GOID	TERM	ONTOLOGY	pValue	Genes
GO:0009808	lignin metabolic process	BP	0.000763752170152923	LAC16//AT5G58490//ATCAD5//AtMYB103//AT2G41480
GO:0045036	protein targeting to chloroplast	BP	0.00782205558230616	SVR7//AT4G15810//cpHsc70-2//ATTOC159
GO:0072596	establishment of protein localization to...	BP	0.00782205558230616	SVR7//AT4G15810//cpHsc70-2//ATTOC159
GO:0072598	protein localization to chloroplast	BP	0.00782205558230616	SVR7//AT4G15810//cpHsc70-2//ATTOC159
GO:0009809	lignin biosynthetic process	BP	0.0106517276116098	AT5G58490//ATCAD5//AtMYB103
GO:0009698	phenylpropanoid metabolic process	BP	0.0116559447059109	AT5G24760//LAC16//AT5G58490//ATCAD5//AtMYB103//AT2G41480
GO:0048527	lateral root development	BP	0.0156119652870463	AT5G43520//ASA1//SNRK2-10//AT1G47485//CHD3
GO:0015914	phospholipid transport	BP	0.0182005680375582	AT1G26130//AT1G72700
GO:0048528	post-embryonic root development	BP	0.020055342768434	AT5G43520//ASA1//SNRK2-10//AT1G47485//CHD3
GO:0010229	inflorescence development	BP	0.0330363386566523	HEMG2//ASA1
GO:0051130	positive regulation of cellular componen...	BP	0.0352438548795186	AT5G12350//ALX8//SEC5A//chr13//AT1G50660
GO:0007155	cell adhesion	BP	0.0366610968090858	LecRK-I.9//SEC5A//chr13//AT1G50660
GO:0022610	biological adhesion	BP	0.0366610968090858	LecRK-I.9//SEC5A//chr13//AT1G50660
GO:0015824	proline transport	BP	0.0442343072277628	AT5G04610//AT3G47380//ATCAD5
GO:0000041	transition metal ion transport	BP	0.0453153350698978	ATNRAMP4//AT5G43520//AT3G62270//UNE11//CYP87A2//AT2G41480
GO:0009699	phenylpropanoid biosynthetic process	BP	0.0481891287126889	AT5G24760//AT5G58490//ATCAD5//AtMYB103
GO:0015804	neutral amino acid transport	BP	0.0498114881874025	AT5G04610//AT3G47380//ATCAD5
GO:0006346	methylation-dependent chromatin silencin...	BP	0.0591574517014765	ATHMG//AT1G05440//CHD3//AT2G07170
GO:0045892	negative regulation of transcription, DN...	BP	0.0594350656253424	ALX8//DPA4//AT4G27270//ATHMG//AT3G03790//AT1G05440//CHD3//AT2G07170
GO:1902679	negative regulation of RNA biosynthetic ...	BP	0.0594350656253424	ALX8//DPA4//AT4G27270//ATHMG//AT3G03790//AT1G05440//CHD3//AT2G07170
GO:1903507	negative regulation of nucleic acid-temp...	BP	0.0594350656253424	ALX8//DPA4//AT4G27270//ATHMG//AT3G03790//AT1G05440//CHD3//AT2G07170
GO:0051253	negative regulation of RNA metabolic pro...	BP	0.0607259702413701	ALX8//DPA4//AT4G27270//ATHMG//AT3G03790//AT1G05440//CHD3//AT2G07170
GO:0048469	cell maturation	BP	0.0619182033934563	AT5G43520//SEC5A//RALFL27//chr13//AT1G50660//AT2G04680
GO:0048764	trichoblast maturation	BP	0.0619182033934563	AT5G43520//SEC5A//RALFL27//chr13//AT1G50660//AT2G04680
GO:0048765	root hair cell differentiation	BP	0.0619182033934563	AT5G43520//SEC5A//RALFL27//chr13//AT1G50660//AT2G04680
GO:0048364	root development	BP	0.0633418980102478	AT5G43520//SEC5A//RALFL27//chr13//ASA1//SNRK2-10//AT1G50660//AT1G47485//AT2G04680//CHD3
GO:0016192	vesicle-mediated transport	BP	0.0644807451188575	ATGRIP//AT5G23550//AT5G11560//AT4G34450//AT4G11380//ATSYP24//ADL3//AT1G27530//AT1G05020//AT2G07170
GO:0022622	root system development	BP	0.0644807451188575	AT5G43520//SEC5A//RALFL27//chr13//ASA1//SNRK2-10//AT1G50660//AT1G47485//AT2G04680//CHD3
GO:0045934	negative regulation of nucleobase-contai...	BP	0.0647042511656164	ALX8//DPA4//AT4G27270//ATHMG//AT3G03790//AT1G05440//CHD3//AT2G07170
GO:0009846	pollen germination	BP	0.0665887136553015	SEC5A//SEC5B
GO:0051172	negative regulation of nitrogen compound...	BP	0.0674447298800386	ALX8//DPA4//AT4G27270//ATHMG//AT3G03790//AT1G05440//CHD3//AT2G07170
GO:0044087	regulation of cellular component biogene...	BP	0.068809331863849	SEC5A//chr13//AtMYB103//AT1G50660
GO:0010558	negative regulation of macromolecule bio...	BP	0.070256081680938	ALX8//DPA4//AT4G27270//ATHMG//AT3G03790//AT1G05440//CHD3//AT2G07170
GO:2000113	negative regulation of cellular macromol...	BP	0.070256081680938	ALX8//DPA4//AT4G27270//ATHMG//AT3G03790//AT1G05440//CHD3//AT2G07170
GO:0021700	developmental maturation	BP	0.0705145066777509	AT5G43520//SEC5A//RALFL27//chr13//AT1G50660//AT2G04680
GO:0031327	negative regulation of cellular biosynth...	BP	0.0775953920754727	ALX8//DPA4//AT4G27270//ATHMG//AT3G03790//AT1G05440//CHD3//AT2G07170
GO:0010565	regulation of cellular ketone metabolic ...	BP	0.0776101069862269	ALX8//EOL2
GO:0015980	energy derivation by oxidation of organi...	BP	0.0792220559306175	AOX2//AT3G55410//AT4G02580//AMY2
GO:0009890	negative regulation of biosynthetic proc...	BP	0.0806556536003732	ALX8//DPA4//AT4G27270//ATHMG//AT3G03790//AT1G05440//CHD3//AT2G07170
GO:0007267	cell-cell signaling	BP	0.08240469592363	RALFL27//ATHMG//RALFL25
GO:0010048	vernalization response	BP	0.08240469592363	AT5G01670//AGL19//AT3G08620
GO:0055114	oxidation-reduction process	BP	0.0827315160210844	ATCKX1//AT5G24760//YUC10//AOX2//LAC16//AT5G45180//AT5G43520//HEMG2//ATGA20OX3//PRX52//AT5G01670//AT3G55890//AT3G55410//CYP81D3//ATCAD5//AT4G02580//CYP87A2//YUC11//AMY2//ATILP1//AT2G04680//KAT1
GO:0009834	plant-type secondary cell wall biogenesi...	BP	0.083320998332116	GUT1//AtMYB103
GO:0046907	intracellular transport	BP	0.0841188026112953	SVR7//AT4G15810//ATGRIP//VTC5//cpHsc70-2//AT5G11560//AT3G47380//AT4G34450//ATCAD5//AT4G26020//AT4G11380//ATTOC159//AT1G76360//ATSYP24//AT1G48440//AT1G27530//ATILP1//AT2G07170
GO:0006270	DNA replication initiation	BP	0.0860674977577885	AT1G05440//AT2G07170//MCM5
GO:0010054	trichoblast differentiation	BP	0.0896700706880478	AT5G43520//SEC5A//RALFL27//chr13//AT1G50660//AT2G04680
GO:0006275	regulation of DNA replication	BP	0.0903722773167734	ATPCNA1//AT1G05440//AT2G07170//MCM5
GO:0010638	positive regulation of organelle organiz...	BP	0.0992021268540628	AT5G12350//SEC5A//chr13//AT1G50660
GO:0009630	gravitropism	BP	0.102231797711777	AT5G12350//ATGRIP//RLT2//AT4G11380
GO:0010053	root epidermal cell differentiation	BP	0.102398516748794	AT5G43520//SEC5A//RALFL27//chr13//AT1G50660//AT2G04680
GO:0090627	plant epidermal cell differentiation	BP	0.104608019599734	AT5G43520//SEC5A//RALFL27//chr13//AT1G50660//AT2G04680
GO:0072329	monocarboxylic acid catabolic process	BP	0.107005896216571	ATGA20OX3//DPA4//AT3G55890//ATILP1//KAT1
GO:0007067	mitotic nuclear division	BP	0.107336486835857	RAD23D//APD1
GO:0051649	establishment of localization in cell	BP	0.110338690957993	SVR7//AT4G15810//ATGRIP//VTC5//cpHsc70-2//AT5G11560//AT3G47380//AT4G34450//ATCAD5//AT4G26020//AT4G11380//ATTOC159//AT1G76360//ATSYP24//ATSYTB//AT1G48440//AT1G27530//ATILP1//AT2G07170
GO:0006261	DNA-dependent DNA replication	BP	0.111572566088521	ATPCNA1//AT1G05440//AT2G07170//MCM5
GO:0009606	tropism	BP	0.114768219375637	AT5G12350//ATGRIP//RLT2//AT4G11380
GO:0009629	response to gravity	BP	0.118003945714048	AT5G12350//ATGRIP//RLT2//AT4G11380
GO:0010015	root morphogenesis	BP	0.120753350285483	AT5G43520//SEC5A//RALFL27//chr13//ASA1//AT1G50660//AT2G04680
GO:0071554	cell wall organization or biogenesis	BP	0.12798559834236	ATCKX1//AT5G12350//GUT1//ATGRP-8//AT3G62270//AT3G55890//MOS1//SEC5A//chr13//AtMYB103//ATSYP24//AT1G50660//AT2G41480//AT2G19150
GO:0034655	nucleobase-containing compound catabolic...	BP	0.130540218178262	ALX8//MOS1//AT4G04880
GO:0006855	drug transmembrane transport	BP	0.132920459867352	AT1G71140//AT1G64820
GO:0009804	coumarin metabolic process	BP	0.132920459867352	AT5G24760//ATCAD5
GO:0009805	coumarin biosynthetic process	BP	0.132920459867352	AT5G24760//ATCAD5
GO:0009694	jasmonic acid metabolic process	BP	0.13476254780601	ALX8//LecRK-I.9//VTC5//JAS1
GO:0015893	drug transport	BP	0.13951736863504	AT1G71140//AT1G64820
GO:0042493	response to drug	BP	0.13951736863504	AT1G71140//AT1G64820
GO:0030243	cellulose metabolic process	BP	0.148376346436172	ATGRIP//AT3G62270//AT4G11380
GO:0048522	positive regulation of cellular process	BP	0.149748861089393	AT5G12350//SVR7//ATNRAMP4//ALX8//LSU2//GATA3//SEC5A//chr13//AtMYB103//AT1G02700//AT1G50660
GO:0009060	aerobic respiration	BP	0.15291467134122	AOX2//AT3G55410
GO:0030838	positive regulation of actin filament po...	BP	0.152953934078244	SEC5A//chr13//AT1G50660
GO:0031334	positive regulation of protein complex a...	BP	0.152953934078244	SEC5A//chr13//AT1G50660
GO:0032273	positive regulation of protein polymeriz...	BP	0.152953934078244	SEC5A//chr13//AT1G50660
GO:0045010	actin nucleation	BP	0.152953934078244	SEC5A//chr13//AT1G50660
GO:0051495	positive regulation of cytoskeleton orga...	BP	0.152953934078244	SEC5A//chr13//AT1G50660
GO:0009888	tissue development	BP	0.154068483834621	ATCKX1//AT5G12350//AT5G43520//DPA4//ABCG18//AGL19//SEC5A//RALFL27//ATHMG//chr13//ATMYB90//AT1G50660//AT2G04680//ATWRKY10//AT2G19970
GO:0031324	negative regulation of cellular metaboli...	BP	0.156419804735198	ALX8//DPA4//AT4G27270//ATHMG//AT3G03790//AT1G05440//CHD3//AT2G07170
GO:0009686	gibberellin biosynthetic process	BP	0.159705019542861	ATGA20OX3//ATMYB90
GO:0016129	phytosteroid biosynthetic process	BP	0.159705019542861	AT1G05440//AT2G04680
GO:0010228	vegetative to reproductive phase transit...	BP	0.161939222090204	ALX8//RLT2//CDKC;1//AT5G01670//ATHMG//chr13
GO:0008064	regulation of actin polymerization or de...	BP	0.162240765633579	SEC5A//chr13//AT1G50660
GO:0030832	regulation of actin filament length	BP	0.162240765633579	SEC5A//chr13//AT1G50660
GO:0030833	regulation of actin filament polymerizat...	BP	0.162240765633579	SEC5A//chr13//AT1G50660
GO:0032271	regulation of protein polymerization	BP	0.162240765633579	SEC5A//chr13//AT1G50660
GO:0032956	regulation of actin cytoskeleton organiz...	BP	0.162240765633579	SEC5A//chr13//AT1G50660
GO:0032970	regulation of actin filament-based proce...	BP	0.162240765633579	SEC5A//chr13//AT1G50660
GO:0043254	regulation of protein complex assembly	BP	0.162240765633579	SEC5A//chr13//AT1G50660
GO:0044089	positive regulation of cellular componen...	BP	0.162240765633579	SEC5A//chr13//AT1G50660
GO:0015748	organophosphate ester transport	BP	0.166550079773983	AT1G26130//AT1G72700
GO:0016102	diterpenoid biosynthetic process	BP	0.166550079773983	ATGA20OX3//ATMYB90
GO:0019932	second-messenger-mediated signaling	BP	0.166550079773983	ALX8//scpl29
GO:0030041	actin filament polymerization	BP	0.166946992755873	SEC5A//chr13//AT1G50660
GO:0051493	regulation of cytoskeleton organization	BP	0.171693092397632	SEC5A//chr13//AT1G50660
GO:0016128	phytosteroid metabolic process	BP	0.173445239329825	AT1G05440//AT2G04680
GO:0048439	flower morphogenesis	BP	0.173445239329825	ATHMG//SRS5
GO:0002229	defense response to oomycetes	BP	0.177254967913653	626_
GO:0005986	sucrose biosynthetic process	BP	0.177254967913653	746_
GO:0010112	regulation of systemic acquired resistan...	BP	0.177254967913653	292_
GO:0019852	L-ascorbic acid metabolic process	BP	0.177254967913653	091_
GO:0019853	L-ascorbic acid biosynthetic process	BP	0.177254967913653	091_
GO:0051052	regulation of DNA metabolic process	BP	0.178531802503001	ATPCNA1//AT1G05440//AT2G07170//MCM5