GOID	TERM	ONTOLOGY	pValue	Genes
GO:0019243	methylglyoxal catabolic process to D-lac...	BP	0.00651698924629156	AT5G17560//AT4G12130//AT1G33780//AT1G09800
GO:0009438	methylglyoxal metabolic process	BP	0.0069907535964685	AT5G17560//AT4G12130//AT1G33780//AT1G09800
GO:0042182	ketone catabolic process	BP	0.0069907535964685	AT5G17560//AT4G12130//AT1G33780//AT1G09800
GO:0051596	methylglyoxal catabolic process	BP	0.0069907535964685	AT5G17560//AT4G12130//AT1G33780//AT1G09800
GO:0046185	aldehyde catabolic process	BP	0.00854709552023679	AT5G17560//AT4G12130//AT1G33780//AT1G09800
GO:0006089	lactate metabolic process	BP	0.00911225153154396	AT5G17560//AT4G12130//AT1G33780//AT1G09800
GO:0098655	cation transmembrane transport	BP	0.0101948830924023	ATCHX12//ATIREG2//AVMA10//ATVHA-C//CPK24
GO:0098662	inorganic cation transmembrane transport	BP	0.0101948830924023	ATCHX12//ATIREG2//AVMA10//ATVHA-C//CPK24
GO:0098660	inorganic ion transmembrane transport	BP	0.0106745564327282	ATCHX12//ATIREG2//AVMA10//ATVHA-C//CPK24
GO:0006081	cellular aldehyde metabolic process	BP	0.0222371878882137	AT5G17560//PTAC16//SEP1//AT4G12130//ESM1//AT1G74070//AT1G33780//AT1G09800
GO:0015988	energy coupled proton transmembrane tran...	BP	0.0232744807900218	AVMA10//ATVHA-C
GO:0015991	ATP hydrolysis coupled proton transport	BP	0.0232744807900218	AVMA10//ATVHA-C
GO:0034220	ion transmembrane transport	BP	0.0245707446275105	ATCHX12//ATIREG2//AVMA10//ATVHA-C//CPK24
GO:0010048	vernalization response	BP	0.0330031528059378	AT3G46680//AT4G26620//FLA
GO:0048445	carpel morphogenesis	BP	0.0422687458609474	AT5G51800//AT3G29140
GO:0009910	negative regulation of flower developmen...	BP	0.0458491364254776	anac089//FLA
GO:0046365	monosaccharide catabolic process	BP	0.0535168301902948	AVMA10//ATVHA-C//XK-1
GO:2000242	negative regulation of reproductive proc...	BP	0.0572183973194592	anac089//FLA
GO:0006399	tRNA metabolic process	BP	0.0582076573484118	ATSEN2//AT5G10880//NUZ
GO:0042180	cellular ketone metabolic process	BP	0.059250441066935	AT5G17560//AT4G12130//AT1G33780//AT1G09800
GO:0015672	monovalent inorganic cation transport	BP	0.0680683608153229	ATCHX12//SEP1//AVMA10//ATVHA-C//CPK24
GO:0022900	electron transport chain	BP	0.0681481102110506	SEP1//PnsL3//AT2G01090
GO:0009809	lignin biosynthetic process	BP	0.0780336355882912	ATVHA-C//ANAC012
GO:1902600	hydrogen ion transmembrane transport	BP	0.0780336355882912	AVMA10//ATVHA-C
GO:0008033	tRNA processing	BP	0.0824445666041491	ATSEN2//NUZ
GO:0006818	hydrogen transport	BP	0.0843897006624221	SEP1//AVMA10//ATVHA-C
GO:0015992	proton transport	BP	0.0843897006624221	SEP1//AVMA10//ATVHA-C
GO:0015979	photosynthesis	BP	0.0937454361676066	YCF9//RBCL//PTAC16//SEP1//ESM1//PnsL3
GO:0009767	photosynthetic electron transport chain	BP	0.105558542114308	SEP1//PnsL3
GO:0010043	response to zinc ion	BP	0.110371919956064	AT3G45410//PAB1
GO:0010218	response to far red light	BP	0.115242076896051	PTAC16//SEP1
GO:0034660	ncRNA metabolic process	BP	0.133002316924088	ATSEN2//AT5G10880//PTAC16//SEP1//NUZ
GO:0009902	chloroplast relocation	BP	0.135236523687714	PTAC16//AT1G64500
GO:0048581	negative regulation of post-embryonic de...	BP	0.135236523687714	anac089//FLA
GO:0051667	establishment of plastid localization	BP	0.135236523687714	PTAC16//AT1G64500
GO:0006812	cation transport	BP	0.137379079679764	AT5G20700//ATCHX12//AT5G15240//ATIREG2//AT3G45410//CYP81F4//SEP1//AVMA10//ATVHA-C//CPK24
GO:0009932	cell tip growth	BP	0.139746914278041	PIP5K3//AT4G33390//ANN5//ATVHA-C//CPK24
GO:0010109	regulation of photosynthesis	BP	0.140014321818065	004_
GO:0010769	regulation of cell morphogenesis involve...	BP	0.140014321818065	450_
GO:0015977	carbon fixation	BP	0.140014321818065	015_
GO:0060284	regulation of cell development	BP	0.140014321818065	450_
GO:0010114	response to red light	BP	0.140350683036196	PTAC16//SEP1
GO:0019750	chloroplast localization	BP	0.140350683036196	PTAC16//AT1G64500
GO:0051644	plastid localization	BP	0.140350683036196	PTAC16//AT1G64500
GO:0051656	establishment of organelle localization	BP	0.140350683036196	PTAC16//AT1G64500
GO:0009808	lignin metabolic process	BP	0.145506125239307	ATVHA-C//ANAC012
GO:0006354	DNA-templated transcription, elongation	BP	0.148418881175899	YCF9//RBCL//AT3G25940
GO:0001522	pseudouridine synthesis	BP	0.152895590167541	711_
GO:0016093	polyprenol metabolic process	BP	0.152895590167541	797_
GO:0016094	polyprenol biosynthetic process	BP	0.152895590167541	797_
GO:0019348	dolichol metabolic process	BP	0.152895590167541	797_
GO:0019408	dolichol biosynthetic process	BP	0.152895590167541	797_
GO:0031123	RNA 3'-end processing	BP	0.152895590167541	222_
GO:0071472	cellular response to salt stress	BP	0.152895590167541	568_
GO:0009637	response to blue light	BP	0.161196865028447	PTAC16//SEP1
GO:0051241	negative regulation of multicellular org...	BP	0.161196865028447	anac089//FLA
GO:0022898	regulation of transmembrane transporter ...	BP	0.165585104779768	450_
GO:0032409	regulation of transporter activity	BP	0.165585104779768	450_
GO:0032412	regulation of ion transmembrane transpor...	BP	0.165585104779768	450_
GO:0034762	regulation of transmembrane transport	BP	0.165585104779768	450_
GO:0034765	regulation of ion transmembrane transpor...	BP	0.165585104779768	450_
GO:0048506	regulation of timing of meristematic pha...	BP	0.165585104779768	634_
GO:0048510	regulation of timing of transition from ...	BP	0.165585104779768	634_
GO:0009409	response to cold	BP	0.16719007228648	AtcPT5//AT3G46680//AT4G26620//AT4G03290//FLA//ESM1//ANN5
GO:0006816	calcium ion transport	BP	0.177177807474052	AT5G20700//ATVHA-C
GO:0006098	pentose-phosphate shunt	BP	0.17742459961064	PTAC16//SEP1//ESM1
GO:0051156	glucose 6-phosphate metabolic process	BP	0.17742459961064	PTAC16//SEP1//ESM1
GO:0009900	dehiscence	BP	0.17808570246097	703_
GO:0044273	sulfur compound catabolic process	BP	0.17808570246097	008_
GO:0046834	lipid phosphorylation	BP	0.17808570246097	249_
GO:0046854	phosphatidylinositol phosphorylation	BP	0.17808570246097	249_
GO:0006739	NADP metabolic process	BP	0.184909520236807	PTAC16//SEP1//ESM1
GO:0072511	divalent inorganic cation transport	BP	0.184909520236807	AT5G20700//ATIREG2//ATVHA-C
GO:0030001	metal ion transport	BP	0.187095256252188	AT5G20700//ATCHX12//ATIREG2//AT3G45410//CYP81F4//ATVHA-C//CPK24
GO:0006007	glucose catabolic process	BP	0.187965219189703	AVMA10//ATVHA-C
GO:0019320	hexose catabolic process	BP	0.187965219189703	AVMA10//ATVHA-C
GO:0034470	ncRNA processing	BP	0.190279124897792	ATSEN2//PTAC16//SEP1//NUZ
GO:0042775	mitochondrial ATP synthesis coupled elec...	BP	0.190400178311353	206_
GO:0071804	cellular potassium ion transport	BP	0.190400178311353	450_
GO:0071805	potassium ion transmembrane transport	BP	0.190400178311353	450_
GO:0015995	chlorophyll biosynthetic process	BP	0.193393077045612	PTAC16//SEP1
GO:0007167	enzyme linked receptor protein signaling...	BP	0.198841209440011	AT5G49780//AT3G46370
GO:0007169	transmembrane receptor protein tyrosine ...	BP	0.198841209440011	AT5G49780//AT3G46370
GO:0010054	trichoblast differentiation	BP	0.199437016311843	PIP5K3//AT4G27290//AtGH9C1//ATVHA-C
GO:0006109	regulation of carbohydrate metabolic pro...	BP	0.202531286334409	210_
GO:0009853	photorespiration	BP	0.203970789860632	AT4G00585//DPMS3//ATVHA-C
GO:0019362	pyridine nucleotide metabolic process	BP	0.203970789860632	PTAC16//SEP1//ESM1
GO:0046496	nicotinamide nucleotide metabolic proces...	BP	0.203970789860632	PTAC16//SEP1//ESM1
GO:0019684	photosynthesis, light reaction	BP	0.205615991893325	YCF9//PTAC16//SEP1//PnsL3
GO:0006418	tRNA aminoacylation for protein translat...	BP	0.214481740037368	392_
GO:0040034	regulation of development, heterochronic	BP	0.214481740037368	634_
GO:0043038	amino acid activation	BP	0.214481740037368	392_
GO:0043039	tRNA aminoacylation	BP	0.214481740037368	392_
GO:0071470	cellular response to osmotic stress	BP	0.214481740037368	568_
GO:0010053	root epidermal cell differentiation	BP	0.221302093586251	PIP5K3//AT4G27290//AtGH9C1//ATVHA-C
GO:0072524	pyridine-containing compound metabolic p...	BP	0.223464294686199	PTAC16//SEP1//ESM1
GO:0019288	isopentenyl diphosphate biosynthetic pro...	BP	0.235334303232806	SEP1//ESM1//AT1G74070
GO:0090627	plant epidermal cell differentiation	BP	0.237296047534268	PIP5K3//AT4G27290//AtGH9C1//ATVHA-C
GO:0006119	oxidative phosphorylation	BP	0.237851339572484	206_
GO:0009817	defense response to fungus, incompatible...	BP	0.237851339572484	629_