GOID TERM ONTOLOGY pValue Genes GO:0009808 lignin metabolic process BP 0.00411725846694822 ATLAC17//LAC11//ATCAD9 GO:0046271 phenylpropanoid catabolic process BP 0.00673240283547959 ATLAC17//LAC11 GO:0046274 lignin catabolic process BP 0.00673240283547959 ATLAC17//LAC11 GO:0071554 cell wall organization or biogenesis BP 0.00739269473213131 LRP1//ATLAC17//AtXTH13//LAC11//ATSYP72//XCP1//GALS3//AGL104//AT3G26110//ATFUT9//AGC1.7 GO:0048468 cell development BP 0.0109558858995944 LRP1//SHA1//AtXTH13//ATSYP72//XCP1//AGL104//AGC1.7//ELF8 GO:0030154 cell differentiation BP 0.0166155222014651 LRP1//AtTCP11//SHA1//AtXTH13//ATSYP72//XCP1//AGL104//AT1G63200//AGC1.7//ELF8 GO:0009809 lignin biosynthetic process BP 0.0182288857887493 ATLAC17//ATCAD9 GO:0009827 plant-type cell wall modification BP 0.0187754835611966 ATSYP72//AGL104//AT3G26110//AGC1.7 GO:0010410 hemicellulose metabolic process BP 0.0203352300066446 ATLAC17//AtXTH13//LAC11//XCP1 GO:0046365 monosaccharide catabolic process BP 0.0226025011727314 ATMPK8//XK-1 GO:0006869 lipid transport BP 0.0254408423130712 AT5G38670//AT5G04420//LTPG1 GO:0010383 cell wall polysaccharide metabolic proce... BP 0.0334794856642022 ATLAC17//AtXTH13//LAC11//XCP1 GO:0042546 cell wall biogenesis BP 0.0340606458760832 ATLAC17//LAC11//XCP1//GALS3//ATFUT9 GO:0044264 cellular polysaccharide metabolic proces... BP 0.0355176252468875 SHA1//ATLAC17//AtXTH13//LAC11//XCP1//ATSUS3//ATCSLB01 GO:0000904 cell morphogenesis involved in different... BP 0.0382729887608705 LRP1//ATSYP72//AGL104//AGC1.7//ELF8 GO:0009698 phenylpropanoid metabolic process BP 0.0508479527543834 ATLAC17//LAC11//ATCAD9 GO:0010431 seed maturation BP 0.0508479527543834 ATSUS3//TRM3//AT1G03890 GO:0009740 gibberellic acid mediated signaling path... BP 0.0519499431324757 ABC33//TRM3 GO:0010476 gibberellin mediated signaling pathway BP 0.0519499431324757 ABC33//TRM3 GO:0034637 cellular carbohydrate biosynthetic proce... BP 0.0555981161949951 SHA1//ATLAC17//LAC11//XCP1//ATSUS3//ATCSLB01 GO:0071370 cellular response to gibberellin stimulu... BP 0.0562392928372559 ABC33//TRM3 GO:0005976 polysaccharide metabolic process BP 0.064800023980678 SHA1//ATLAC17//AtXTH13//LAC11//XCP1//ATSUS3//ATCSLB01 GO:0048869 cellular developmental process BP 0.0661746977043908 LRP1//AtTCP11//SHA1//AtXTH13//ATSYP72//XCP1//AGL104//AT1G63200//AGC1.7//ELF8 GO:0010413 glucuronoxylan metabolic process BP 0.0682689100414914 ATLAC17//LAC11//XCP1 GO:0045492 xylan biosynthetic process BP 0.0682689100414914 ATLAC17//LAC11//XCP1 GO:0044036 cell wall macromolecule metabolic proces... BP 0.0707402139035525 ATLAC17//AtXTH13//LAC11//XCP1 GO:0044699 single-organism process BP 0.0715110330836185 LRP1//PRK6//AtTCP11//AT5G26190//SHA1//APC1//ATLAC17//AtXTH13//SUV2//AT5G38670//AT5G04420//LAC11//AT5G01380//IAA30//LHCA1//KICP-02//ATSYP72//ATCAD9//XCP1//anac071//AT4G08310//AtRbcX1//ABC33//ATSUS3//ATT1//TRM3//AGL104//E12A11//ATMPK8//TMK1//AT3G22490//AT2G41050//FAC19//LTPG1//AT1G63200//AT1G29670//AT1G09310//XK-1//AT2G21830//RUS2//ATLUP1//AGC1.7//AT1G03890//ELF8//ATBZIP34//AT2G37900//AT2G39040//ATCSLB01//AT2G30830 GO:0045491 xylan metabolic process BP 0.0726302478794242 ATLAC17//LAC11//XCP1 GO:0044038 cell wall macromolecule biosynthetic pro... BP 0.0756060863536925 ATLAC17//LAC11//XCP1 GO:0070589 cellular component macromolecule biosynt... BP 0.0756060863536925 ATLAC17//LAC11//XCP1 GO:0070592 cell wall polysaccharide biosynthetic pr... BP 0.0756060863536925 ATLAC17//LAC11//XCP1 GO:0005986 sucrose biosynthetic process BP 0.0804730921129109 521_ GO:0044262 cellular carbohydrate metabolic process BP 0.0837631182164646 SHA1//ATLAC17//AtXTH13//LAC11//XCP1//ATSUS3//ATCSLB01 GO:0071669 plant-type cell wall organization or bio... BP 0.0841977402835402 ATLAC17//ATSYP72//AGL104//AT3G26110//AGC1.7 GO:0009860 pollen tube growth BP 0.0864390001149927 ATSYP72//AGL104//AGC1.7 GO:0010876 lipid localization BP 0.0864390001149927 AT5G38670//AT5G04420//LTPG1 GO:0010411 xyloglucan metabolic process BP 0.0881600545150393 914_ GO:0042545 cell wall modification BP 0.0893664561337717 ATSYP72//AGL104//AT3G26110//AGC1.7 GO:0001101 response to acid chemical BP 0.0979356315012447 AtTCP11//SHA1//AtRbcX1//ABC33//ATSUS3//TRM3//E12A11//ATMPK8//AT1G29670//ERD14 GO:0009664 plant-type cell wall organization BP 0.0994888849328839 ATSYP72//AGL104//AT3G26110//AGC1.7 GO:0033692 cellular polysaccharide biosynthetic pro... BP 0.0996991270732266 SHA1//ATLAC17//LAC11//XCP1//ATCSLB01 GO:0044767 single-organism developmental process BP 0.102416726478637 LRP1//AtTCP11//SHA1//AtXTH13//IAA30//ATSYP72//XCP1//anac071//AT4G08310//ATSUS3//TRM3//AGL104//E12A11//AT3G22490//FAC19//AT1G63200//AT1G29670//AGC1.7//AT1G03890//ELF8//ATBZIP34 GO:0006862 nucleotide transport BP 0.110842604237994 498_ GO:1901264 carbohydrate derivative transport BP 0.110842604237994 498_ GO:0009699 phenylpropanoid biosynthetic process BP 0.118443332255743 ATLAC17//ATCAD9 GO:0048868 pollen tube development BP 0.118867833924612 ATSYP72//AGL104//AGC1.7 GO:0032502 developmental process BP 0.121440460733304 LRP1//AtTCP11//SHA1//AtXTH13//IAA30//ATSYP72//XCP1//anac071//AT4G08310//ATSUS3//TRM3//AGL104//E12A11//AT3G22490//FAC19//AT1G63200//AT1G29670//AGC1.7//AT1G03890//ELF8//ATBZIP34 GO:0009414 response to water deprivation BP 0.125551629641721 AtRbcX1//ATSUS3//AT1G29670//ERD14 GO:0005985 sucrose metabolic process BP 0.125654129201368 521_ GO:0048609 multicellular organismal reproductive pr... BP 0.126206305140024 ATSUS3//TRM3//AT1G03890 GO:0006722 triterpenoid metabolic process BP 0.132968349689622 100_ GO:0016104 triterpenoid biosynthetic process BP 0.132968349689622 100_ GO:0019742 pentacyclic triterpenoid metabolic proce... BP 0.132968349689622 100_ GO:0019745 pentacyclic triterpenoid biosynthetic pr... BP 0.132968349689622 100_ GO:0045786 negative regulation of cell cycle BP 0.132968349689622 956_ GO:0046685 response to arsenic-containing substance BP 0.132968349689622 073_ GO:0010310 regulation of hydrogen peroxide metaboli... BP 0.13518953048979 AtTCP11//SHA1 GO:0051093 negative regulation of developmental pro... BP 0.13518953048979 SHA1//ELF8 GO:0009415 response to water BP 0.135825283171422 AtRbcX1//ATSUS3//AT1G29670//ERD14 GO:0010583 response to cyclopentenone BP 0.13803111447829 AT5G01380//IAA30 GO:0009910 negative regulation of flower developmen... BP 0.140222204084531 522_ GO:0019321 pentose metabolic process BP 0.147416183833259 773_ GO:2000377 regulation of reactive oxygen species me... BP 0.152430527523246 AtTCP11//SHA1 GO:0032504 multicellular organism reproduction BP 0.153108702188291 ATSUS3//TRM3//AT1G03890 GO:2000242 negative regulation of reproductive proc... BP 0.154550776437164 522_ GO:0071229 cellular response to acid chemical BP 0.155345058275522 AtTCP11//SHA1//ABC33//TRM3//AT1G29670 GO:0009739 response to gibberellin BP 0.158272208897891 ABC33//TRM3 GO:0009856 pollination BP 0.161111480683854 ATSYP72//AGL104//AGC1.7 GO:0044706 multi-multicellular organism process BP 0.161111480683854 ATSYP72//AGL104//AGC1.7 GO:0035304 regulation of protein dephosphorylation BP 0.161209057556616 AtTCP11//SHA1 GO:0000271 polysaccharide biosynthetic process BP 0.16615224379784 SHA1//ATLAC17//LAC11//XCP1//ATCSLB01 GO:0000902 cell morphogenesis BP 0.16615224379784 LRP1//ATSYP72//AGL104//AGC1.7//ELF8 GO:0055114 oxidation-reduction process BP 0.166351761814691 AT5G26190//ATLAC17//LAC11//ATCAD9//ATT1//AT2G21830//AT2G39040//AT2G30830 GO:0006928 movement of cell or subcellular componen... BP 0.167112907151832 APC1//KICP-02 GO:0035303 regulation of dephosphorylation BP 0.167112907151832 AtTCP11//SHA1 GO:0048316 seed development BP 0.167524356305385 IAA30//ATSUS3//TRM3//AT3G22490//AT1G03890 GO:0016579 protein deubiquitination BP 0.168643730674113 522_ GO:0006073 cellular glucan metabolic process BP 0.171847783059151 SHA1//AtXTH13//ATSUS3//ATCSLB01 GO:0044042 glucan metabolic process BP 0.171847783059151 SHA1//AtXTH13//ATSUS3//ATCSLB01 GO:0000338 protein deneddylation BP 0.175603047860777 522_ GO:0009269 response to desiccation BP 0.175603047860777 749_ GO:0010388 cullin deneddylation BP 0.175603047860777 522_ GO:0015748 organophosphate ester transport BP 0.175603047860777 498_ GO:0010090 trichome morphogenesis BP 0.179031111755662 LRP1//ELF8 GO:0032501 multicellular organismal process BP 0.182553316051344 LRP1//AtTCP11//SHA1//AtXTH13//IAA30//ATSYP72//anac071//AT4G08310//ATSUS3//TRM3//AGL104//E12A11//AT3G22490//FAC19//AT1G29670//AGC1.7//AT1G03890//ELF8//ATBZIP34 GO:0016051 carbohydrate biosynthetic process BP 0.185075601419557 SHA1//ATLAC17//LAC11//XCP1//ATSUS3//ATCSLB01 GO:0010154 fruit development BP 0.185769902356548 IAA30//ATSUS3//TRM3//AT3G22490//AT1G03890 GO:0071555 cell wall organization BP 0.188641597866415 LRP1//ATSYP72//AGL104//AT3G26110//AGC1.7 GO:0006007 glucose catabolic process BP 0.189349722541228 075_ GO:0051645 Golgi localization BP 0.189349722541228 498_ GO:0051646 mitochondrion localization BP 0.189349722541228 498_ GO:0060151 peroxisome localization BP 0.189349722541228 498_ GO:0009718 anthocyanin-containing compound biosynth... BP 0.196138012745138 331_ GO:0019320 hexose catabolic process BP 0.196138012745138 075_ GO:0044723 single-organism carbohydrate metabolic p... BP 0.196533155749387 SHA1//ATLAC17//LAC11//XCP1//ATSUS3//ATMPK8//XK-1//ATCSLB01 GO:0071702 organic substance transport BP 0.198697459813551 AtTCP11//SHA1//APC1//AT5G38670//AT5G04420//ATSYP72//LTPG1//AT2G37900 GO:0010638 positive regulation of organelle organiz... BP 0.200185280313831 LRP1//ELF8 GO:0051130 positive regulation of cellular componen... BP 0.200185280313831 LRP1//ELF8 GO:0009932 cell tip growth BP 0.2007246012527 ATSYP72//AGL104//AGC1.7 GO:0046351 disaccharide biosynthetic process BP 0.202870220424728 521_