GOID TERM ONTOLOGY pValue Genes GO:0019321 pentose metabolic process BP 0.00447448759949944 ARA1//AT5G51830//AT3G54130//ATF2KP//AT1G06020 GO:0032940 secretion by cell BP 0.0144497918076771 HCF106//ATEXO70A2//ATEXO70H1//ATRAB6A GO:0046903 secretion BP 0.0144497918076771 HCF106//ATEXO70A2//ATEXO70H1//ATRAB6A GO:0005985 sucrose metabolic process BP 0.0163656761472703 ATSUS2//ATSPP1//AT1G06020 GO:0010374 stomatal complex development BP 0.0195885706312526 HCF106//AtTIR1//AT3G57370//RIC7//ATLFNR2//ATHPP2C5//MEE65//COI1//ER GO:0010229 inflorescence development BP 0.0262816461741441 YUC//ER//SPL3 GO:0010103 stomatal complex morphogenesis BP 0.0265936079378461 HCF106//AtTIR1//RIC7//ATLFNR2//COI1//ER GO:0048878 chemical homeostasis BP 0.0324233691029406 C2H2//ATBZIP9//ATNRAMP4//ATCHX18//ATSNX1//CBB3//AT3G61010//ATGLR3.2//CYP71B7//ATMTP11 GO:0098771 inorganic ion homeostasis BP 0.0385048855463664 C2H2//ATNRAMP4//ATCHX18//AT3G61010//ATGLR3.2//ATMTP11 GO:0032957 inositol trisphosphate metabolic process BP 0.0387549242717499 BST1//AtMTM2//AT4G33770 GO:0009886 post-embryonic morphogenesis BP 0.0416375464274514 AT5G25475//HEN4//HCF106//CBB3//AtTIR1//RIC7//AT3G52270//BT3//REM22//COBL1//ATLFNR2//AT1G63640//AIR9//COI1//ER//SPL3 GO:0046916 cellular transition metal ion homeostasi... BP 0.0459294452518423 ATNRAMP4//AT3G61010//ATMTP11 GO:0010118 stomatal movement BP 0.0474297732783876 HMA7//ATVAMP711//NLP7//COI1 GO:0007166 cell surface receptor signaling pathway BP 0.0493630402951898 FLS2//AT5G06550//SRF2//AT1G74360//AT1G64210//AT2G24130 GO:0006511 ubiquitin-dependent protein catabolic pr... BP 0.0505933694848807 ATECI2//AT5G53360//ATUBC4//UCH1//ATSNX1//AtTIR1//ASK5//AtCAL2//UBP18//AT4G04690//AT1G65170//ATUBC2-1//ATSKP2;2//COI1 GO:0009555 pollen development BP 0.0514483075820685 COPT1//IMPA-8//anac095//CBB3//AtTIR1//AGL18//MS5//BT3//ATGSL06//AGL22//AGL30 GO:0019941 modification-dependent protein catabolic... BP 0.0526961244499345 ATECI2//AT5G53360//ATUBC4//UCH1//ATSNX1//AtTIR1//ASK5//AtCAL2//UBP18//AT4G04690//AT1G65170//ATUBC2-1//ATSKP2;2//COI1 GO:0043632 modification-dependent macromolecule cat... BP 0.0526961244499345 ATECI2//AT5G53360//ATUBC4//UCH1//ATSNX1//AtTIR1//ASK5//AtCAL2//UBP18//AT4G04690//AT1G65170//ATUBC2-1//ATSKP2;2//COI1 GO:0007167 enzyme linked receptor protein signaling... BP 0.057551069233557 FLS2//SRF2//AT1G74360//AT1G64210//AT2G24130 GO:0007169 transmembrane receptor protein tyrosine ... BP 0.057551069233557 FLS2//SRF2//AT1G74360//AT1G64210//AT2G24130 GO:0043647 inositol phosphate metabolic process BP 0.057551069233557 BST1//AtMTM2//AT5G01300//AT4G33770//ATMTP11 GO:0005996 monosaccharide metabolic process BP 0.0590446365867503 ARA1//AT5G51830//14-3-3lambda//AT3G54130//AT3G47800//ATF2KP//UKL2//CP12//AT1G06020//PP2A-1 GO:0006875 cellular metal ion homeostasis BP 0.0592793535935523 ATNRAMP4//AT3G61010//ATGLR3.2//ATMTP11 GO:0048569 post-embryonic organ development BP 0.0636279427772032 HEN4//CBB3//AtMTM2//AtTIR1//SPL15//AGL18//RIC7//AT3G52270//BT3//REM22//COBL1//SEU//AT1G63640//ATHPP2C5//AGL22//ATSKP2;2//GLY1//AIR9//COI1//SPL3 GO:0048831 regulation of shoot system development BP 0.0665815001290238 AtELP3//AT5G06550//CBB3//AGL18//YUC//COBL1//HTA9//SEU//ATUBC2-1//AT1G63640//ASIL1//AGL22//COI1//SPL3 GO:0042592 homeostatic process BP 0.0670801049721743 AT4G15680//ATMSH4//AT4G15700//C2H2//ATBZIP9//ATNRAMP4//ATCHX18//ATSNX1//CBB3//AT3G61010//ATGLR3.2//CAT2//APRL4//CYP71B7//ATMTP11 GO:0044723 single-organism carbohydrate metabolic p... BP 0.0684547086910903 ARA1//ATLDA//AT5G66250//BST1//AT5G51830//ATSUS2//HMA7//14-3-3lambda//CBB3//AtMTM2//AtSAC9//AT3G54130//AtCAL2//AT3G47800//AT4G04340//AT4G00560//AT4G10300//ATF2KP//AtENGase85B//PKP-ALPHA//UKL2//RCI2A//ATFT4//ATSPP1//CP12//AT1G06020//AT1G27520//AT-E1//PP2A-1//ATGSL06//AT1G61690//ATGUT1//AT1G05170//GAUT2//AT2G45620 GO:0016310 phosphorylation BP 0.0707433868309187 NDHF//ARA1//AT1G57700//ATSTP13//BST1//AT5G61350//AT5G60080//AT5G60090//AT5G59680//AT5G55830//AT5G55560//FLS2//AT5G10530//14-3-3lambda//SRF2//AT5G01850//AT3G46930//AT4G05150//AT4G03260//AT1G51805//UKL2//ATPK7//DSPTP1//AT1G71410//AT1G74360//AT2G43850//AT1G08050//ATLFNR2//AT1G63640//BSK4//AtPERK11//AT1G64210//AT2G17530//AT2G17170//AT2G36350//AGL22//AT1G23700//AT2G24370//AT2G24130//SNRK2-9//ER GO:0080129 proteasome core complex assembly BP 0.072552383260807 ATECI2//ATSNX1//AtCAL2//ATUBC2-1 GO:0090558 plant epidermis development BP 0.0756393276142432 ATECI2//BST1//HCF106//ABIL4//CBB3//AtTIR1//AT3G57370//RIC7//AT4G05150//ATN1//SCN1//ATLFNR2//ATHPP2C5//MEE65//ATMLO15//AIR9//COI1//ER GO:0048437 floral organ development BP 0.0787961651410762 HEN4//CBB3//AtTIR1//SPL15//AGL18//RIC7//AT3G52270//BT3//REM22//COBL1//SEU//AT1G63640//ATHPP2C5//AGL22//GLY1//COI1//SPL3 GO:0051603 proteolysis involved in cellular protein... BP 0.0798005400834827 ATECI2//AT5G53360//ATUBC4//UCH1//ATSNX1//AtTIR1//ASK5//AtCAL2//UBP18//AT4G04690//UKL2//AT1G65170//ATUBC2-1//ATSKP2;2//COI1 GO:0009718 anthocyanin-containing compound biosynth... BP 0.0804741191339564 AtRbcX1//AT2G03310//ER GO:0009911 positive regulation of flower developmen... BP 0.0804741191339564 CBB3//YUC//SPL3 GO:0006796 phosphate-containing compound metabolic ... BP 0.0819904555463075 NDHF//AT2G40935//ARA1//ATLDA//AT1G57700//ATSTP13//BST1//AT5G61350//AT5G60080//AT5G60090//AT5G59680//ATTMPK.1//AT5G55830//AT5G55560//AT5G48790//FLS2//HMA7//UDG4//AT5G10530//14-3-3lambda//AT5G07960//SRF2//AtMTM2//AT5G01850//AT5G01300//AtSAC9//AT3G46930//AT4G33770//AT4G05150//AT4G03260//AT4G00560//AT4G10300//ATF2KP//AT1G51805//UKL2//ATPK7//DSPTP1//AT1G71410//AT1G71950//AT1G74360//AT2G43850//AT1G08050//AT1G48040//ATLFNR2//AT1G63640//BSK4//PAB8//AtPERK11//AT1G64210//AT2G17530//ATHPP2C5//AT2G17170//AT2G36350//AGL22//AT1G23700//AT2G24370//AT2G24130//GLY1//PP1-AT//ATMTP11//SNRK2-9//ER GO:0007015 actin filament organization BP 0.0867017097935937 ABIL4//WLIM2b//ARAC3//SCN1//AtCPB//AIR9 GO:0033037 polysaccharide localization BP 0.0872005817874198 FLS2//AT1G74360//ATGSL06//AGL22 GO:0048582 positive regulation of post-embryonic de... BP 0.0872005817874198 AT5G06550//CBB3//YUC//SPL3 GO:0052545 callose localization BP 0.0872005817874198 FLS2//AT1G74360//ATGSL06//AGL22 GO:0006109 regulation of carbohydrate metabolic pro... BP 0.0903627928670197 UKL2//CP12 GO:0006595 polyamine metabolic process BP 0.0903627928670197 APAO//ATVAMP711 GO:0006904 vesicle docking involved in exocytosis BP 0.0903627928670197 ATEXO70A2//ATEXO70H1 GO:0016050 vesicle organization BP 0.0903627928670197 PTAC4//AT1G05020 GO:0042732 D-xylose metabolic process BP 0.0903627928670197 AT3G54130//ATF2KP GO:0048278 vesicle docking BP 0.0903627928670197 ATEXO70A2//ATEXO70H1 GO:0046351 disaccharide biosynthetic process BP 0.0904568532955222 ATSUS2//ATSPP1//AT1G06020 GO:0006793 phosphorus metabolic process BP 0.0921061441837056 NDHF//AT2G40935//ARA1//ATLDA//AT1G57700//ATSTP13//BST1//AT5G61350//AT5G60080//AT5G60090//AT5G59680//ATTMPK.1//AT5G55830//AT5G55560//AT5G48790//FLS2//HMA7//UDG4//AT5G10530//14-3-3lambda//AT5G07960//SRF2//AtMTM2//AT5G01850//AT5G01300//AtSAC9//AT3G46930//AT4G33770//AT4G05150//AT4G03260//AT4G00560//AT4G10300//ATF2KP//AT1G51805//UKL2//ATPK7//DSPTP1//AT1G71410//AT1G71950//AT1G74360//AT2G43850//AT1G08050//AT1G48040//ATLFNR2//AT1G63640//BSK4//PAB8//AtPERK11//AT1G64210//AT2G17530//ATHPP2C5//AT2G17170//AT2G36350//AGL22//AT1G23700//AT2G24370//AT2G24130//GLY1//PP1-AT//ATMTP11//SNRK2-9//ER GO:0010038 response to metal ion BP 0.101904376884098 ATNRAMP4//AT5G51830//AT5G38820//14-3-3lambda//ATVAMP711//PKP-ALPHA//RCI2A//STOP1//PAB8//AT-E1//AtPP5//ATMTP11//AT2G39920 GO:0051094 positive regulation of developmental pro... BP 0.103158091326293 AT5G06550//CBB3//YUC//SPL3 GO:0051240 positive regulation of multicellular org... BP 0.103158091326293 AT5G06550//CBB3//YUC//SPL3 GO:0010016 shoot system morphogenesis BP 0.104456108358621 AT5G25475//HCF106//AtELP3//UCH1//AtTIR1//AT4G32340//RIC7//BT3//ATUBC2-1//ATLFNR2//AGL22//AT1G78995//COI1//ER GO:0019725 cellular homeostasis BP 0.105125763444202 AT4G15680//AT4G15700//ATBZIP9//ATNRAMP4//AT3G61010//ATGLR3.2//CAT2//APRL4//CYP71B7//ATMTP11 GO:0006887 exocytosis BP 0.106806596582519 ATEXO70A2//ATEXO70H1 GO:0022406 membrane docking BP 0.106806596582519 ATEXO70A2//ATEXO70H1 GO:0048235 pollen sperm cell differentiation BP 0.106806596582519 COPT1//IMPA-8 GO:0055072 iron ion homeostasis BP 0.106806596582519 ATNRAMP4//AT3G61010 GO:0009438 methylglyoxal metabolic process BP 0.11160319821045 ABCF4//GLX2-4//AT1G55805//AT2G16710 GO:0019243 methylglyoxal catabolic process to D-lac... BP 0.11160319821045 ABCF4//GLX2-4//AT1G55805//AT2G16710 GO:0042182 ketone catabolic process BP 0.11160319821045 ABCF4//GLX2-4//AT1G55805//AT2G16710 GO:0051596 methylglyoxal catabolic process BP 0.11160319821045 ABCF4//GLX2-4//AT1G55805//AT2G16710 GO:0043094 cellular metabolic compound salvage BP 0.11268639864598 ATSNX1//AtCAL2//AT3G15290//UKL2//ATLFNR2 GO:0009056 catabolic process BP 0.115042072598362 ATECI2//ATLDA//BST1//AT5G53220//AT5G53360//ATUBC4//AT5G38895//TGH//UCH1//APAO//14-3-3lambda//ATSNX1//AtMTM2//AtATG18a//AtTIR1//ASK5//ABCF4//AT3G51730//AtCAL2//CAT2//ATVAMP711//UBP18//AT4G29420//AT4G04690//AT1G13750//EMB1303//PKP-ALPHA//UKL2//AT1G65170//AT3G22440//RCI2A//CP12//SEU//GLX2-4//ATUBC2-1//At-SR34//AT1G72890//CYP71B7//AT-E1//PP2A-1//AT2G13440//AT1G04350//AT1G55805//ATSKP2;2//AT2G16710//ATG8D//GLY1//COI1//AT2G45620 GO:0050801 ion homeostasis BP 0.116446137260821 C2H2//ATNRAMP4//ATCHX18//AT3G61010//ATGLR3.2//CYP71B7//ATMTP11 GO:0009909 regulation of flower development BP 0.117386063635538 AT5G06550//CBB3//AGL18//YUC//COBL1//HTA9//SEU//ATUBC2-1//AT1G63640//AGL22//COI1//SPL3 GO:0006914 autophagy BP 0.119983214611103 AT5G38895//AtATG18a//AT4G29420//AT1G72890//ATG8D GO:0009310 amine catabolic process BP 0.120344505775683 APAO//ATVAMP711//AT1G13750//CYP71B7 GO:0042402 cellular biogenic amine catabolic proces... BP 0.120344505775683 APAO//ATVAMP711//AT1G13750//CYP71B7 GO:0046434 organophosphate catabolic process BP 0.12320419484512 BST1//AtMTM2//GLY1 GO:0052386 cell wall thickening BP 0.12320419484512 FLS2//ATGSL06//AGL22 GO:0052543 callose deposition in cell wall BP 0.12320419484512 FLS2//ATGSL06//AGL22 GO:2000243 positive regulation of reproductive proc... BP 0.12320419484512 CBB3//YUC//SPL3 GO:0044257 cellular protein catabolic process BP 0.123297680362194 ATECI2//AT5G53360//ATUBC4//UCH1//ATSNX1//AtTIR1//ASK5//AtCAL2//UBP18//AT4G04690//UKL2//AT1G65170//ATUBC2-1//ATSKP2;2//COI1 GO:0016575 histone deacetylation BP 0.123967453540752 HDA7//ATHDA8 GO:0048232 male gamete generation BP 0.123967453540752 COPT1//IMPA-8 GO:0006066 alcohol metabolic process BP 0.125423157288303 BST1//AACT1//AT5G10820//CBB3//AtMTM2//NDP1//AT5G01300//AT4G33770//PKP-ALPHA//ATBPC7//AT1G73050//ATMTP11 GO:1901575 organic substance catabolic process BP 0.126215234222473 ATECI2//ATLDA//BST1//AT5G53220//AT5G53360//ATUBC4//TGH//UCH1//APAO//14-3-3lambda//ATSNX1//AtMTM2//AtATG18a//AtTIR1//ASK5//ABCF4//AT3G51730//AtCAL2//ATVAMP711//UBP18//AT4G04690//AT1G13750//EMB1303//PKP-ALPHA//UKL2//AT1G65170//AT3G22440//RCI2A//CP12//GLX2-4//ATUBC2-1//At-SR34//CYP71B7//AT-E1//PP2A-1//AT1G04350//AT1G55805//ATSKP2;2//AT2G16710//GLY1//COI1//AT2G45620 GO:0046185 aldehyde catabolic process BP 0.129370169347886 ABCF4//GLX2-4//AT1G55805//AT2G16710 GO:0048827 phyllome development BP 0.129533960276285 AtELP3//UCH1//CBB3//AtATG18a//AtTIR1//SPL15//AGL18//AT4G32340//YUC//RIC7//AT3G52270//REM22//SEU//ATUBC2-1//ATHPP2C5//AtGRF3//AGL22//AT1G78995//GLY1//COI1//ER//SPL3 GO:0009312 oligosaccharide biosynthetic process BP 0.13495504465479 ATSUS2//ATSPP1//AT1G06020 GO:0055076 transition metal ion homeostasis BP 0.13495504465479 ATNRAMP4//AT3G61010//ATMTP11 GO:0055082 cellular chemical homeostasis BP 0.135934667857999 ATBZIP9//ATNRAMP4//AT3G61010//ATGLR3.2//CYP71B7//ATMTP11 GO:0022622 root system development BP 0.137858935800788 ATECI2//C2H2//BST1//COPT1//ATSNX1//CBB3//AtMTM2//AtTIR1//AT4G05150//ATN1//SCN1//AtGRF3//ATSKP2;2//ATMLO15//AIR9 GO:0048364 root development BP 0.137858935800788 ATECI2//C2H2//BST1//COPT1//ATSNX1//CBB3//AtMTM2//AtTIR1//AT4G05150//ATN1//SCN1//AtGRF3//ATSKP2;2//ATMLO15//AIR9 GO:0048513 organ development BP 0.13848180042406 ATECI2//C2H2//AT5G25475//AT5G25770//BST1//HEN4//COPT1//AT5G55560//AtELP3//ATSNX1//CBB3//AtMTM2//AtATG18a//AtTIR1//SPL15//AGL18//AT4G32340//RIC7//AT4G05150//AT3G52270//BT3//REM22//ATN1//SCN1//COBL1//SEU//ATUBC2-1//AT1G63640//AT1G15400//ATHPP2C5//AtGRF3//AT2G36350//AGL22//AT1G78995//ATSKP2;2//GLY1//AT2G38370//ATMLO15//AIR9//COI1//ER//SPL3 GO:0005975 carbohydrate metabolic process BP 0.138540955465189 ARA1//ATLDA//AT5G66250//BST1//AT5G57655//AT5G51830//ATSUS2//HMA7//14-3-3lambda//CBB3//AtMTM2//AT3G61810//AtSAC9//AT3G55780//AT3G54130//AtCAL2//AT3G47800//CAT2//BGLU9//AT4G04340//AT4G00560//AT4G10300//ATF2KP//AtENGase85B//PKP-ALPHA//UKL2//RCI2A//ATFT4//ATSPP1//CP12//AT1G06020//AT1G27520//AT-E1//PP2A-1//ATGSL06//AT1G61690//ATGUT1//AT1G05170//GAUT2//GLY1//AT2G45620 GO:0009292 genetic transfer BP 0.14172850942559 AtELP3//HON5 GO:0009294 DNA mediated transformation BP 0.14172850942559 AtELP3//HON5 GO:0009165 nucleotide biosynthetic process BP 0.142862259441726 ATTMPK.1//HMA7//UDG4//AT4G00560//UKL2//PAB8 GO:1901293 nucleoside phosphate biosynthetic proces... BP 0.142862259441726 ATTMPK.1//HMA7//UDG4//AT4G00560//UKL2//PAB8 GO:0030163 protein catabolic process BP 0.145487029645247 ATECI2//AT5G53360//ATUBC4//UCH1//ATSNX1//AtTIR1//ASK5//AtCAL2//UBP18//AT4G04690//UKL2//AT1G65170//ATUBC2-1//ATSKP2;2//COI1 GO:0009648 photoperiodism BP 0.146491677875604 AT5G14530//AGL18//WLIM2b//CAT2//EMB1303//BT3//AT1G80780//At-RSZ21//AT2G32000//AT2G45620 GO:0019318 hexose metabolic process BP 0.146538142223645 ARA1//14-3-3lambda//AT3G47800//ATF2KP//UKL2//CP12//PP2A-1 GO:0044265 cellular macromolecule catabolic process BP 0.146718037249441 ATECI2//AT5G53360//ATUBC4//TGH//UCH1//ATSNX1//AtATG18a//AtTIR1//ASK5//AtCAL2//UBP18//AT4G04690//UKL2//AT1G65170//AT3G22440//ATUBC2-1//At-SR34//ATSKP2;2//COI1//AT2G45620 GO:0055065 metal ion homeostasis BP 0.148224500671863 ATNRAMP4//AT3G61010//ATGLR3.2//ATMTP11 GO:0048438 floral whorl development BP 0.148229177464018 CBB3//AtTIR1//SPL15//AGL18//RIC7//AT3G52270//REM22//SEU//ATHPP2C5//AGL22//GLY1//COI1//SPL3 GO:0030036 actin cytoskeleton organization BP 0.149949071174417 ABIL4//WLIM2b//ARAC3//SCN1//AtCPB//AIR9 GO:0000398 mRNA splicing, via spliceosome BP 0.15126541477879 AT5G53680//ATBPC7//At-SR34//At-RSZ21//At-RS31a GO:0010243 response to organonitrogen compound BP 0.154186626545939 ATECI2//C2H2//AT5G66070//AT5G38895//AT3G54130//AT3G46930//AT1G74410//AT1G74360//ATLFNR2//ATERF15//PP2CG1 GO:0006089 lactate metabolic process BP 0.158027033800328 ABCF4//GLX2-4//AT1G55805//AT2G16710 GO:0065001 specification of axis polarity BP 0.158027033800328 AtELP3//COBL1//AT2G38370//ER