT3G10530//PPR596//AT1G53645//AT1G13030//AT1G64880//EMB2289//EIF2//ATECA3//AT2G18330//WDR55//ASP1
GO:0016458	gene silencing	BP	0.00312358155302156	RPS16//AT3G56870//EMB2782//ACBP5//SRT1//DDM2//MCM3//ATSGS3//CCS52B//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//ATMSH7//emb1974//AT3G09360//AT3G10310//AT3G08980//FDM4//PPK1//AT1G76630//EMB2777//AT1G05950//AT1G63640//AT1G15940//AT1G13030//POLD3//DML1//AT2G27980//CSD1//AT2G22610//ATRPA2//AT2G01630//CSD2//APC7//CPFTSY//EMB2795
GO:0042542	response to hydrogen peroxide	BP	0.00316983698352602	TIN1//ATCNX1//BOB1//Cpn60alpha2//AT5G18750//AT3G46920//AT4G29520//AT4G29770//DER1//ATMEK1//ATWRKY7//AtCRT1a//ATMBF1C//AT1G67620//ATS9//AtRLP1//ATXPD//ATUTR1
GO:0006342	chromatin silencing	BP	0.00404136029351609	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//emb1974//AT3G09360//AT3G10310//PPK1//AT1G76630//AT1G05950//AT1G63640//AT1G15940//AT1G13030//DML1//AT2G27980//AT2G22610//AT2G01630//APC7//EMB2795
GO:0045814	negative regulation of gene expression, ...	BP	0.00479668488137062	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//emb1974//AT3G09360//AT3G10310//PPK1//AT1G76630//AT1G05950//AT1G63640//AT1G15940//AT1G13030//DML1//AT2G27980//AT2G22610//AT2G01630//APC7//EMB2795
GO:0000302	response to reactive oxygen species	BP	0.00572641894523283	TIN1//ATCNX1//BOB1//ATGH9A1//Cpn60alpha2//AT5G18750//OBF5//CYP71B5//AT3G46920//AT4G29520//AT4G29770//DER1//ATMEK1//ATWRKY7//AtCRT1a//ATMBF1C//ATCCS//AT1G67620//ATS9//AtRLP1//ATRBP45B//ATXPD//CSD1//CSD2//ATUTR1
GO:0009165	nucleotide biosynthetic process	BP	0.00736963062899579	ATPA//AT1G30240//PNM1//AT5G60990//ATRBP45A//Cpn60alpha2//AT3G57490//RBL//AHA8//AT4G31210//AT4G28450//AR192//AT3G18600//AT3G23940//AT3G10530//PPR596//AT1G53645//ATNADK2//AT1G13030//AT1G64880//EMB2289//AT2G21550//AT2G40290//ATE2FA//EIF2//ATECA3//AT2G18330//QPT//WDR55//NAPRT2//ASP1
GO:1901293	nucleoside phosphate biosynthetic proces...	BP	0.00736963062899579	ATPA//AT1G30240//PNM1//AT5G60990//ATRBP45A//Cpn60alpha2//AT3G57490//RBL//AHA8//AT4G31210//AT4G28450//AR192//AT3G18600//AT3G23940//AT3G10530//PPR596//AT1G53645//ATNADK2//AT1G13030//AT1G64880//EMB2289//AT2G21550//AT2G40290//ATE2FA//EIF2//ATECA3//AT2G18330//QPT//WDR55//NAPRT2//ASP1
GO:0045934	negative regulation of nucleobase-contai...	BP	0.00775062211456876	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//HD2C//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//ATMSH7//emb1974//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//At-FANCM//AT1G13030//DML1//AT2G27980//APC10//AT2G22610//ATOFP16//AT2G01630//APC7//EMB2795//AS1
GO:0051172	negative regulation of nitrogen compound...	BP	0.00827505922747955	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//HD2C//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//ATMSH7//emb1974//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//At-FANCM//AT1G13030//DML1//AT2G27980//APC10//AT2G22610//ATOFP16//AT2G01630//APC7//EMB2795//AS1
GO:0031047	gene silencing by RNA	BP	0.00846855618975745	RPS16//AT3G56870//EMB2782//ACBP5//ATSGS3//CCS52B//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//emb1974//AT3G09360//AT3G08980//FDM4//PPK1//AT1G76630//AT1G63640//AT1G15940//AT1G13030//POLD3//AT2G27980//CSD1//AT2G22610//ATRPA2//AT2G01630//CSD2//APC7//CPFTSY//EMB2795
GO:0006457	protein folding	BP	0.00915601202418302	AT4G17070//AT5G27240//TIN1//ATCNX1//BOB1//Cpn60alpha2//AT5G18750//AT5G06410//AT3G55520//AT4G39150//AT4G29520//AT4G29770//DER1//AR192//ATWRKY7//ATERDJ2B//J20//AtCRT1a//ATMBF1C//ATFKBP42//AT3G02530//AtHsp90-6//AT1G67620//AT1G74070//AT1G49245//ATS9//AtRLP1//AT1G01940//ATXPD//ATUTR1
GO:0009408	response to heat	BP	0.00936811476774444	AT5G09240//TIN1//ATCNX1//BOB1//FTSH11//AtCEST//Cpn60alpha2//AT-HSFA3//AT4G29520//AT4G29770//DER1//AR192//ATWRKY7//AtCRT1a//ATMSH1//ATMBF1C//AT1G67620//ATS9//AtRLP1//AT1G11270//CYP71B2//ATXPD//ARA-4//ATUTR1
GO:0040029	regulation of gene expression, epigeneti...	BP	0.0099879707979427	RPS16//AT3G56870//EMB2782//ACBP5//AT5G57970//SRT1//DDM2//MCM3//ATSGS3//CCS52B//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//ATRBR1//FDM3//AT3G20010//ATMSH1//AT3G23740//ATMSH7//emb1974//AT3G09360//AT3G10310//AT3G08980//FDM4//PPK1//AT1G76630//AT1G05950//AT1G63640//AT1G15940//AT1G13030//POLD3//DML1//AT2G27980//CSD1//AT2G22610//ATRPA2//AT2G01630//CSD2//APC7//CPFTSY//EMB2795
GO:0009259	ribonucleotide metabolic process	BP	0.0103391180441363	ATPA//AT1G30240//PNM1//AT5G60990//ATRBP45A//Cpn60alpha2//AT3G57490//RBL//AHA8//AT4G31210//AT4G28450//AR192//AT3G18600//AT3G23940//AT3G10530//PPR596//AT1G53645//AT1G13030//AT1G64880//EMB2289//EIF2//ATECA3//AT2G18330//WDR55//ASP1
GO:0006304	DNA modification	BP	0.0117999266147185	ACBP5//AT5G57970//DDM2//MCM3//CCS52B//AT4G29360//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//AT3G23740//ATMSH7//FDM4//PPK1//AT1G63640//AT1G15940//POLD3//AT1G30660//DML1//AT2G22610//ATRPA2//EMB2795
GO:0051716	cellular response to stimulus	BP	0.0124900535502386	PLA//RPS16//AT1G67800//AtMAPR4//BAL//RPP5//AT5G20700//AT4G36550//AtbZIP3//EMB2782//TIN1//ATCNX1//NRPC1//AT5G59660//NPL1//AT5G57970//GATA21//AT5G55450//ANK//BOB1//AT5G52750//AT5G49770//AT5G49780//ATGH9A1//AT5G46450//AT5G46390//ATDUR3//AT5G45060//AT5G45220//ARA8//ATCRA1//ATMKK3//OLE2//GMI1//ATSGS3//ATICMTA//CaS//Cpn60alpha2//AT5G18360//AT5G18370//CSA1//CCS52B//AT5G10760//AT5G10020//AtPPa6//AT5G07580//ERL2//OBF5//ATMYB33//AT3G62270//AT3G61670//AT3G53390//AtRLP45//CYP71B5//AT3G50210//AT3G48640//AT3G47570//AT3G46600//ARAC6//AT4G36050//AT4G34880//ATMKK2//AT4G29520//DER1//ARAC7//CRC//ATPDI7//ATMEK1//OLE1//ATWRKY7//CRK10//ATBRCA1//BAM3//SNI1//ATHSGBP//AtRLP47//EARLI1//AtNIP5;1//ALN//AtRLP46//MEE51//AT4G03010//EZA1//CBL5//ATB//ANAC008//AtCRT1a//FDM3//AtNek7//AT3G20010//AtRLP43//ATMYB30//ATMSH1//AT2G43280//ATWRKY54//AT3G13226//AtRLP36//AIG2//AT3G27473//CLE27//ATMBF1C//ATMSH7//ALDH1A//LHCB2//ATL2//AT3G02400//AT3G04210//AT3G01860//AT3G08980//AT1G13470//GLP4//ATCCS//AT1G56520//PPK1//CRF8//ATGSTF14//PSY1R//AtRLP13//AT1G79890//AT1G67620//AT1G63870//NRT1.5//CLE3//ATS9//p24delta5//NIMIN-1//AtRLP1//AT1G63640//AT1G76110//AT1G15940//AT1G65070//At-FANCM//AtRLP17//anac021//PAC//AT1G72920//AT1G11240//AtRLP3//AT1G28570//SRD2//CYP71B7//GAI//POLD3//5PTASE13//GUN1//ARF3//anac036//AT2G36970//DSPTP1E//DML1//ATRAD51B//ATERF15//ATXPD//CSD1//PGR5//ATRPA2//ATCSLA07//AT2G42290//AtRLP19//AtPERK4//AtPNP-A//CSD2//AL6//APC7//AT2G28780//ATPR1//ARA-4//ATMPK12//CPFTSY//ARAC9//EMB2795//ATMAK3//COI1//ATUTR1//AtRLP23
GO:0051053	negative regulation of DNA metabolic pro...	BP	0.0128519472991002	ATMSH1//ATMSH7//At-FANCM//APC10
GO:0010605	negative regulation of macromolecule met...	BP	0.0130428191587442	RPS16//AT3G56870//EMB2782//ACBP5//SRT1//DDM2//MCM3//ATSGS3//CCS52B//HD2C//AT3G61670//CYCD3;3//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//ATMSH7//emb1974//AT3G09360//AT3G10310//AT3G08980//FDM4//PPK1//CRF8//AT1G76630//EMB2777//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//At-FANCM//AT1G13030//POLD3//DSPTP1E//DML1//AT2G27980//CKS1//CSD1//APC10//AT2G22610//ATRPA2//ATOFP16//AT2G01630//CSD2//APC7//CPFTSY//EMB2795//AS1
GO:0015931	nucleobase-containing compound transport	BP	0.0141209946395834	RANBP1//AT5G03560//AtNCS1//NRPA1//OLE1//ATNDT2//APUM24//AT3G10090//AtNUP1//ATPUP14//ATUPS2//ATPUP5//AT2G40700//ATUTR1
GO:0006346	methylation-dependent chromatin silencin...	BP	0.0146496999563652	AT3G56870//ACBP5//AT3G61670//AT4G29360//AT4G26870//FDM3//AT3G20010//emb1974//PPK1//AT1G76630//AT1G63640//AT1G15940//AT1G13030//AT2G27980//AT2G01630//EMB2795
GO:0000165	MAPK cascade	BP	0.0151439843502113	PLA//AT5G55450//ANK//AT5G52750//ARA8//ATMKK3//AT5G10760//AtPPa6//AT3G48640//ATMKK2//ATMEK1//AtRLP46//ATWRKY54//AIG2//ATL2//AT1G13470//NIMIN-1//AT1G76110//anac036//DSPTP1E//ATCSLA07//AtRLP19//ATPR1//AtRLP23
GO:0010629	negative regulation of gene expression	BP	0.01575054227633	RPS16//AT3G56870//EMB2782//ACBP5//SRT1//DDM2//MCM3//ATSGS3//CCS52B//HD2C//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//ATMSH7//emb1974//AT3G09360//AT3G10310//AT3G08980//FDM4//PPK1//CRF8//AT1G76630//EMB2777//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//AT1G13030//POLD3//DML1//AT2G27980//CSD1//AT2G22610//ATRPA2//ATOFP16//AT2G01630//CSD2//APC7//CPFTSY//EMB2795//AS1
GO:0023014	signal transduction by phosphorylation	BP	0.0163356193927187	PLA//AT5G55450//ANK//AT5G52750//ARA8//ATMKK3//AT5G10760//AtPPa6//AT3G48640//ATMKK2//ATMEK1//AtRLP46//ATWRKY54//AIG2//ATL2//AT1G13470//NIMIN-1//AT1G76110//anac036//DSPTP1E//ATCSLA07//AtRLP19//ATPR1//AtRLP23
GO:0006260	DNA replication	BP	0.0164452562759645	AT3G56870//DDM2//MCM3//CCS52B//AT3G60660//CYCD3;3//AT4G31210//ATORC5//SNI1//AT4G18820//ATRBR1//AT1G33420//ATMSH1//AT3G23740//ATMSH7//AT3G03130//AT1G79890//ATS9//AT1G45110//AT1G14460//UBC20//AT1G65070//At-FANCM//AT1G10780//POLD3//AT2G21550//ATE2FA//CKS1//APC10//ATRPA2//APC7//EMB2795
GO:0009644	response to high light intensity	BP	0.0169531052364344	TIN1//ATCNX1//NPL1//BOB1//Cpn60alpha2//AT5G18750//AT3G46920//AT4G29520//AT4G29770//DER1//ATWRKY7//AtCRT1a//ATMBF1C//LHCB2//AT1G67620//ATS9//AtRLP1//ATXPD//PGR5//ATUTR1
GO:0006305	DNA alkylation	BP	0.0174325739359421	ACBP5//AT5G57970//DDM2//MCM3//CCS52B//AT4G29360//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//AT3G23740//ATMSH7//FDM4//PPK1//AT1G63640//AT1G15940//POLD3//DML1//AT2G22610//ATRPA2//EMB2795
GO:0006306	DNA methylation	BP	0.0174325739359421	ACBP5//AT5G57970//DDM2//MCM3//CCS52B//AT4G29360//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//AT3G23740//ATMSH7//FDM4//PPK1//AT1G63640//AT1G15940//POLD3//DML1//AT2G22610//ATRPA2//EMB2795
GO:0031425	chloroplast RNA processing	BP	0.0186182356589279	OTP84//PAC//RNE//OTP81
GO:0010558	negative regulation of macromolecule bio...	BP	0.0201153378582253	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//HD2C//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//emb1974//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//AT1G13030//DML1//AT2G27980//APC10//AT2G22610//ATOFP16//AT2G01630//APC7//EMB2795//AS1
GO:2000113	negative regulation of cellular macromol...	BP	0.0201153378582253	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//HD2C//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//emb1974//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//AT1G13030//DML1//AT2G27980//APC10//AT2G22610//ATOFP16//AT2G01630//APC7//EMB2795//AS1
GO:0006259	DNA metabolic process	BP	0.0203041801449107	AtMAPR4//AT3G56870//ACBP5//DPD1//NRPC1//AT5G57970//DDM2//MCM3//GMI1//AT5G17930//CCS52B//AT3G60660//CYCD3;3//AT4G36050//AT4G31210//ATORC5//AT4G29360//ATBRCA1//SNI1//AT4G18820//EZA1//MDO1//ATRBR1//FDM3//AT1G33420//AT3G20010//ATMSH1//AT3G23740//AT2G43280//AT3G13226//ATMSH7//AT3G02400//AT3G03130//FDM4//PPK1//AT1G79890//ATS9//AT1G45110//AT1G14460//AT1G63640//AT1G15940//UBC20//AT1G65070//At-FANCM//AT1G11240//AT1G10780//AtGLE1//POLD3//AT1G30660//AT2G21550//DML1//ATE2FA//CKS1//ATRAD51B//ATXPD//APC10//AT2G22610//ATRPA2//AT2G40700//APC7//EMB2795//ATMAK3
GO:0044728	DNA methylation or demethylation	BP	0.0203495992115959	ACBP5//AT5G57970//DDM2//MCM3//CCS52B//AT4G29360//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//AT3G23740//ATMSH7//FDM4//PPK1//AT1G63640//AT1G15940//POLD3//DML1//AT2G22610//ATRPA2//EMB2795
GO:0045892	negative regulation of transcription, DN...	BP	0.0205365504819635	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//HD2C//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//emb1974//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//AT1G13030//DML1//AT2G27980//AT2G22610//ATOFP16//AT2G01630//APC7//EMB2795//AS1
GO:1902679	negative regulation of RNA biosynthetic ...	BP	0.0205365504819635	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//HD2C//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//emb1974//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//AT1G13030//DML1//AT2G27980//AT2G22610//ATOFP16//AT2G01630//APC7//EMB2795//AS1
GO:1903507	negative regulation of nucleic acid-temp...	BP	0.0205365504819635	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//HD2C//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//emb1974//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//AT1G13030//DML1//AT2G27980//AT2G22610//ATOFP16//AT2G01630//APC7//EMB2795//AS1
GO:0051253	negative regulation of RNA metabolic pro...	BP	0.0217578879183561	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//HD2C//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//emb1974//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//AT1G13030//DML1//AT2G27980//AT2G22610//ATOFP16//AT2G01630//APC7//EMB2795//AS1
GO:0035725	sodium ion transmembrane transport	BP	0.02270015618537	ATDUR3//AT4G22840//ATNHD1//ATCHX19//ATCHX16//ATCHX13
GO:0006270	DNA replication initiation	BP	0.0245760029840239	MCM3//SNI1//AT3G23740//ATMSH7//AT3G03130//AT1G10780//POLD3//ATE2FA//ATRPA2//EMB2795
GO:0031327	negative regulation of cellular biosynth...	BP	0.0251600204732808	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//HD2C//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//emb1974//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//AT1G13030//DML1//AT2G27980//APC10//AT2G22610//ATOFP16//AT2G01630//APC7//EMB2795//AS1
GO:0043414	macromolecule methylation	BP	0.0261317354788383	AT4G15640//AT3G56870//ACBP5//AT5G59850//AT5G57970//DDM2//MCM3//ATICMTA//AT5G14600//CCS52B//HD2C//AT3G58700//AT3G57490//RBL//AT4G29360//SNI1//EZA1//AT1G56210//FDM3//AT3G20010//AT3G18600//CDC73//ATMSH1//AT3G23740//APUM24//ATMSH7//emb1974//AT3G04920//AT3G10310//AT3G11510//FDM4//PPK1//AT1G05950//AT1G63640//AT1G15940//ATLSD1//AT1G13030//POLD3//DML1//AT2G18330//AT2G22610//ATRPA2//AT2G01630//APC7//EMB2795
GO:0009642	response to light intensity	BP	0.0271295583877131	PLA//TIN1//ATCNX1//NPL1//BOB1//Cpn60alpha2//AT5G18750//AT3G46920//AT4G29520//AT4G29770//DER1//ATWRKY7//AtCRT1a//ATMBF1C//LHCB2//AT1G67620//ATS9//AtRLP1//ATXPD//CSD1//PGR5//CSD2//ATUTR1
GO:0051567	histone H3-K9 methylation	BP	0.0274069627758094	AT3G56870//ACBP5//DDM2//MCM3//CCS52B//AT4G29360//SNI1//FDM3//ATMSH1//AT3G23740//ATMSH7//emb1974//AT3G10310//PPK1//AT1G05950//AT1G63640//AT1G13030//AT2G22610//ATRPA2//AT2G01630//EMB2795
GO:0061647	histone H3-K9 modification	BP	0.0274069627758094	AT3G56870//ACBP5//DDM2//MCM3//CCS52B//AT4G29360//SNI1//FDM3//ATMSH1//AT3G23740//ATMSH7//emb1974//AT3G10310//PPK1//AT1G05950//AT1G63640//AT1G13030//AT2G22610//ATRPA2//AT2G01630//EMB2795
GO:0009890	negative regulation of biosynthetic proc...	BP	0.0280287798024686	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//HD2C//AT3G61670//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//emb1974//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//AT1G13030//DML1//AT2G27980//APC10//AT2G22610//ATOFP16//AT2G01630//APC7//EMB2795//AS1
GO:2000377	regulation of reactive oxygen species me...	BP	0.0293020664233661	PLA//AT4G36550//AT5G55450//ANK//ARA8//AtPPa6//AT3G48640//ATMKK2//ATMEK1//AtRLP46//ATWRKY54//AIG2//ATL2//AT1G13470//ATGSTF14//NIMIN-1//AT1G76110//GAI//ATCSLA07//AtRLP19//ATPR1//AtRLP23
GO:0001101	response to acid chemical	BP	0.0296321251325194	PLA//AT1G67800//BAL//AT4G36550//AT5G64010//AT5G59540//GATA21//AT5G55450//ANK//ATGH9A1//AtSAD1//AtCEST//ARA8//ATCRA1//ATMKK3//ATICMTA//AtPPa6//ERL2//OBF5//ATMYB33//HD2C//AT3G62270//AtMYB17//AtMYB45//AT3G48640//ATMKK2//CRC//AT4G28080//ATMEK1//CRK20//CRK5//ChiC//ERD3//ATGRP2//EARLI1//AtNIP5;1//AtRLP46//CBL5//ATB//AtHB33//ATMYB30//AT3G22060//ATWRKY54//AIG2//ATMBF1C//ALDH1A//LHCB2//ATL2//AT1G13470//GLP4//NRB4//ATGSTF14//NRT1.5//ATPER1//NIMIN-1//AT1G76110//AtRLP17//CYP71B7//ATRBP45B//GAI//ESP//5PTASE13//DSPTP1E//CSD1//PGR5//ATCSLA07//AtRLP19//AtPERK4//CSD2//AT2G27660//ATPRB1//ATPR1//ATMPK12//AT2G26110//ATCAMBP25//AT2G14835//AS1//COI1//ATGRP23//AtRLP23
GO:0031324	negative regulation of cellular metaboli...	BP	0.0298883071807534	AT3G56870//ACBP5//SRT1//DDM2//CCS52B//HD2C//AT3G61670//CYCD3;3//AT4G29360//AT4G26870//SNI1//EZA1//FDM3//AT3G20010//ATMSH1//ATMSH7//emb1974//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//NIMIN-1//AT1G05950//AT1G63640//AT1G15940//At-FANCM//AT1G13030//DSPTP1E//DML1//AT2G27980//CKS1//APC10//AT2G22610//ATOFP16//AT2G01630//APC7//EMB2795//AS1
GO:0010310	regulation of hydrogen peroxide metaboli...	BP	0.0316506189511355	PLA//AT4G36550//AT5G55450//ANK//ARA8//AtPPa6//AT3G48640//ATMKK2//ATMEK1//AtRLP46//ATWRKY54//AIG2//ATL2//AT1G13470//ATGSTF14//NIMIN-1//AT1G76110//ATCSLA07//AtRLP19//ATPR1//AtRLP23
GO:0006950	response to stress	BP	0.0319322480539407	ATPA//PLA//RPS16//AT2G45460//AT1G67800//AT4G17070//AtMAPR4//BAL//RPP5//ATPAL3//AT5G09240//AT5G20700//AT5G19350//AT4G36550//EMB2782//ACP5//AGL69//TIN1//AT5G64010//ATCNX1//NRPC1//AT5G59070//AT5G57970//AT5G55450//ATPXG2//ANK//BOB1//AT5G52840//FTSH11//AT5G52750//ATGH9A1//AtSAD1//ADR1-L3//AT5G47250//AT5G46450//ATDUR3//AT5G45060//RL2//AT5G45220//AtCEST//ARA8//AT5G43740//RPT4A//ATMKK3//OLE2//THI2.2//AT5G24210//GMI1//ATSGS3//Cpn60alpha2//AT5G18750//AT5G18360//AT5G18370//CSA1//CCS52B//AT5G10760//AGL25//AtPPa6//OBF5//AT-HSFA3//HD2C//AT3G62270//AT3G61670//AGL18//PMR6//CYP71B5//AT3G50210//AT3G48710//AT3G48640//AT3G46920//AT3G46600//AT4G38560//AT4G36050//ACDO1//ATMKK2//AT4G29520//AT4G29770//DER1//CRC//AT4G26870//AR192//AtFBA7//ATMEK1//OLE1//ATWRKY7//CRK20//CRK10//CRK5//ATBRCA1//ChiC//ERD3//SNI1//ATGRP2//AtRLP47//EARLI1//AtNIP5;1//ALN//AtRLP46//MEE51//EZA1//AtPME41//CBL5//ATB//ANAC008//AtCRT1a//FDM3//AT3G20010//ATMYB30//ATMSH1//AT3G16530//AT3G24120//AT2G43280//ATWRKY54//CYP71B23//AT3G13226//AtRLP36//TOM20-3//AIG2//ATMBF1C//ATMSH7//ALDH1A//LHCB2//ATL2//AT3G02400//AT3G04210//AT3G01860//AT3G08980//AT1G13470//GLP4//NRB4//ATCCS//SUMM2//AT1G56520//PPK1//CRF8//ATGSTF14//PSY1R//ALPHA//AT1G73660//AT1G79890//AT1G67620//AT1G74440//AT1G63870//LOV1//NRT1.5//ATPER1//ATS9//p24delta5//NIMIN-1//AtRLP1//PEX11C//AT1G63640//AT1G76110//AT1G15940//UBC20//AT1G65070//AT1G65870//At-FANCM//CW9//ATKAS2//AT1G70870//AT1G70880//AT1G72920//AT1G50290//AT1G11240//AT1G11270//AtRLP3//AT1G14210//AT1G28570//CYP71B7//ATRBP45B//ADT1//CYP71B2//GAI//AT1G24010//POLD3//ESP//5PTASE13//AT2G24800//anac036//ATRPN1A//DML1//AT2G21195//ATRAD51B//ATXPD//AT1G22900//CSD1//AT1G55450//APC10//PGR5//ATRPA2//ATCSLA07//AtRLP19//AtPNP-A//LCR69//CSD2//AL6//APC7//AT2G27660//ATPR1//ARA-4//AT2G43090//CPFTSY//ATCAMBP25//ATMES1//ATMAK3//AS1//COI1//ATUTR1//AtRLP23
GO:0032259	methylation	BP	0.0326552827798082	AT4G15640//AT3G56870//ACBP5//AT5G59850//AT5G57970//DDM2//MCM3//ATICMTA//AT5G14600//CCS52B//HD2C//AT3G58700//AT3G57490//RBL//AT4G29360//SNI1//EZA1//AT1G56210//FDM3//AT3G20010//AT3G18600//CDC73//ATMSH1//AT3G23740//APUM24//ATMSH7//emb1974//AT3G04920//AT3G10310//AT3G11510//FDM4//PPK1//AT1G05950//AT1G63640//AT1G15940//ATLSD1//AT1G13030//POLD3//DML1//AT2G18330//AT2G22610//ATRPA2//AT2G01630//APC7//EMB2795
GO:0007276	gamete generation	BP	0.0341540026886628	AT2G45460//ACBP5//NRPC1//AT5G17930//CCS52B//ATMYB33//AT4G02820//AT3G12860//AT1G48580//AT1G11240//AtGLE1//AT2G05120//AT1G51380//APC10//AT2G18330//AT2G40700//APC7
GO:0006995	cellular response to nitrogen starvation	BP	0.0343185034826332	ATDUR3//ATMEK1//CRK10//ALN
GO:0034654	nucleobase-containing compound biosynthe...	BP	0.0361149417108415	PSAJ//RPL33//RPS18//RPS2//RPOB//ATPA//RPS16//KAN3//AT1G30240//CIB5//AT5G09240//AT5G32460//AT3G56870//AT1G16640//AT5G15700//AtbZIP3//ACBP5//AT5G66770//AT5G65320//AGL69//AT5G63700//PNM1//AT5G60990//NRPC1//NPL1//GATA21//SRT1//ATRBP45A//AT5G54630//DDM2//AT5G46160//Cpn60alpha2//CCS52B//AT5G10970//AGL25//TCP17//AT5G07580//AT5G06770//ATMYB33//AT-HSFA3//HD2C//AtNCS1//AT3G61670//AtMYB17//GATA4//NRPA1//AGL18//AT3G57490//RBL//AT3G53680//AtMYB45//AT3G46600//AHA8//BBX19//BLH6//GATA3//AT4G31805//AT4G31210//ATMKK2//AT4G29360//AT4G28450//CIP7//AT4G26870//AR192//AtFBA7//ATMEK1//ATWRKY7//AT4G24440//B160//SNI1//ATGRP2//KELP//AtRLP46//BSM//EZA1//YAB3//ANAC008//IAA13//ANAC041//AT3G12370//FDM3//ARF6//AT1G33420//AtHB33//AT3G20010//AT3G18600//AT3G23940//TBP1//ATMSH1//AT3G24120//ATWRKY54//AtIDD11//NRPB9A//AT3G16230//CRF11//ATMBF1C//NF-YA6//AT3G02400//emb1974//ATHAP2B//AT3G10530//AtMYB3R3//AT3G09360//AT3G10310//PPK1//CRF8//AT1G76630//PPR596//ATHB13//NF-YC10//HLL//NIMIN-1//AT1G05950//AT1G53645//AT1G75340//AT1G63640//AT1G76110//AT1G15940//APT2//anac021//ATNADK2//anac016//SRD2//AT1G13030//AT1G64880//POLD3//RNE//EMB2289//AT2G21550//anac036//AT1G31150//AT2G40290//DML1//ATE2FA//AT2G27980//ATERF15//EIF2//ATXPD//AT1G11950//SPL10//ATECA3//HDG2//AT2G20400//AT2G18330//AT2G22610//WRKY3//ATOFP16//QPT//AT2G01630//AtRLP19//AL6//APC7//CPFTSY//WDR55//EMB2795//NAPRT2//ASP1//AS1//AtRLP23
GO:0006275	regulation of DNA replication	BP	0.0367131848379284	AT3G56870//MCM3//CCS52B//SNI1//ATRBR1//ATMSH1//AT3G23740//ATMSH7//AT3G03130//AT1G10780//POLD3//ATE2FA//APC10//ATRPA2//APC7//EMB2795
GO:0019953	sexual reproduction	BP	0.0396895220979656	AT2G45460//ACBP5//NRPC1//AT5G17930//CCS52B//ATMYB33//AT4G02820//ATRBR1//AT3G12860//ATHAP2B//AT1G48580//AT1G11240//AtGLE1//AT2G05120//AT1G51380//APC10//AT2G18330//AT2G40700//APC7
GO:0006814	sodium ion transport	BP	0.0400386448112229	ATDUR3//AT4G22840//ATNHD1//ATCHX19//ATCHX16//ATCHX13
GO:0035556	intracellular signal transduction	BP	0.0420782242860993	PLA//AtbZIP3//NPL1//AT5G55450//ANK//AT5G52750//AT5G46390//ARA8//ATMKK3//AT5G10760//AtPPa6//AT5G07580//OBF5//AT3G48640//AT3G46600//ARAC6//ATMKK2//ARAC7//ATPDI7//ATMEK1//ATHSGBP//AtRLP46//CBL5//AtNek7//ATWRKY54//AIG2//AT3G27473//ATMBF1C//ATL2//AT1G13470//NIMIN-1//AT1G76110//ARF3//anac036//AT2G36970//DSPTP1E//ATERF15//ATCSLA07//AtRLP19//AtPERK4//ATPR1//ARA-4//ARAC9//EMB2795//AtRLP23
GO:0006952	defense response	BP	0.0426544201453829	ATPA//PLA//RPS16//AT1G67800//BAL//RPP5//ATPAL3//AT5G20700//AT4G36550//EMB2782//ATCNX1//AT5G55450//ATPXG2//ANK//AT5G52750//ADR1-L3//AT5G47250//AT5G46450//AT5G45060//AT5G45220//ARA8//AT5G43740//ATMKK3//THI2.2//AT5G24210//ATSGS3//AT5G18360//AT5G18370//CSA1//AT5G10760//AtPPa6//OBF5//AT3G61670//PMR6//AT3G48640//AT3G46600//AT4G38560//ATMKK2//AT4G29520//AT4G26870//ATMEK1//CRK20//CRK5//SNI1//AtRLP47//EARLI1//AtRLP46//EZA1//AtCRT1a//FDM3//AT3G20010//ATMYB30//AT3G16530//ATWRKY54//CYP71B23//AtRLP36//AIG2//ALDH1A//ATL2//AT3G04210//AT3G01860//AT3G08980//AT1G13470//NRB4//SUMM2//AT1G56520//PPK1//ATGSTF14//PSY1R//AT1G74440//AT1G63870//LOV1//p24delta5//NIMIN-1//PEX11C//AT1G63640//AT1G76110//AT1G15940//AT1G65870//CW9//AT1G70870//AT1G70880//AT1G72920//AtRLP3//AT1G28570//CYP71B7//AT1G24010//ESP//anac036//AT1G22900//CSD1//ATCSLA07//AtRLP19//AtPNP-A//LCR69//AT2G27660//ATPR1//CPFTSY//ATMES1//ATMAK3//AS1//COI1//AtRLP23
GO:0034968	histone lysine methylation	BP	0.0488873665903398	AT3G56870//ACBP5//DDM2//MCM3//CCS52B//AT4G29360//SNI1//FDM3//AT3G18600//CDC73//ATMSH1//AT3G23740//ATMSH7//emb1974//AT3G10310//PPK1//AT1G05950//AT1G63640//ATLSD1//AT1G13030//AT2G18330//AT2G22610//ATRPA2//AT2G01630//EMB2795
GO:0010048	vernalization response	BP	0.0495671558484804	AT2G45460//AT5G19350//AGL69//RL2//AGL25//AGL18//AT3G48710//EZA1//AT3G24120//ADT1
GO:0051052	regulation of DNA metabolic process	BP	0.0513576993025111	AT3G56870//NRPC1//MCM3//CCS52B//SNI1//ATRBR1//ATMSH1//AT3G23740//AT3G13226//ATMSH7//AT3G03130//AT1G79890//At-FANCM//AT1G10780//POLD3//ATE2FA//APC10//ATRPA2//APC7//EMB2795
GO:0018022	peptidyl-lysine methylation	BP	0.0516999486834227	AT3G56870//ACBP5//DDM2//MCM3//CCS52B//AT4G29360//SNI1//FDM3//AT3G18600//CDC73//ATMSH1//AT3G23740//ATMSH7//emb1974//AT3G10310//PPK1//AT1G05950//AT1G63640//ATLSD1//AT1G13030//AT2G18330//AT2G22610//ATRPA2//AT2G01630//EMB2795
GO:0008356	asymmetric cell division	BP	0.0524017161841911	DDM2//SGR7//ATRBR1//AtRLP17//AS1
GO:0006606	protein import into nucleus	BP	0.0542965017249305	AT1G30240//AT1G26170//RANBP1//NRPA1//OLE1//AT4G02820//APUM24//AT3G12860//PPR596//AT1G11240//AT2G04050//AT1G60080//AT2G20720//AT2G40700
GO:0044744	protein targeting to nucleus	BP	0.0542965017249305	AT1G30240//AT1G26170//RANBP1//NRPA1//OLE1//AT4G02820//APUM24//AT3G12860//PPR596//AT1G11240//AT2G04050//AT1G60080//AT2G20720//AT2G40700
GO:1902593	single-organism nuclear import	BP	0.0542965017249305	AT1G30240//AT1G26170//RANBP1//NRPA1//OLE1//AT4G02820//APUM24//AT3G12860//PPR596//AT1G11240//AT2G04050//AT1G60080//AT2G20720//AT2G40700
GO:0009875	pollen-pistil interaction	BP	0.0552673539538238	AT3G51710//AT4G27300//AT1G11300//AT1G61490//AT1G61420//AT1G61500
GO:0048544	recognition of pollen	BP	0.0552673539538238	AT3G51710//AT4G27300//AT1G11300//AT1G61490//AT1G61420//AT1G61500
GO:0009814	defense response, incompatible interacti...	BP	0.0555316266140197	PLA//BAL//RPP5//AT4G36550//ATCNX1//AT5G55450//ANK//AT5G52750//ARA8//ATMKK3//AT5G24210//AT5G10760//AtPPa6//OBF5//PMR6//AT3G48640//AT4G38560//ATMKK2//AT4G29520//ATMEK1//SNI1//EARLI1//AtRLP46//AtCRT1a//ATWRKY54//CYP71B23//AIG2//ALDH1A//ATL2//AT3G04210//AT1G13470//ATGSTF14//AT1G74440//p24delta5//NIMIN-1//PEX11C//AT1G76110//anac036//ATCSLA07//AtRLP19//AtPNP-A//ATPR1//ATMES1//COI1//AtRLP23
GO:0032875	regulation of DNA endoreduplication	BP	0.0558170670682362	CCS52B//ATRBR1//APC10//APC7
GO:0043562	cellular response to nitrogen levels	BP	0.0558170670682362	ATDUR3//ATMEK1//CRK10//ALN
GO:0009751	response to salicylic acid	BP	0.0563820513898974	PLA//AT1G67800//BAL//AT4G36550//AT5G55450//ANK//ARA8//AtPPa6//OBF5//AtMYB17//AtMYB45//AT3G48640//ATMKK2//ATMEK1//CRK20//CRK5//EARLI1//AtRLP46//ATMYB30//ATWRKY54//AIG2//ATL2//AT1G13470//NRB4//ATGSTF14//NIMIN-1//AT1G76110//GAI//ATCSLA07//AtRLP19//ATPRB1//ATPR1//AS1//ATGRP23//AtRLP23
GO:0006979	response to oxidative stress	BP	0.0568389321322643	AT4G17070//TIN1//ATCNX1//BOB1//ATGH9A1//AtCEST//Cpn60alpha2//AT5G18750//OBF5//CYP71B5//AT3G46920//ACDO1//AT4G29520//AT4G29770//DER1//ATMEK1//ATWRKY7//AtCRT1a//ATMBF1C//ATCCS//ALPHA//AT1G67620//ATS9//AtRLP1//AT1G50290//ATRBP45B//AT2G24800//AT2G21195//ATXPD//CSD1//CSD2//ATUTR1
GO:0007154	cell communication	BP	0.0589841978038967	PLA//RALF18//AT1G67800//BAL//RPP5//AT4G36550//AtbZIP3//TIN1//AT5G59660//NPL1//GATA21//AT5G55450//ANK//AT5G52750//AT5G49770//AT5G49780//ATGH9A1//AT5G46450//AT5G46390//ATDUR3//AT5G45060//AT5G45220//ARA8//ATMKK3//OLE2//ATICMTA//AT5G18360//AT5G18370//CSA1//CCS52B//AT5G10760//AT5G10020//AtPPa6//AT5G07580//ERL2//OBF5//ATMYB33//AT3G62270//AT3G61670//AT3G53390//AtRLP45//AT3G51710//AT3G50210//AT3G48640//AT3G47570//AT3G46600//ARAC6//ATMKK2//ARAC7//CRC//ATPDI7//AT4G27300//ATMEK1//OLE1//CRK10//BAM3//ATHSGBP//AtRLP47//EARLI1//AtNIP5;1//ALN//AtRLP46//MEE51//AT4G03010//EZA1//CBL5//ATB//FDM3//AtNek7//AT3G20010//AtRLP43//ATWRKY54//AtRLP36//AIG2//AT3G27473//CLE27//ATMBF1C//LHCB2//ATL2//AT3G04210//AT1G13470//GLP4//AT1G56520//PPK1//CRF8//ATGSTF14//PSY1R//AtRLP13//AT1G63870//NRT1.5//CLE3//NIMIN-1//AtRLP1//AT1G63640//AT1G76110//AT1G15940//AtRLP17//anac021//AT1G72920//AT1G11300//AtRLP3//GAI//5PTASE13//GUN1//ARF3//anac036//AT2G36970//DSPTP1E//ATERF15//AT1G61490//AT1G61420//AT1G61500//ATCSLA07//AT2G42290//AtRLP19//AtPERK4//AL6//AT2G28780//ATPR1//ARA-4//ATMPK12//ARAC9//EMB2795//COI1//ATUTR1//AtRLP23
GO:0006479	protein methylation	BP	0.0596489291866532	AT3G56870//ACBP5//DDM2//MCM3//ATICMTA//CCS52B//AT4G29360//SNI1//EZA1//AT1G56210//FDM3//AT3G18600//CDC73//ATMSH1//AT3G23740//ATMSH7//emb1974//AT3G10310//PPK1//AT1G05950//AT1G63640//ATLSD1//AT1G13030//AT2G18330//AT2G22610//ATRPA2//AT2G01630//APC7//EMB2795
GO:0008213	protein alkylation	BP	0.0596489291866532	AT3G56870//ACBP5//DDM2//MCM3//ATICMTA//CCS52B//AT4G29360//SNI1//EZA1//AT1G56210//FDM3//AT3G18600//CDC73//ATMSH1//AT3G23740//ATMSH7//emb1974//AT3G10310//PPK1//AT1G05950//AT1G63640//ATLSD1//AT1G13030//AT2G18330//AT2G22610//ATRPA2//AT2G01630//APC7//EMB2795
GO:0051726	regulation of cell cycle	BP	0.0608349138298258	AT3G56870//NRPC1//MCM3//CCS52B//CYCD3;3//SGR7//SNI1//ANAC008//ATRBR1//AT3G20010//CYCP2;1//ATMSH1//AT3G23740//ATMSH7//AT3G03130//At-FANCM//AT1G10780//POLD3//ATRPN1A//ATE2FA//CKS1//APC10//ATRPA2//APC7//EMB2795
GO:0016571	histone methylation	BP	0.0615481195584594	AT3G56870//ACBP5//DDM2//MCM3//CCS52B//AT4G29360//SNI1//EZA1//AT1G56210//FDM3//AT3G18600//CDC73//ATMSH1//AT3G23740//ATMSH7//emb1974//AT3G10310//PPK1//AT1G05950//AT1G63640//ATLSD1//AT1G13030//AT2G18330//AT2G22610//ATRPA2//AT2G01630//APC7//EMB2795
GO:0034504	protein localization to nucleus	BP	0.0634711825138494	AT1G30240//AT1G26170//RANBP1//NRPA1//OLE1//AT4G02820//APUM24//AT3G12860//PPR596//AT1G11240//AT2G04050//AT1G60080//AT2G20720//AT2G40700
GO:0051170	nuclear import	BP	0.0634711825138494	AT1G30240//AT1G26170//RANBP1//NRPA1//OLE1//AT4G02820//APUM24//AT3G12860//PPR596//AT1G11240//AT2G04050//AT1G60080//AT2G20720//AT2G40700
GO:0008037	cell recognition	BP	0.0640258321737825	AT3G51710//AT4G27300//AT1G11300//AT1G61490//AT1G61420//AT1G61500
GO:0006913	nucleocytoplasmic transport	BP	0.0657955452474942	AT1G30240//AT1G26170//RANBP1//NRPA1//OLE1//AT4G02820//APUM24//AT3G12860//AT3G10090//AtNUP1//PPR596//AT1G11240//AT2G04050//AT1G60080//AT2G20720//AT2G40700//ARA-4
GO:0051169	nuclear transport	BP	0.0657955452474942	AT1G30240//AT1G26170//RANBP1//NRPA1//OLE1//AT4G02820//APUM24//AT3G12860//AT3G10090//AtNUP1//PPR596//AT1G11240//AT2G04050//AT1G60080//AT2G20720//AT2G40700//ARA-4
GO:0090329	regulation of DNA-dependent DNA replicat...	BP	0.0687303654460355	CCS52B//ATRBR1//APC10//APC7
GO:0009560	embryo sac egg cell differentiation	BP	0.0687837746879729	AT2G45460//ACBP5//NRPC1//AT5G17930//AT4G02820//AT3G12860//AT1G48580//AT1G11240//AtGLE1//AT2G05120//AT1G51380//AT2G18330//AT2G40700
GO:0008283	cell proliferation	BP	0.0699493969383416	RIP5//DDM2//MCM3//CCS52B//AT5G01290//CYCD3;3//AT4G29360//SNI1//CYP78A5//AT3G23740//ATMSH7//AT3G03130//UBC20//AtRLP17//AT1G14180//AT1G10780//ATE2FA//AT1G23790//APC10//ATRPA2//APC7//EMB2795
GO:0006298	mismatch repair	BP	0.0704972507499384	ATMSH1//ATMSH7//AT1G65070
GO:0006349	regulation of gene expression by genetic...	BP	0.0704972507499384	DDM2//EZA1//ATRBR1
GO:0071514	genetic imprinting	BP	0.0704972507499384	DDM2//EZA1//ATRBR1
GO:0010118	stomatal movement	BP	0.0760542311288089	AT5G64010//NPL1//CaS//PIP5K4//CBL5//ATB//AIT1//COI1
GO:0009909	regulation of flower development	BP	0.0789238910769235	CIB5//AT3G56870//AGL69//GATA21//DDM2//MCM3//OLE2//AGL25//ERL2//AtMYB17//AGL18//AT4G29360//CRC//OLE1//TSF//SNI1//ARF6//AT3G18600//CDC73//ATMSH7//PPK1//AT1G05950//AT1G63640//AT1G13030//AT2G18330//AT2G22610//ATRPA2//EMB2795//COI1