GOID TERM ONTOLOGY pValue Genes GO:0010647 positive regulation of cell communicatio... BP 0.000426125060927173 SNRK2-3//SNRK2-2//ATHM3//ATSPX3 GO:0009638 phototropism BP 0.00119104891092522 JK224//FHY2//PKS1 GO:0042364 water-soluble vitamin biosynthetic proce... BP 0.00298676686217052 AtGulLO3//PHS1//AtDJ1A//A37 GO:0006767 water-soluble vitamin metabolic process BP 0.00333699823524819 AtGulLO3//PHS1//AtDJ1A//A37 GO:0009110 vitamin biosynthetic process BP 0.00551119749472446 AtGulLO3//PHS1//AtDJ1A//A37 GO:0016998 cell wall macromolecule catabolic proces... BP 0.00637537096204796 AT3G47540//AtXTH31//AT2G43600 GO:0006525 arginine metabolic process BP 0.0137303095450734 DELTA-OAT//AT2G19940 GO:0009787 regulation of abscisic acid-activated si... BP 0.014295184150814 ATICMTB//SNRK2-3//SNRK2-2 GO:0048584 positive regulation of response to stimu... BP 0.0150868665652031 SNRK2-3//SNRK2-2//AtDJ1A//ATSPX3 GO:1901419 regulation of response to alcohol BP 0.0157328191080174 ATICMTB//SNRK2-3//SNRK2-2 GO:0043648 dicarboxylic acid metabolic process BP 0.0172489119145767 ATLOG9//DELTA-OAT//MDH GO:0009084 glutamine family amino acid biosynthetic... BP 0.0196581102013107 DELTA-OAT//AT2G19940 GO:0009789 positive regulation of abscisic acid-act... BP 0.0196581102013107 SNRK2-3//SNRK2-2 GO:0007602 phototransduction BP 0.0229545859929327 FHY2//PKS1 GO:0009585 red, far-red light phototransduction BP 0.0229545859929327 FHY2//PKS1 GO:1901421 positive regulation of response to alcoh... BP 0.0229545859929327 SNRK2-3//SNRK2-2 GO:0010646 regulation of cell communication BP 0.0239085931475516 ATICMTB//SNRK2-3//SNRK2-2//ATHM3//ATSPX3 GO:0005975 carbohydrate metabolic process BP 0.024831879722909 AT5G65950//BGLU41//AT5G42720//AT5G40020//AtGulLO3//SNRK2-2//MDH//AT3G47540//ATPHS2//ARA-3//UXS5//AT3G43220//AT4G29200//ATMEK1//MEE51//GATL6//GDPDL1//QQS//BGLU44//BGLU25//IBM1//AT2G43600//ATUGE1//ATPDI8//ATXTH27//ATGUT1//AT2G01630//BGLU15//KCS11 GO:0009583 detection of light stimulus BP 0.0264607000912012 FHY2//PKS1 GO:0019374 galactolipid metabolic process BP 0.0299110032834591 SQD1//MEE51//AtLPLAT1//ATSPX3 GO:0019375 galactolipid biosynthetic process BP 0.0299110032834591 SQD1//MEE51//AtLPLAT1//ATSPX3 GO:0009958 positive gravitropism BP 0.0301677124572589 MEL1//PKS1 GO:0006766 vitamin metabolic process BP 0.0329923706904263 AtGulLO3//PHS1//AtDJ1A//A37 GO:0009067 aspartate family amino acid biosynthetic... BP 0.0329923706904263 ATLOG9//IAA13//AT3G30300//ATPDI8 GO:0048583 regulation of response to stimulus BP 0.0334793671900549 ATICMTB//SNRK2-3//AT5G51910//DMR6//SNRK2-2//ATEDS1//ADT4//ATMEK1//BRCA2(IV)//AtDJ1A//AT3G04210//CRK3//ATSPX3//CKA3 GO:0009967 positive regulation of signal transducti... BP 0.034067130731081 SNRK2-3//SNRK2-2 GO:0023056 positive regulation of signaling BP 0.034067130731081 SNRK2-3//SNRK2-2 GO:0006082 organic acid metabolic process BP 0.0347791931112111 ATLOG9//COBL5//AHA3//ATUSP//DELTA-OAT//DMR6//AtGulLO3//AT3G61540//SNRK2-2//ATEDS1//MDH//ATIVD//ADT4//AT3G44740//SQD1//ATMEK1//AT4G13050//MEE51//IAA13//AT3G30300//AtDJ1A//ATPME3//BUL1//AT1G71870//ATPDI8//AT1G21670//AIR3//AT2G16710//AT2G19940//CYP86A8//KCS11 GO:0043436 oxoacid metabolic process BP 0.0347791931112111 ATLOG9//COBL5//AHA3//ATUSP//DELTA-OAT//DMR6//AtGulLO3//AT3G61540//SNRK2-2//ATEDS1//MDH//ATIVD//ADT4//AT3G44740//SQD1//ATMEK1//AT4G13050//MEE51//IAA13//AT3G30300//AtDJ1A//ATPME3//BUL1//AT1G71870//ATPDI8//AT1G21670//AIR3//AT2G16710//AT2G19940//CYP86A8//KCS11 GO:0009247 glycolipid biosynthetic process BP 0.037950246364287 SQD1//MEE51//AtLPLAT1//ATSPX3 GO:0010359 regulation of anion channel activity BP 0.0381507041536226 JK224//BGLU15 GO:1903959 regulation of anion transmembrane transp... BP 0.0381507041536226 JK224//BGLU15 GO:0044238 primary metabolic process BP 0.0388091169941655 AT4G17470//AT1G25320//ATICMTB//AT4G37250//ATLOG9//CYP714A1//SNRK2-3//AT5G66520//AT5G65950//AGL42//AHA3//BGLU41//ATUSP//AT5G51910//DELTA-OAT//AT5G42720//AT5G40020//AT5G38290//SCPL34//AtGulLO3//AT5G05090//AT3G61540//ASK5//AT3G57600//AT3G57470//SNRK2-2//AT3G48440//ATEDS1//MDH//AT3G47540//CDF3//PHS1//AT3G47070//ATPHS2//ARA-3//AT3G46370//UXS5//ATMYB48//JK224//CRK4//ATIVD//AT3G45430//DOF6//ATHD2A//AT3G44620//AT3G44630//ADT4//AT3G44740//AT3G43220//SQD1//AT4G32800//AT4G29200//DER1//HSP21//ATMEK1//AT4G25280//CRK5//UND//AT4G13050//AT4G05310//MEE51//GATL6//BRCA2(IV)//AT1G25550//IAA13//GDPDL1//AtLPLAT1//DLAH//AT3G30300//QQS//AtDJ1A//AT3G20340//ATWNK6//AtMAD2//BGLU44//A37//ATPME3//BUL1//AT3G07340//BGLU25//IBM1//ATHB20//CRK3//UPB1//AT2G43600//ATUGE1//AT1G71870//EPR1//ATPDI8//ATGSTF5//AT1G28600//AIR3//ATXTH27//ATHAC1//ATGUT1//FHY2//BIP3//AT2G20970//ATLPP1//AT2G01790//AT2G01630//AT2G42330//ATSPX3//POL2B//AT2G19940//PKS1//AT2G26920//CYP86A8//CKA3//BGLU15//KCS11 GO:0009610 response to symbiotic fungus BP 0.0424104176269604 AtLPLAT1//AT1G13230 GO:0022898 regulation of transmembrane transporter ... BP 0.0424104176269604 JK224//BGLU15 GO:0032409 regulation of transporter activity BP 0.0424104176269604 JK224//BGLU15 GO:0032412 regulation of ion transmembrane transpor... BP 0.0424104176269604 JK224//BGLU15 GO:0034762 regulation of transmembrane transport BP 0.0424104176269604 JK224//BGLU15 GO:0034765 regulation of ion transmembrane transpor... BP 0.0424104176269604 JK224//BGLU15 GO:0051606 detection of stimulus BP 0.0441300086147951 DMR6//ATEDS1//ATMEK1//FHY2//PKS1 GO:0009292 genetic transfer BP 0.0468384859094462 ATHD2A//ATHAC1 GO:0009294 DNA mediated transformation BP 0.0468384859094462 ATHD2A//ATHAC1 GO:0009608 response to symbiont BP 0.0468384859094462 AtLPLAT1//AT1G13230 GO:0006664 glycolipid metabolic process BP 0.0471128996073825 SQD1//MEE51//AtLPLAT1//ATSPX3 GO:0009066 aspartate family amino acid metabolic pr... BP 0.0471128996073825 ATLOG9//IAA13//AT3G30300//ATPDI8 GO:0010218 response to far red light BP 0.0471128996073825 AT3G47070//JK224//FHY2//PKS1 GO:0048440 carpel development BP 0.0483470434795062 AGL42//AT3G57600//ADT4//AT3G44740//AT2G20970//AT2G19940 GO:0044281 small molecule metabolic process BP 0.0485949181165076 ATLOG9//CYP714A1//COBL5//AHA3//ATUSP//DELTA-OAT//DMR6//AtGulLO3//AT3G61540//SNRK2-2//ATEDS1//MDH//PHS1//UXS5//ATIVD//ATHD2A//ADT4//AT3G44740//AT3G43220//SQD1//ATMEK1//AT4G25280//AT4G13050//MEE51//IAA13//GDPDL1//AT3G30300//AtDJ1A//A37//ATPME3//BUL1//AT1G71870//ATPDI8//AT1G21670//AIR3//AT2G16710//ATHM3//AT2G19940//CYP86A8//KCS11 GO:0010114 response to red light BP 0.0490802921811354 AT3G47070//JK224//FHY2//PKS1 GO:1903509 liposaccharide metabolic process BP 0.0490802921811354 SQD1//MEE51//AtLPLAT1//ATSPX3 GO:0009582 detection of abiotic stimulus BP 0.0514273479429544 FHY2//PKS1 GO:0071704 organic substance metabolic process BP 0.0517578415798532 AT4G17470//AT1G25320//ATICMTB//AT4G37250//ATLOG9//CYP714A1//SNRK2-3//AT5G66520//AT5G65950//AGL42//COBL5//AHA3//BGLU41//ATUSP//AT5G51910//DELTA-OAT//AT5G42720//AT5G40020//AT5G38290//DMR6//SCPL34//AtGulLO3//AT5G05090//AT3G61540//ASK5//AT3G57600//AT3G57470//AT3G51440//SNRK2-2//AT3G48440//ATEDS1//MDH//AT3G47540//CDF3//PHS1//AT3G47070//ATPHS2//ARA-3//AT3G46370//UXS5//ATMYB48//JK224//CRK4//ATIVD//AT3G45430//DOF6//AtXTH31//ATHD2A//AT3G44620//AT3G44630//ADT4//AT3G44740//AT3G43220//SQD1//AT4G32800//AT4G29200//DER1//HSP21//ATMEK1//AT4G25280//CRK5//UND//AT4G13050//AT4G05310//MEE51//GATL6//BRCA2(IV)//AT1G25550//IAA13//GDPDL1//AtLPLAT1//DLAH//AT3G30300//QQS//AtDJ1A//AT3G20340//ATWNK6//AtMAD2//BGLU44//A37//ATPME3//BUL1//AT3G07340//BGLU25//IBM1//ATHB20//CRK3//UPB1//AT2G43600//ATUGE1//AT1G71870//EPR1//ATPDI8//ATGSTF5//AT1G21670//AT1G28600//AIR3//ATXTH27//ATHAC1//ATGUT1//FHY2//BIP3//AT2G16710//AT2G20970//ATHM3//ATLPP1//AT2G01790//AT2G01630//AT2G42330//ATSPX3//POL2B//AT2G19940//PKS1//AT2G26920//CYP86A8//CKA3//BGLU15//KCS11 GO:0009642 response to light intensity BP 0.0520716198439069 PHS1//JK224//DER1//HSP21//A37//FHY2//BIP3 GO:0016036 cellular response to phosphate starvatio... BP 0.0573966411084904 SQD1//MEE51//AtLPLAT1//ATSPX3 GO:0009644 response to high light intensity BP 0.0599287376052975 PHS1//JK224//DER1//HSP21//A37//BIP3 GO:0048467 gynoecium development BP 0.0599287376052975 AGL42//AT3G57600//ADT4//AT3G44740//AT2G20970//AT2G19940 GO:0050896 response to stimulus BP 0.060110297546034 AT1G25320//ATICMTB//AT4G37250//SNRK2-3//AGL42//COBL5//AT5G57510//ATSGP1//AT5G54050//ATUSP//AT5G51910//DELTA-OAT//AT5G40020//DMR6//SNRK2-2//HR4//ATEDS1//MDH//PHS1//AT3G47070//ATPHS2//RPP13//ARA-3//AT3G46370//UXS5//ATMYB48//JK224//CRK4//ATIVD//ATMLO3//AT3G44630//ADT4//AT3G43740//AT4G38860//MEL1//ATSEN1//SQD1//DER1//HSP21//ATMEK1//CRK5//AT4G05310//MEE51//AT4G03156//BRCA2(IV)//AT1G25550//IAA13//AtLPLAT1//AT1G58220//ATEXO70E1//PCC1//ATEXO70D3//AtDJ1A//AT3G20340//AtMAD2//A37//ATPME3//AT3G04210//IBM1//ATHB20//ACAM-4//CRK3//AT1G71870//EPR1//ZIP10//AT1G13230//AIR3//ATHAC1//ABCC5//FHY2//BIP3//ATLPP1//ATSPX3//AT2G14900//AT2G19940//PKS1//CKA3//KCS11 GO:0009225 nucleotide-sugar metabolic process BP 0.061058296813489 ATUSP//UXS5 GO:0042732 D-xylose metabolic process BP 0.061058296813489 ARA-3//UXS5 GO:0080134 regulation of response to stress BP 0.0642554944439605 AT5G51910//DMR6//ATEDS1//ADT4//ATMEK1//BRCA2(IV)//AtDJ1A//AT3G04210//CRK3//ATSPX3//CKA3 GO:0051716 cellular response to stimulus BP 0.0659143805060767 AT1G25320//ATICMTB//AT4G37250//SNRK2-3//AT5G57510//ATSGP1//AT5G54050//DELTA-OAT//DMR6//SNRK2-2//ATEDS1//RPP13//ARA-3//AT3G46370//JK224//AT3G44630//ADT4//AT3G43740//SQD1//DER1//ATMEK1//AT4G05310//MEE51//AT4G03156//BRCA2(IV)//AtLPLAT1//ATEXO70D3//AtDJ1A//A37//AT3G04210//IBM1//ACAM-4//ZIP10//AT1G13230//FHY2//BIP3//ATSPX3//PKS1//CKA3 GO:0006904 vesicle docking involved in exocytosis BP 0.066086333189683 ATEXO70E1//ATEXO70D3 GO:0009064 glutamine family amino acid metabolic pr... BP 0.066086333189683 DELTA-OAT//AT2G19940 GO:0034220 ion transmembrane transport BP 0.0663553109346617 AHA3//ATCHX27//JK224//ZIP10//BGLU15 GO:0008219 cell death BP 0.0700422963234635 DELTA-OAT//DMR6//ATEDS1//RPP13//CRK4//ATMLO3//ADT4//ATMEK1//CRK5//UND GO:0016265 death BP 0.0700422963234635 DELTA-OAT//DMR6//ATEDS1//RPP13//CRK4//ATMLO3//ADT4//ATMEK1//CRK5//UND GO:0006662 glycerol ether metabolic process BP 0.0712470519294931 ATPDI8//ATHM3 GO:0018904 ether metabolic process BP 0.0712470519294931 ATPDI8//ATHM3 GO:0048278 vesicle docking BP 0.0712470519294931 ATEXO70E1//ATEXO70D3 GO:0009605 response to external stimulus BP 0.071308191554568 AGL42//COBL5//DELTA-OAT//AT5G40020//DMR6//HR4//ATEDS1//RPP13//JK224//CRK4//ADT4//MEL1//SQD1//ATMEK1//CRK5//MEE51//AtLPLAT1//ATEXO70E1//PCC1//ATPME3//AT3G04210//ACAM-4//CRK3//ZIP10//AT1G13230//FHY2//ATSPX3//PKS1//CKA3 GO:0009267 cellular response to starvation BP 0.0730313690150165 SQD1//ATMEK1//MEE51//AtLPLAT1//ZIP10//ATSPX3 GO:0042542 response to hydrogen peroxide BP 0.0742503685507278 DER1//HSP21//ATMEK1//A37//BIP3 GO:0022406 membrane docking BP 0.0765339322276792 ATEXO70E1//ATEXO70D3 GO:0044070 regulation of anion transport BP 0.0765339322276792 JK224//BGLU15 GO:0042594 response to starvation BP 0.0765446690980021 SQD1//ATMEK1//MEE51//AtLPLAT1//ZIP10//ATSPX3 GO:0001666 response to hypoxia BP 0.0767725109740205 AT5G57510//DMR6//ATEDS1 GO:0019752 carboxylic acid metabolic process BP 0.0770634405803528 ATLOG9//COBL5//ATUSP//DELTA-OAT//DMR6//AtGulLO3//AT3G61540//SNRK2-2//ATEDS1//MDH//ATIVD//ADT4//AT3G44740//ATMEK1//AT4G13050//MEE51//IAA13//AT3G30300//AtDJ1A//ATPME3//BUL1//AT1G71870//ATPDI8//AT1G21670//AT2G16710//AT2G19940//CYP86A8//KCS11 GO:0010260 organ senescence BP 0.0801506048197574 AGL42//DELTA-OAT//AtLPLAT1 GO:0012501 programmed cell death BP 0.0801728790908248 DELTA-OAT//DMR6//ATEDS1//RPP13//CRK4//ADT4//ATMEK1//CRK5//UND GO:0006887 exocytosis BP 0.0819406460440628 ATEXO70E1//ATEXO70D3 GO:0006790 sulfur compound metabolic process BP 0.0854920559241304 AHA3//AT3G61540//SQD1//ATMEK1//IAA13//AT3G30300//AtDJ1A//BUL1//ATPDI8//AIR3//KCS11 GO:1901566 organonitrogen compound biosynthetic pro... BP 0.086155685149947 ATLOG9//AHA3//DELTA-OAT//AT5G38290//AT3G61540//AT3G51440//PHS1//ATHD2A//ADT4//IAA13//AT3G30300//AtDJ1A//A37//ATPME3//ATPDI8//AT2G19940 GO:0009637 response to blue light BP 0.0865274044055209 AT3G47070//JK224//FHY2//PKS1 GO:0046467 membrane lipid biosynthetic process BP 0.0865274044055209 SQD1//MEE51//AtLPLAT1//ATSPX3 GO:0007264 small GTPase mediated signal transductio... BP 0.0870966617234435 ATSGP1//ARA-3//AT4G03156 GO:0009086 methionine biosynthetic process BP 0.0870966617234435 IAA13//AT3G30300//ATPDI8 GO:0036293 response to decreased oxygen levels BP 0.0870966617234435 AT5G57510//DMR6//ATEDS1 GO:0016053 organic acid biosynthetic process BP 0.0898846858939763 ATLOG9//COBL5//DELTA-OAT//DMR6//AtGulLO3//AT3G61540//ATEDS1//ADT4//ATMEK1//AT4G13050//IAA13//AT3G30300//ATPME3//BUL1//ATPDI8//AT2G19940//KCS11 GO:0046394 carboxylic acid biosynthetic process BP 0.0898846858939763 ATLOG9//COBL5//DELTA-OAT//DMR6//AtGulLO3//AT3G61540//ATEDS1//ADT4//ATMEK1//AT4G13050//IAA13//AT3G30300//ATPME3//BUL1//ATPDI8//AT2G19940//KCS11 GO:0070482 response to oxygen levels BP 0.0906622702077962 AT5G57510//DMR6//ATEDS1 GO:0044272 sulfur compound biosynthetic process BP 0.0928606753155397 AHA3//AT3G61540//SQD1//ATMEK1//IAA13//AT3G30300//AtDJ1A//ATPDI8//AIR3 GO:0010017 red or far-red light signaling pathway BP 0.093089197057741 FHY2//PKS1 GO:0071489 cellular response to red or far red ligh... BP 0.093089197057741 FHY2//PKS1 GO:0031669 cellular response to nutrient levels BP 0.0935186488341221 SQD1//ATMEK1//MEE51//AtLPLAT1//ZIP10//ATSPX3 GO:0007568 aging BP 0.0947489922233181 AGL42//DELTA-OAT//ATSEN1//AtLPLAT1 GO:0006555 methionine metabolic process BP 0.0979726178578565 IAA13//AT3G30300//ATPDI8 GO:0045454 cell redox homeostasis BP 0.0979726178578565 ATPDI8//ATHM3//AT2G30540 GO:0006520 cellular amino acid metabolic process BP 0.101334274269679 ATLOG9//DELTA-OAT//AT3G61540//ATIVD//ADT4//AT3G44740//IAA13//AT3G30300//AtDJ1A//ATPME3//ATPDI8//AT2G19940 GO:1901605 alpha-amino acid metabolic process BP 0.10255527338234 ATLOG9//DELTA-OAT//AT3G61540//ATIVD//ADT4//IAA13//AT3G30300//ATPME3//ATPDI8//AT2G19940 GO:0044283 small molecule biosynthetic process BP 0.102618106456609 ATLOG9//CYP714A1//COBL5//DELTA-OAT//DMR6//AtGulLO3//AT3G61540//ATEDS1//PHS1//ADT4//ATMEK1//AT4G13050//IAA13//AT3G30300//AtDJ1A//A37//ATPME3//BUL1//ATPDI8//AT2G19940//KCS11