GOID TERM ONTOLOGY pValue Genes GO:0009853 photorespiration BP 1.34820408550704e-05 CI51//AT3G52730//AtFBA8//AT3G46430//AT4G30010//ASAR1//AT3G27240//AT3G07480//APFI//AT2G27730 GO:0043094 cellular metabolic compound salvage BP 3.51269871888704e-05 CI51//AT3G52730//AtFBA8//AT3G46430//AT4G30010//ASAR1//AT3G27240//AT3G07480//APFI//AT2G27730 GO:0080129 proteasome core complex assembly BP 0.000157134788042589 ARS5//CI51//AtFBA8//AT4G30010//ASAR1//AT3G27240//AT3G07480//AT2G27730 GO:0045333 cellular respiration BP 0.00109342191776667 CI51//AT3G52730//AT4G30010//AT3G27240//mtLPD2//IDI2 GO:0043248 proteasome assembly BP 0.00131071763010176 ARS5//CI51//AtFBA8//AT4G30010//ASAR1//AT3G27240//AT3G07480//AT2G27730 GO:0051788 response to misfolded protein BP 0.00131071763010176 ARS5//CI51//AtFBA8//AT4G30010//ASAR1//AT3G27240//AT3G07480//AT2G27730 GO:0015980 energy derivation by oxidation of organi... BP 0.00176115886380671 CI51//AT3G52730//AT4G30010//AT3G27240//mtLPD2//IDI2 GO:0009060 aerobic respiration BP 0.00489345987382141 AT4G30010//AT3G27240//mtLPD2//IDI2 GO:0006090 pyruvate metabolic process BP 0.00541272570913678 PFK7//AtFBA8//AT4G30010//ASAR1//AT3G27240//mtLPD2//IDI2//AT1G03040 GO:0006511 ubiquitin-dependent protein catabolic pr... BP 0.00808704818423852 ARS5//UBQ9//CI51//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//AT3G07480//AT2G27730 GO:0035384 thioester biosynthetic process BP 0.00822268970822124 AtFBA8//AT1G03040 GO:0071616 acyl-CoA biosynthetic process BP 0.00822268970822124 AtFBA8//AT1G03040 GO:0006096 glycolytic process BP 0.00846405155585973 PFK7//AtFBA8//AT4G30010//ASAR1//AT3G27240//mtLPD2//IDI2 GO:0019941 modification-dependent protein catabolic... BP 0.00866049857751696 ARS5//UBQ9//CI51//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//AT3G07480//AT2G27730 GO:0043632 modification-dependent macromolecule cat... BP 0.00866049857751696 ARS5//UBQ9//CI51//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//AT3G07480//AT2G27730 GO:0048868 pollen tube development BP 0.00866921789922495 cdc2cAt//DAF1//SDP1-LIKE//AT4G20160//AT1G51410//CPK24//ATCHX15//AT2G10970 GO:0003006 developmental process involved in reprod... BP 0.00959679999442636 FWA//ELF9//ATHDA6//ATHVA22B//CRF3//cdc2cAt//ATGSL09//COP13//DAF1//AtMYB17//SDP1-LIKE//AT4G20160//AT4G01730//ABCB17//IDI2//APFI//AT1G51410//DRP5A//PCR11//INO//CPK24//ATCHX15//AGC2-3//AT2G10970//ATC//EMB2795 GO:0010315 auxin efflux BP 0.00995764829780255 ATPIN8//ABCB17 GO:0006346 methylation-dependent chromatin silencin... BP 0.00999965568626573 ELF9//AT4G01730//DRP5A//EMB2795 GO:0048235 pollen sperm cell differentiation BP 0.0118395529177569 DAF1//PCR11 GO:0043933 macromolecular complex subunit organizat... BP 0.0125300848165074 FWA//ELF9//ATHDA6//ARS5//COP13//CI51//AtFBA8//AT4G30010//ASAR1//AT4G01730//ATUBP6//AT3G27240//AT3G07480//APFI//DRP5A//INO//AT2G27730//EMB2795 GO:0019722 calcium-mediated signaling BP 0.0128730713484704 CLS//CBL5//EMB2795 GO:0042775 mitochondrial ATP synthesis coupled elec... BP 0.0138639767890104 CI51//AT3G52730 GO:2000241 regulation of reproductive process BP 0.014579807851957 FWA//ELF9//COP13//AtMYB17//DRP5A//CPK24//ATC//EMB2795 GO:0010928 regulation of auxin mediated signaling p... BP 0.0160265872866843 ATPIN8//ABCB17 GO:0044265 cellular macromolecule catabolic process BP 0.0160703983402219 AAC2//ELF9//ARS5//UBQ9//CI51//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//AT3G07480//AT2G27730 GO:0006091 generation of precursor metabolites and ... BP 0.0160814931307973 PFK7//CI51//AT3G52730//AtFBA8//AT4G30010//ASAR1//AT3G27240//mtLPD2//IDI2 GO:0051603 proteolysis involved in cellular protein... BP 0.0166217271423853 AAC2//ARS5//UBQ9//CI51//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//AT3G07480//AT2G27730 GO:0044257 cellular protein catabolic process BP 0.0172247761435196 AAC2//ARS5//UBQ9//CI51//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//AT3G07480//AT2G27730 GO:0006119 oxidative phosphorylation BP 0.0183231441934822 CI51//AT3G52730 GO:0042773 ATP synthesis coupled electron transport BP 0.0183231441934822 CI51//AT3G52730 GO:0044702 single organism reproductive process BP 0.0191908514299952 FWA//ELF9//ATHDA6//ATHVA22B//CRF3//cdc2cAt//ATGSL09//COP13//DAF1//AtMYB17//AT4G01730//ABCB17//IDI2//APFI//DRP5A//PCR11//INO//CPK24//ATCHX15//AGC2-3//AT2G10970//ATC//EMB2795 GO:0022414 reproductive process BP 0.0201816813633286 FWA//ELF9//ATHDA6//ATHVA22B//CRF3//cdc2cAt//ATGSL09//COP13//DAF1//AtMYB17//SDP1-LIKE//AT4G20160//AT4G01730//ABCB17//IDI2//APFI//AT1G51410//DRP5A//PCR11//INO//CPK24//ATCHX15//AGC2-3//AT2G10970//ATC//EMB2795 GO:0030163 protein catabolic process BP 0.0208388638529145 AAC2//ARS5//UBQ9//CI51//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//AT3G07480//AT2G27730 GO:0009909 regulation of flower development BP 0.0218681827591397 FWA//ELF9//COP13//AtMYB17//DRP5A//ATC//EMB2795 GO:0009664 plant-type cell wall organization BP 0.0220296045660571 TCH4//DAF1//AT4G08410//AT59//ATCHX15//AT1G23720//AT2G10970//LCR72 GO:0022904 respiratory electron transport chain BP 0.0233015881332565 CI51//AT3G52730 GO:0009908 flower development BP 0.0234888412708002 FWA//ELF9//COP13//AtMYB17//AT4G01730//ABCB17//IDI2//APFI//DRP5A//INO//AGC2-3//ATC//EMB2795 GO:0009856 pollination BP 0.0250233439254079 cdc2cAt//DAF1//SDP1-LIKE//AT4G20160//AT1G51410//CPK24//ATCHX15//AT2G10970 GO:0044706 multi-multicellular organism process BP 0.0250233439254079 cdc2cAt//DAF1//SDP1-LIKE//AT4G20160//AT1G51410//CPK24//ATCHX15//AT2G10970 GO:0009057 macromolecule catabolic process BP 0.0254830546987223 AAC2//ELF9//ARS5//UBQ9//CI51//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//AT3G07480//AT2G27730 GO:0090567 reproductive shoot system development BP 0.0255888433032604 FWA//ELF9//COP13//AtMYB17//AT4G01730//ABCB17//IDI2//APFI//DRP5A//INO//AGC2-3//ATC//EMB2795 GO:0019932 second-messenger-mediated signaling BP 0.0267000381269461 CLS//CBL5//EMB2795 GO:0009910 negative regulation of flower developmen... BP 0.0287671705264365 ELF9//ATC GO:0044724 single-organism carbohydrate catabolic p... BP 0.0294440313604023 PFK7//AT5G17190//AtFBA8//AT4G30010//ASAR1//AT3G27240//mtLPD2//IDI2 GO:0048232 male gamete generation BP 0.0316729719654185 DAF1//PCR11 GO:2000242 negative regulation of reproductive proc... BP 0.0316729719654185 ELF9//ATC GO:0006508 proteolysis BP 0.0316928641315891 AAC2//DEG14//ARS5//UBQ9//CI51//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//AT3G07480//scpl5//scpl44//AT2G27730 GO:0000086 G2/M transition of mitotic cell cycle BP 0.0331088359045767 COP13//DRP5A//EMB2795 GO:0010389 regulation of G2/M transition of mitotic... BP 0.0331088359045767 COP13//DRP5A//EMB2795 GO:0044839 cell cycle G2/M phase transition BP 0.0331088359045767 COP13//DRP5A//EMB2795 GO:1902749 regulation of cell cycle G2/M phase tran... BP 0.0331088359045767 COP13//DRP5A//EMB2795 GO:0048831 regulation of shoot system development BP 0.033720559678305 FWA//ELF9//COP13//AtMYB17//DRP5A//ATC//EMB2795 GO:0006270 DNA replication initiation BP 0.0348251411711485 AT3G03130//DRP5A//EMB2795 GO:0016052 carbohydrate catabolic process BP 0.0398466552764967 PFK7//AT5G17190//AtFBA8//AT4G30010//ASAR1//AT3G27240//mtLPD2//IDI2 GO:1901987 regulation of cell cycle phase transitio... BP 0.0402447549418789 COP13//DRP5A//EMB2795 GO:1901990 regulation of mitotic cell cycle phase t... BP 0.0402447549418789 COP13//DRP5A//EMB2795 GO:0055046 microgametogenesis BP 0.0410380059939486 DAF1//PCR11 GO:0032504 multicellular organism reproduction BP 0.0422396287788437 ATHDA6//ATHVA22B//COP13//DAF1//AT1G72270//APFI//PCR11 GO:0044770 cell cycle phase transition BP 0.0440808864841795 COP13//DRP5A//EMB2795 GO:0044772 mitotic cell cycle phase transition BP 0.0440808864841795 COP13//DRP5A//EMB2795 GO:0043623 cellular protein complex assembly BP 0.0450045221718547 FWA//ARS5//CI51//AtFBA8//AT4G30010//ASAR1//AT3G27240//AT3G07480//AT2G27730 GO:0071555 cell wall organization BP 0.0474497022345488 FWA//TCH4//ATGSL09//DAF1//AT4G08410//AT59//ATCHX15//AT1G23720//AT2G10970//LCR72 GO:0009827 plant-type cell wall modification BP 0.0476545385567006 DAF1//AT59//ATCHX15//AT2G10970//LCR72 GO:0016579 protein deubiquitination BP 0.0477856398778348 COP13//ATUBP6 GO:0016569 covalent chromatin modification BP 0.049243766777705 ELF9//ATHDA6//COP13//AT4G01730//ATUBP6//DRP5A//EMB2795 GO:0044703 multi-organism reproductive process BP 0.0495195411306355 cdc2cAt//COP13//DAF1//SDP1-LIKE//AT4G20160//AT1G51410//PCR11//CPK24//ATCHX15//AT2G10970 GO:0031048 chromatin silencing by small RNA BP 0.050163724256215 AT4G01730//DRP5A//EMB2795 GO:0022900 electron transport chain BP 0.0513005209403236 CI51//AT3G52730 GO:0010038 response to metal ion BP 0.0523727336217484 ABCB27//AtFBA8//ATZIP9//AT4G30010//CLT2//ASAR1//AT3G27240//mtLPD2//IDI2//AT2G30710 GO:0016197 endosomal transport BP 0.0549050773902243 YLS8//VPS26B GO:0016043 cellular component organization BP 0.0558881681969185 FWA//ATHDG11//AAC2//YLS8//ELF9//ATHDA6//APUM18//TCH4//HCT//ARS5//cdc2cAt//ATGSL09//COP13//CI51//DAF1//AtFBA8//AT4G30010//AT4G28770//IM//AT4G08410//ASAR1//AT4G01730//ATUBP6//AT3G27240//AT3G07480//AT1G72270//APFI//DRP5A//AT59//INO//CPK24//ATCHX15//AT1G23720//AT2G10970//LCR72//AT2G27730//EMB2795 GO:0016458 gene silencing BP 0.0562629643819233 FWA//ELF9//ATHDA6//AT4G01730//DRP5A//EMB2795 GO:0048367 shoot system development BP 0.0564402504445377 FWA//YLS8//ELF9//CRF3//COP13//AtMYB17//AT4G01730//ABCB17//IDI2//APFI//DRP5A//INO//AGC2-3//ATC//EMB2795 GO:0031047 gene silencing by RNA BP 0.0578797298595711 FWA//ELF9//AT4G01730//DRP5A//EMB2795 GO:0044712 single-organism catabolic process BP 0.0587858532774086 ATPCME//PFK7//MGE1//ARS5//AT5G17190//SDP1-LIKE//AtFBA8//AT4G30010//ASAR1//AT3G27240//mtLPD2//IDI2//AtBCAT7//ATGSTF5//PYL2 GO:0035966 response to topologically incorrect prot... BP 0.0605837580305327 ARS5//CI51//AtFBA8//AT4G30010//ASAR1//AT3G27240//AT3G07480//AT2G27730 GO:0009056 catabolic process BP 0.0611101862093616 AAC2//ELF9//ATPCME//PFK7//MGE1//ARS5//UBQ9//AT5G17190//CI51//SDP1-LIKE//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//mtLPD2//IDI2//AT3G07480//AtBCAT7//AT2G27730//ATGSTF5//PYL2 GO:0000398 mRNA splicing, via spliceosome BP 0.0611545622256259 RNPS1//smB//At-RS31a GO:0016568 chromatin modification BP 0.0631927129413098 ELF9//ATHDA6//COP13//AT4G01730//ATUBP6//DRP5A//EMB2795 GO:0030001 metal ion transport BP 0.0664138488451902 AT1G57780//UGT72E3//AT3G54040//ATZIP9//AT4G28770//CPK24//ATCHX15//ATC GO:1901575 organic substance catabolic process BP 0.0674809594180032 AAC2//ELF9//ATPCME//PFK7//ARS5//UBQ9//AT5G17190//CI51//SDP1-LIKE//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//mtLPD2//IDI2//AT3G07480//AT2G27730//PYL2 GO:0044248 cellular catabolic process BP 0.068168298401611 AAC2//ELF9//ATPCME//MGE1//ARS5//UBQ9//CI51//SDP1-LIKE//AtFBA8//AT4G30010//ASAR1//ATUBP6//AT3G27240//AT3G07480//AtBCAT7//AT2G27730//ATGSTF5//PYL2 GO:0000375 RNA splicing, via transesterification re... BP 0.0682430032703448 RNPS1//smB//At-RS31a GO:0000377 RNA splicing, via transesterification re... BP 0.0682430032703448 RNPS1//smB//At-RS31a GO:0006461 protein complex assembly BP 0.0691467410467061 FWA//ARS5//CI51//AtFBA8//AT4G30010//ASAR1//AT3G27240//AT3G07480//APFI//AT2G27730 GO:0009062 fatty acid catabolic process BP 0.0695184984223246 ATPCME//ARS5//SDP1-LIKE//PYL2 GO:0070271 protein complex biogenesis BP 0.0700220982013291 FWA//ARS5//CI51//AtFBA8//AT4G30010//ASAR1//AT3G27240//AT3G07480//APFI//AT2G27730 GO:0007346 regulation of mitotic cell cycle BP 0.0706854875213575 COP13//DRP5A//EMB2795 GO:0051276 chromosome organization BP 0.0726905129167863 ELF9//ATHDA6//APUM18//COP13//AT4G01730//ATUBP6//AT1G72270//DRP5A//INO//EMB2795 GO:0043269 regulation of ion transport BP 0.0731670229325719 AAC2//ATVDAC4//CPK24 GO:0072329 monocarboxylic acid catabolic process BP 0.0751293280123966 ATPCME//ARS5//SDP1-LIKE//PYL2 GO:0048580 regulation of post-embryonic development BP 0.0756900762907616 FWA//ELF9//COP13//AtMYB17//DRP5A//ATC//EMB2795 GO:0071669 plant-type cell wall organization or bio... BP 0.0757923718361312 TCH4//DAF1//AT4G08410//AT59//ATCHX15//AT1G23720//AT2G10970//LCR72 GO:0048609 multicellular organismal reproductive pr... BP 0.0761951621893096 ATHDA6//ATHVA22B//COP13//DAF1//APFI//PCR11 GO:0045229 external encapsulating structure organiz... BP 0.078218580113803 FWA//TCH4//ATGSL09//DAF1//AT4G08410//AT59//ATCHX15//AT1G23720//AT2G10970//LCR72 GO:0000003 reproduction BP 0.0796631200911001 ATHDA6//ATHVA22B//APUM18//ATGSL09//COP13//DAF1//AT1G72270//APFI//PCR11 GO:0006970 response to osmotic stress BP 0.0833430716155774 ATHDA6//ATHVA22B//AtFBA8//AT4G28770//ASAR1//CBL5//AT3G27240//APFI//ATRAB7//PARG1//ATGSTF5 GO:0000338 protein deneddylation BP 0.0834738317757176 ATHDA6//COP13//ATUBP6 GO:0010388 cullin deneddylation BP 0.0834738317757176 ATHDA6//COP13//ATUBP6