GOID TERM ONTOLOGY pValue Genes GO:0008610 lipid biosynthetic process BP 8.99303345585662e-05 DGS1//AT4G17790//CP1//CLPP4//TSC10B//CLS//MEE51//AT2G33630//LAG1//AT3G23460//MCC1//AT1G36380//AT1G67600//AT1G16040//ATPLMT//PSS1//AT2G21180//ATTPS14//NPG1//ANAC040//ACPT GO:0006643 membrane lipid metabolic process BP 0.00123302409806258 DGS1//AT5G42660//TSC10B//MEE51//LAG1//MCC1//AT1G67600//AT1G16040 GO:0040029 regulation of gene expression, epigeneti... BP 0.00194685257941951 AT3G56870//AT1G77310//ATDDM1//POLA3//AtAUR1//ATSUVH2//ETG1//ATNBS1//POLD3//HDA13 GO:0046467 membrane lipid biosynthetic process BP 0.0022368881256511 DGS1//TSC10B//MEE51//LAG1//MCC1//AT1G67600//AT1G16040 GO:0044255 cellular lipid metabolic process BP 0.00238120509533064 DGS1//AT4G17790//CP1//CLPP4//AT5G42660//TSC10B//CLS//MEE51//LAG1//MCC1//AT1G36380//AT1G67600//AT1G16040//ATPLMT//PSS1//AT2G21180//ATTPS14//ATECI1//ANAC040//AT2G41020//ACPT GO:0006473 protein acetylation BP 0.00246856350989611 ATDDM1//MCC1//HAT9 GO:0016444 somatic cell DNA recombination BP 0.0029593829578677 ETG1//ATNBS1//POLD3 GO:0006629 lipid metabolic process BP 0.00418042215083435 DGS1//AT4G17790//CP1//CLPP4//AT5G42660//TSC10B//CLS//MEE51//AT2G33630//LAG1//AT3G23460//MCC1//AT1G36380//AT1G67600//AT1G16040//ATPLMT//PSS1//AT2G21180//ATTPS14//ATECI1//NPG1//ANAC040//AT2G41020//ACPT GO:0010629 negative regulation of gene expression BP 0.00435941117752759 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ETG1//ATNBS1//MCC1//AT1G67600//POLD3//HDA13 GO:0031047 gene silencing by RNA BP 0.00474579201317889 AT3G56870//AT1G77310//ATDDM1//ETG1//ATNBS1//POLD3//HDA13 GO:0009892 negative regulation of metabolic process BP 0.00474986351116701 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AT5G58820//AtAUR1//ETG1//ATNBS1//MCC1//AT1G67600//ATPTP1//POLD3//HDA13 GO:0010605 negative regulation of macromolecule met... BP 0.00481908363850293 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ETG1//ATNBS1//MCC1//AT1G67600//ATPTP1//POLD3//HDA13 GO:0008654 phospholipid biosynthetic process BP 0.00509504484864446 AT4G17790//CLPP4//CLS//AT1G36380//AT1G16040//ATPLMT//PSS1//AT2G21180 GO:0031048 chromatin silencing by small RNA BP 0.00596646478100589 AT3G56870//AT1G77310//ATDDM1//ATNBS1 GO:0051276 chromosome organization BP 0.00760576157646311 DGS1//AT3G56870//AT1G77310//ATDDM1//ABCB25//POLA3//ATEIF3G2//AtAUR1//ATSUVH2//ETG1//ATNBS1//MCC1//POLD3//AtPol{lambda} GO:0044710 single-organism metabolic process BP 0.00774525945650194 DGS1//ATOPT3//AT4G17790//AT4G15260//CYP84A4//AT5G19760//AAT2//IRX14//CP1//NAPRT1//AT3G56870//AT3G56840//AT5G17560//ATLOG9//ATDDM1//ABCB25//AtGulLO7//CLPP4//AT5G42660//POLA3//TSC10B//AT5G15120//CSY5//AT3G51140//AT3G49640//APX5//AT4G33870//AtAUR1//VPS26B//HAP6//CYP706A4//AT4G10490//CLS//MEE51//ATSUVH2//AT2G33630//ETG1//AT1G29870//ATPQ//AT3G24200//AT2G17970//DDI1//LAG1//bHLH34//AT3G23460//ATNBS1//GF14//MCC1//MPPBETA//AT1G36380//AT1G67600//ATIPT1//ATGPX3//ATQSOX1//sks7//ATPTP1//AT1G16040//ATPLMT//ATCOX6B2//PSS1//POLD3//AT2G31390//AtPol{lambda}//AT2G21180//ATTPS14//ATECI1//ATGTF2H2//AT2G02050//NPG1//ANAC040//HDA13//ARAD1//AT2G41020//ACPT//ATWHY3 GO:0016458 gene silencing BP 0.00796229755333204 AT3G56870//AT1G77310//ATDDM1//AtAUR1//ETG1//ATNBS1//POLD3//HDA13 GO:0010638 positive regulation of organelle organiz... BP 0.00824300135531927 DGS1//IRX14//ATDDM1//ATNBS1 GO:0051052 regulation of DNA metabolic process BP 0.00875375403291376 AT3G56870//ATDDM1//EMB2812//ETG1//ATNBS1//POLD3 GO:1902589 single-organism organelle organization BP 0.00899102614445845 DGS1//IRX14//AT3G56870//AT1G77310//ATDDM1//ATK3//CLPP4//POLA3//AtAUR1//ATSUVH2//ETG1//ATNBS1//MCC1//ATIPT1//AtPol{lambda}//TOM20-2//AT2G41020 GO:0045892 negative regulation of transcription, DN... BP 0.00978522144276937 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1//MCC1//AT1G67600 GO:0051253 negative regulation of RNA metabolic pro... BP 0.00978522144276937 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1//MCC1//AT1G67600 GO:1902679 negative regulation of RNA biosynthetic ... BP 0.00978522144276937 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1//MCC1//AT1G67600 GO:1903507 negative regulation of nucleic acid-temp... BP 0.00978522144276937 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1//MCC1//AT1G67600 GO:0051130 positive regulation of cellular componen... BP 0.011025275837804 DGS1//IRX14//ATDDM1//ATNBS1 GO:0009247 glycolipid biosynthetic process BP 0.0127856283772945 DGS1//MEE51//MCC1//AT1G67600//AT1G16040 GO:0045934 negative regulation of nucleobase-contai... BP 0.0130794917580847 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1//MCC1//AT1G67600 GO:0006644 phospholipid metabolic process BP 0.0134901896866584 AT4G17790//CLPP4//CLS//AT1G36380//AT1G16040//ATPLMT//PSS1//AT2G21180 GO:0010558 negative regulation of macromolecule bio... BP 0.0139102552163904 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1//MCC1//AT1G67600 GO:0051172 negative regulation of nitrogen compound... BP 0.0139102552163904 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1//MCC1//AT1G67600 GO:2000113 negative regulation of cellular macromol... BP 0.0139102552163904 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1//MCC1//AT1G67600 GO:0018193 peptidyl-amino acid modification BP 0.0141114425105555 DGS1//AT3G56870//ATDDM1//POLA3//AtAUR1//HAP6//ATSUVH2//ETG1//MCC1 GO:0010090 trichome morphogenesis BP 0.0143507452379704 DGS1//IRX14//ETG1//ATNBS1 GO:0007049 cell cycle BP 0.0150069535393272 AT3G56870//AT1G77310//ATK3//EMB2812//SAP//AtAUR1//ETG1//ATNBS1//MCC1//ATIPT1//POLD3//AtPol{lambda}//POP4 GO:0031327 negative regulation of cellular biosynth... BP 0.0156865230974923 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1//MCC1//AT1G67600 GO:0018205 peptidyl-lysine modification BP 0.0161551684860785 DGS1//AT3G56870//ATDDM1//POLA3//AtAUR1//ATSUVH2//ETG1//MCC1 GO:0009890 negative regulation of biosynthetic proc... BP 0.01663387363909 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1//MCC1//AT1G67600 GO:0006475 internal protein amino acid acetylation BP 0.0177808999238762 ATDDM1//MCC1 GO:0016573 histone acetylation BP 0.0177808999238762 ATDDM1//MCC1 GO:0018393 internal peptidyl-lysine acetylation BP 0.0177808999238762 ATDDM1//MCC1 GO:0018394 peptidyl-lysine acetylation BP 0.0177808999238762 ATDDM1//MCC1 GO:0048506 regulation of timing of meristematic pha... BP 0.0177808999238762 CLPP4//AT1G35560 GO:0048510 regulation of timing of transition from ... BP 0.0177808999238762 CLPP4//AT1G35560 GO:0006270 DNA replication initiation BP 0.0178355653489485 EMB2812//ETG1//POLD3 GO:0006664 glycolipid metabolic process BP 0.0178406284000159 DGS1//MEE51//MCC1//AT1G67600//AT1G16040 GO:0051567 histone H3-K9 methylation BP 0.0178406284000159 AT3G56870//ATDDM1//POLA3//AtAUR1//ETG1 GO:0061647 histone H3-K9 modification BP 0.0178406284000159 AT3G56870//ATDDM1//POLA3//AtAUR1//ETG1 GO:0031324 negative regulation of cellular metaboli... BP 0.0183837066089045 AT4G36750//AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1//MCC1//AT1G67600//ATPTP1 GO:1903509 liposaccharide metabolic process BP 0.0186563756424644 DGS1//MEE51//MCC1//AT1G67600//AT1G16040 GO:0016568 chromatin modification BP 0.0188575627672999 AT3G56870//ATDDM1//POLA3//AtAUR1//ATSUVH2//ETG1//ATNBS1//MCC1//POLD3 GO:0010026 trichome differentiation BP 0.0193191863477694 DGS1//IRX14//ETG1//ATNBS1 GO:0046474 glycerophospholipid biosynthetic process BP 0.0203608131206981 AT4G17790//AT1G36380//AT1G16040//PSS1//AT2G21180 GO:0006342 chromatin silencing BP 0.022164170564959 AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1 GO:0051321 meiotic cell cycle BP 0.0228094938015865 AT1G77310//SAP//ATNBS1//MCC1//ATIPT1//AtPol{lambda} GO:0045814 negative regulation of gene expression, ... BP 0.0231035359622636 AT3G56870//AT1G77310//ATDDM1//AtAUR1//ATNBS1 GO:0033044 regulation of chromosome organization BP 0.0239737875458951 DGS1//ATDDM1//ATNBS1//AtPol{lambda} GO:0006261 DNA-dependent DNA replication BP 0.0240683241588038 EMB2812//POLA3//HMGB6//ETG1//POLD3 GO:0016571 histone methylation BP 0.0246614629935976 AT3G56870//ATDDM1//POLA3//AtAUR1//ATSUVH2//ETG1//ATNBS1 GO:0016570 histone modification BP 0.0250962646060085 AT3G56870//ATDDM1//POLA3//AtAUR1//ATSUVH2//ETG1//ATNBS1//MCC1 GO:0007062 sister chromatid cohesion BP 0.0252344561313321 AT1G77310//ETG1//ATNBS1//AtPol{lambda} GO:0000724 double-strand break repair via homologou... BP 0.026232620620274 ETG1//ATNBS1//POLD3 GO:0000725 recombinational repair BP 0.026232620620274 ETG1//ATNBS1//POLD3 GO:0006665 sphingolipid metabolic process BP 0.026232620620274 AT5G42660//TSC10B//LAG1 GO:0055114 oxidation-reduction process BP 0.0263876434622345 CYP84A4//AT5G19760//AT3G56840//AtGulLO7//AT5G15120//CSY5//AT3G49640//APX5//AT4G33870//CYP706A4//AT4G10490//AT2G33630//AT3G24200//AT2G17970//ATGPX3//ATQSOX1//sks7//ATCOX6B2//AT2G31390//ATECI1//AT2G02050//AT2G41020 GO:0018022 peptidyl-lysine methylation BP 0.0269792955301389 AT3G56870//ATDDM1//POLA3//AtAUR1//ATSUVH2//ETG1 GO:0034968 histone lysine methylation BP 0.0269792955301389 AT3G56870//ATDDM1//POLA3//AtAUR1//ATSUVH2//ETG1 GO:0015980 energy derivation by oxidation of organi... BP 0.0281858296799229 AT5G19760//AT5G15120//CSY5//AT2G31390//AT2G02050 GO:0006302 double-strand break repair BP 0.0292531095482791 ETG1//ATNBS1//POLD3//AtPol{lambda} GO:0006661 phosphatidylinositol biosynthetic proces... BP 0.0292531095482791 AT4G17790//AT1G36380//AT1G16040//AT2G21180 GO:0006479 protein methylation BP 0.0300624610290725 AT3G56870//ATDDM1//POLA3//AtAUR1//ATSUVH2//ETG1//ATNBS1 GO:0008213 protein alkylation BP 0.0300624610290725 AT3G56870//ATDDM1//POLA3//AtAUR1//ATSUVH2//ETG1//ATNBS1 GO:0006275 regulation of DNA replication BP 0.0306721691648295 AT3G56870//EMB2812//ETG1//POLD3 GO:0016569 covalent chromatin modification BP 0.0329612006843036 AT3G56870//ATDDM1//POLA3//AtAUR1//ATSUVH2//ETG1//ATNBS1//MCC1 GO:0007126 meiotic nuclear division BP 0.0351568887800862 AT1G77310//ATNBS1//MCC1//ATIPT1//AtPol{lambda} GO:0033043 regulation of organelle organization BP 0.0351568887800862 DGS1//IRX14//ATDDM1//ATNBS1//AtPol{lambda} GO:0045017 glycerolipid biosynthetic process BP 0.0351568887800862 AT4G17790//AT1G36380//AT1G16040//PSS1//AT2G21180 GO:0006325 chromatin organization BP 0.0358261817787371 AT3G56870//ATDDM1//POLA3//ATEIF3G2//AtAUR1//ATSUVH2//ETG1//ATNBS1//MCC1//POLD3 GO:0019375 galactolipid biosynthetic process BP 0.0367496593910996 DGS1//MEE51//MCC1//AT1G67600 GO:0034470 ncRNA processing BP 0.0367684688613199 CLPP4//AT3G51140//AT3G49640//HAP6//ATIPT1//POP4 GO:0043094 cellular metabolic compound salvage BP 0.037857451736899 NAPRT1//ATPQ//MPPBETA//ATCOX6B2//AT2G02050//RPS14 GO:0019374 galactolipid metabolic process BP 0.0383698027626567 DGS1//MEE51//MCC1//AT1G67600 GO:0044764 multi-organism cellular process BP 0.0425497604344345 ATDDM1//TOM2B GO:0006305 DNA alkylation BP 0.0452546782166909 ATDDM1//POLA3//ETG1//POLD3 GO:0006306 DNA methylation BP 0.0452546782166909 ATDDM1//POLA3//ETG1//POLD3 GO:0044728 DNA methylation or demethylation BP 0.0452546782166909 ATDDM1//POLA3//ETG1//POLD3 GO:0034660 ncRNA metabolic process BP 0.0452673653335999 CLPP4//AT3G51140//AT3G49640//HAP6//AT1G29870//ATIPT1//POP4 GO:0006304 DNA modification BP 0.047076929488008 ATDDM1//POLA3//ETG1//POLD3 GO:0006399 tRNA metabolic process BP 0.0489395100888868 AT3G51140//AT3G49640//AT1G29870//ATIPT1 GO:0006650 glycerophospholipid metabolic process BP 0.0489651956096728 AT4G17790//AT1G36380//AT1G16040//PSS1//AT2G21180 GO:0006289 nucleotide-excision repair BP 0.0510888318852474 AtPol{lambda}//ATGTF2H2 GO:0000278 mitotic cell cycle BP 0.0520495537146209 AT3G56870//ATK3//AtAUR1//ETG1//ATNBS1//POLD3//POP4 GO:0040034 regulation of development, heterochronic BP 0.0555689857370244 CLPP4//AT1G35560 GO:0006259 DNA metabolic process BP 0.0566052755365962 AT3G56870//ATDDM1//EMB2812//POLA3//HMGB6//ETG1//ATNBS1//ATIPT1//POLD3//AtPol{lambda}//ATGTF2H2//ATWHY3 GO:0006857 oligopeptide transport BP 0.0567913791699287 ATOPT3//ATYSL3//AtWRKY47//AT1G27930 GO:0015833 peptide transport BP 0.0567913791699287 ATOPT3//ATYSL3//AtWRKY47//AT1G27930 GO:0090626 plant epidermis morphogenesis BP 0.058854144082196 DGS1//IRX14//ETG1//ATNBS1 GO:0016572 histone phosphorylation BP 0.0601813831510209 ATDDM1//AtAUR1 GO:0042886 amide transport BP 0.0609565335589476 ATOPT3//ATYSL3//AtWRKY47//AT1G27930 GO:0008152 metabolic process BP 0.0612056147382158 DGS1//ATOPT3//AT4G17790//AT4G15260//CYP84A4//AT5G19760//AAT2//AT4G36750//AP2//IRX14//CP1//NAPRT1//AT3G56870//AT3G56840//AT1G77310//AT5G17560//IAA28//ATLOG9//ATDDM1//AT5G58820//ABCB25//AtGulLO7//EMB2812//CLPP4//AT5G44080//AT5G42660//AT5G42720//POLA3//anac095//HMGB6//TSC10B//AT5G15120//SSP5//ATEIF3G2//HAT3//CSY5//AT3G51140//AT3G49640//TOPP5//AT4G35880//APX5//AT4G33870//AtAUR1//AT4G29530//AT4G28180//VPS26B//AT4G24300//AT4G24440//HAP6//PYR1//CYP706A4//AT4G10490//AT4G08280//CLS//MEE51//AtWRKY47//ATSUVH2//AT2G33630//ETG1//AT1G29870//AT1G66620//ATPQ//AT3G24200//AT2G17970//AT1G22910//AT3G14490//DDI1//LAG1//bHLH34//AT3G23460//AT3G16700//ATNBS1//GF14//MCC1//MPPBETA//PAP2//AT1G63290//AT1G36380//AT1G67600//ATIPT1//ATGPX3//ATQSOX1//DRIP1//sks7//AT1G37000//ATPTP1//AT1G16040//ATPLMT//ATCOX6B2//AT1G35560//ATDEF1//PSS1//POLD3//AT2G31390//AtPol{lambda}//PS2//AT2G04900//AT2G21180//AT2G03770//ATTPS14//ATECI1//AT1G70250//ATGTF2H2//AT2G02050//NPG1//AT2G20330//AT2G42980//ANAC040//AT2G27630//HDA13//AT2G43180//POP4//ARAD1//AT2G23890//HAT9//RPS14//AT2G41020//ACPT//ATWHY3 GO:0006996 organelle organization BP 0.0629803661428021 DGS1//IRX14//AT3G56870//AT1G16560//AT1G77310//ATDDM1//ABCB25//ATK3//CLPP4//POLA3//ATEIF3G2//ATVAMP727//AT3G51140//AtAUR1//ATSUVH2//ETG1//ATNBS1//MCC1//ATIPT1//POLD3//AtPol{lambda}//AT1G54770//TOM20-2//AT2G20330//AT2G41020