GOID TERM ONTOLOGY pValue Genes GO:0015979 photosynthesis BP 1.53283397663323e-15 NAD4L//RPL32//YCF5//RPS18//PSBJ//PSBI//AT2G26500//BETA//MSP-1//AT5G58330//LIL3:2//APE2//G6PD1//HCF136//ENH1//PMDH2//AT5G08050//CP12//ACSF//HCEF1//AT3G47650//AT3G47070//SEP1//PETC//AtCHUP1//HCF101//NAD5//PGK1//HCF107//ADS3//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//CCB4//AT1G54500//LQY1//PSBR//ATHM1//AT1G77090//PSBX//OTP51//ALB3//GDCH//AT2G35410//PSAP//AT2G44920//PSBW GO:0006364 rRNA processing BP 6.69925594224118e-13 AT2G26500//TOZ//AT5G16130//EMB2247//AT5G15550//MSP-1//AT5G58330//HCF136//ENH1//ATTIC40//PMDH2//ACSF//HCEF1//AT3G47650//AT3G47070//SEP1//PETC//AtCHUP1//HCF101//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//LQY1//ATHM1//ALB3//GDCH//AT2G35410//PSAP//PSBW GO:0016072 rRNA metabolic process BP 6.69925594224118e-13 AT2G26500//TOZ//AT5G16130//EMB2247//AT5G15550//MSP-1//AT5G58330//HCF136//ENH1//ATTIC40//PMDH2//ACSF//HCEF1//AT3G47650//AT3G47070//SEP1//PETC//AtCHUP1//HCF101//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//LQY1//ATHM1//ALB3//GDCH//AT2G35410//PSAP//PSBW GO:0034470 ncRNA processing BP 1.59664112009293e-11 AT2G26500//TOZ//AT5G16130//EMB2247//AT5G15550//MSP-1//AT5G58330//HCF136//ENH1//ATTIC40//PMDH2//ACSF//HCEF1//AT3G47650//AT3G47070//SEP1//PETC//AtCHUP1//HCF101//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//LQY1//ATHM1//ALB3//GDCH//AT2G35410//PSAP//PSBW GO:0019684 photosynthesis, light reaction BP 1.93289117598992e-11 YCF5//RPS18//PSBI//AT2G26500//BETA//MSP-1//AT5G58330//LIL3:2//APE2//HCF136//ENH1//PMDH2//AT5G08050//ACSF//HCEF1//AT3G47650//SEP1//PETC//AtCHUP1//PGK1//HCF107//ADS3//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//CCB4//AT1G54500//LQY1//PSBR//ATHM1//OTP51//ALB3//GDCH//PSAP//PSBW GO:0010207 photosystem II assembly BP 2.23661051708208e-11 RPS18//PSBI//AT2G26500//MSP-1//AT5G58330//HCF136//ENH1//PMDH2//ACSF//HCEF1//AT3G47650//SEP1//PETC//AtCHUP1//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//CCB4//LQY1//PSBR//ATHM1//ALB3//GDCH//PSAP//PSBW GO:0042254 ribosome biogenesis BP 6.14500338151585e-11 AT2G26500//TOZ//AT5G16130//EMB2247//AT5G15550//MSP-1//AT5G58330//HCF136//ENH1//ATTIC40//PMDH2//ACSF//HCEF1//AT3G47650//AT3G47070//SEP1//PETC//AtCHUP1//HCF101//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//LQY1//ATHM1//ALB3//GDCH//AT2G35410//PSAP//PSBW GO:0009657 plastid organization BP 6.87884445012619e-11 AT2G26500//DHAR3//EMB2247//APG6//MSP-1//AT5G58330//CAA33//HCF136//ENH1//ATTIC40//ATDEF2//PMDH2//AT5G08050//ATEGY2//ACSF//HCEF1//ATSSL4//AT3G47650//AT3G47070//SEP1//AT4G26370//PETC//AtCHUP1//HCF101//PGK1//HCF107//PSAH-1//ATHPR1//AT1G36390//AT1G32470//ATLFNR2//LQY1//ATHM1//ALB3//GDCH//AT2G35410//PSAP//PSBW GO:0022613 ribonucleoprotein complex biogenesis BP 1.02687601047705e-10 AT2G26500//TOZ//AT5G16130//EMB2247//AT5G15550//MSP-1//AT5G58330//HCF136//ENH1//ATTIC40//PMDH2//ACSF//HCEF1//AT3G47650//AT3G47070//SEP1//PETC//AtCHUP1//HCF101//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//LQY1//ATHM1//ALB3//GDCH//AT2G35410//PSAP//PSBW GO:0006091 generation of precursor metabolites and ... BP 7.06707416382616e-10 NAD4L//COX2//RPL32//YCF5//RPS18//PSBI//AT2G26500//BETA//MSP-1//AT5G58330//LIL3:2//APE2//HCF136//ENH1//PMDH2//AT5G08050//AT3G59480//ACSF//HCEF1//AT3G47650//AFT//SEP1//PETC//AtCHUP1//NAD5//PGK1//HCF107//PIFI//ADS3//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//CCB4//AT1G54500//LQY1//PSBR//ATHM1//OTP51//ALB3//GDCH//PSAP//PSBW GO:0034660 ncRNA metabolic process BP 1.90208034898339e-09 AT2G26500//TOZ//AT5G16130//EMB2247//AT5G15550//MSP-1//AT5G58330//HCF136//ENH1//ATTIC40//PMDH2//ACSF//HCEF1//AT3G47650//AT3G47070//SEP1//PETC//AtCHUP1//HCF101//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//LQY1//ATHM1//ALB3//GDCH//AT2G35410//PSAP//PSBW GO:0006098 pentose-phosphate shunt BP 1.53836568906426e-08 G6PD1//HCF136//ENH1//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//PGK1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920 GO:0051156 glucose 6-phosphate metabolic process BP 1.53836568906426e-08 G6PD1//HCF136//ENH1//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//PGK1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920 GO:0006739 NADP metabolic process BP 1.76733914105205e-08 G6PD1//HCF136//ENH1//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//PGK1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920 GO:0019362 pyridine nucleotide metabolic process BP 2.65783057445137e-08 G6PD1//HCF136//ENH1//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//PGK1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920 GO:0046496 nicotinamide nucleotide metabolic proces... BP 2.65783057445137e-08 G6PD1//HCF136//ENH1//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//PGK1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920 GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 3.68332699088239e-08 G6PD1//HCF136//ENH1//PSY//ATDEF2//PMDH2//AT5G08050//ATEGY2//ATCCD1//ACSF//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//AT3G25805//PGK1//ADS3//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//AT2G35410//PSAP//AT2G44920//SCPL8 GO:0006081 cellular aldehyde metabolic process BP 3.81104817426973e-08 BETA//G6PD1//HCF136//ENH1//PSY//ATDEF2//PMDH2//AT5G08050//ATEGY2//MLS//ATCCD1//ACSF//AT3G56010//HCEF1//AT3G47650//SEP1//AT4G30620//PETC//AT3G22210//HCF101//AT3G25805//PGK1//ADS3//MAP1B//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//AT2G35410//PSAP//AT2G44920//SCPL8 GO:0072524 pyridine-containing compound metabolic p... BP 5.11097731917594e-08 G6PD1//HCF136//ENH1//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//PGK1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920 GO:0006733 oxidoreduction coenzyme metabolic proces... BP 1.12630593280609e-07 G6PD1//HCF136//ENH1//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//PGK1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920//SCPL8 GO:0051186 cofactor metabolic process BP 2.31935162018869e-07 G6PD1//HCF136//ENH1//PSY//LRR1//IPP1//BCCP//PMDH2//AT5G08050//ATCCD1//ACSF//AT3G56010//HCEF1//AT3G47650//SEP1//FKP1//PETC//AT3G22210//HCF101//PGK1//ADS3//ACLB-1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//ATTSPO//GDCH//AT2G35410//PSAP//AT2G44920//SCPL8 GO:0006732 coenzyme metabolic process BP 2.57492102901822e-07 G6PD1//HCF136//ENH1//LRR1//BCCP//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//FKP1//PETC//AT3G22210//HCF101//PGK1//ACLB-1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920//SCPL8 GO:0043623 cellular protein complex assembly BP 7.96096048043831e-07 YCF5//RPS18//PSBI//AT2G26500//MSP-1//AT5G58330//EXL3//HCF136//ENH1//PMDH2//ACSF//HCEF1//AT3G47650//SEP1//PETC//AtCHUP1//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//DUO3//CCB4//LQY1//PSBR//ATHM1//OTP51//ALB3//GDCH//PSAP//PSBW GO:0019693 ribose phosphate metabolic process BP 1.91344059237649e-06 ORF25//NAD4L//G6PD1//HCF136//ENH1//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//NAD5//PGK1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920//ASP1 GO:0034622 cellular macromolecular complex assembly BP 2.14867103782109e-06 YCF5//RPS18//PSBI//AT2G26500//ATSCC2//MSP-1//AT5G58330//EXL3//HCF136//ENH1//PMDH2//ACSF//HCEF1//AT3G47650//SEP1//PETC//AtCHUP1//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//DUO3//CCB4//LQY1//PSBR//ATHM1//OTP51//ALB3//GDCH//PSAP//PSBW GO:0022900 electron transport chain BP 2.85086624399167e-06 NAD4L//COX2//MSP-1//AT5G08050//HCEF1//AT3G47650//SEP1//PETC//NAD5//PIFI//ADS3//ATHPR1//ATLFNR2//AT1G54500//PSAP GO:0044085 cellular component biogenesis BP 8.55986028297451e-06 YCF5//RPS18//PSBI//AT2G26500//AT2G41610//TOZ//AT5G16130//EMB2247//AT5G15400//ATSCC2//AT5G15550//MSP-1//AT5G58330//XTH25//EXL3//HCF136//ENH1//ATTIC40//BCCP//PMDH2//ATEGY2//ACSF//HCEF1//AT3G47650//AT3G47070//DRL1//SEP1//AT4G26370//PETC//AtCHUP1//HCF101//HCF107//PSAH-1//ATHPR1//AtRABA6a//AT1G36390//AT1G32470//ATLFNR2//DUO3//BGAL17//CCB4//LQY1//PSBR//ATHM1//OTP51//ALB3//GDCH//AT2G35410//PSAP//PSBW GO:0022607 cellular component assembly BP 8.85966042226955e-06 YCF5//RPS18//PSBI//AT2G26500//EMB2247//ATSCC2//MSP-1//AT5G58330//EXL3//HCF136//ENH1//PMDH2//ATEGY2//ACSF//HCEF1//AT3G47650//DRL1//SEP1//AT4G26370//PETC//AtCHUP1//HCF101//HCF107//PSAH-1//ATHPR1//AT1G36390//AT1G32470//ATLFNR2//DUO3//CCB4//LQY1//PSBR//ATHM1//OTP51//ALB3//GDCH//PSAP//PSBW GO:0065003 macromolecular complex assembly BP 1.13787605350196e-05 YCF5//RPS18//PSBI//AT2G26500//ATSCC2//MSP-1//AT5G58330//EXL3//HCF136//ENH1//PMDH2//ACSF//HCEF1//AT3G47650//SEP1//PETC//AtCHUP1//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//DUO3//CCB4//LQY1//PSBR//ATHM1//OTP51//ALB3//GDCH//PSAP//PSBW GO:0019752 carboxylic acid metabolic process BP 1.35684404260375e-05 AtPLT6//AT5G16230//AT5G16240//EMB2247//ATPCME//BETA//MSP-1//FACT//AT5G58330//AT2353//LIL3:2//TET1//APE2//G6PD1//AT5G22820//GAD//AT5G17380//PSY//VAT1//AT5G16520//BCCP//ATDEF2//PMDH2//ATEGY2//MLS//ATCCD1//AT3G59710//AT3G59480//ACSF//AT3G56010//AT3G47650//AFT//SEP1//AT4G30620//AT4G26370//PETC//AT3G26450//HCF101//AT3G25805//PGK1//ADS3//CYP71B15//MAP1B//ATHPR1//AT1G35420//AT1G32470//ATLFNR2//BAH1//PSBR//ATBCAT-1//AT1G77090//AT2G14060//GDCH//AT2G35410//AT2G44920//ASP1//AT2G37700//SCPL8//FDH GO:0006461 protein complex assembly BP 1.49338928117432e-05 YCF5//RPS18//PSBI//AT2G26500//MSP-1//AT5G58330//EXL3//HCF136//ENH1//PMDH2//ACSF//HCEF1//AT3G47650//SEP1//PETC//AtCHUP1//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//DUO3//CCB4//LQY1//PSBR//ATHM1//OTP51//ALB3//GDCH//PSAP//PSBW GO:0070271 protein complex biogenesis BP 1.58233705369574e-05 YCF5//RPS18//PSBI//AT2G26500//MSP-1//AT5G58330//EXL3//HCF136//ENH1//PMDH2//ACSF//HCEF1//AT3G47650//SEP1//PETC//AtCHUP1//HCF107//PSAH-1//ATHPR1//AT1G32470//ATLFNR2//DUO3//CCB4//LQY1//PSBR//ATHM1//OTP51//ALB3//GDCH//PSAP//PSBW GO:0009668 plastid membrane organization BP 1.76101841833047e-05 DHAR3//EMB2247//MSP-1//HCF136//ATTIC40//ATDEF2//ATEGY2//ACSF//HCEF1//AT3G47070//AtCHUP1//HCF101//PGK1//HCF107//AT1G36390//ATHM1//ALB3//AT2G35410//PSAP GO:0010027 thylakoid membrane organization BP 1.76101841833047e-05 DHAR3//EMB2247//MSP-1//HCF136//ATTIC40//ATDEF2//ATEGY2//ACSF//HCEF1//AT3G47070//AtCHUP1//HCF101//PGK1//HCF107//AT1G36390//ATHM1//ALB3//AT2G35410//PSAP GO:0009240 isopentenyl diphosphate biosynthetic pro... BP 2.0412576353204e-05 G6PD1//PSY//IPP1//ATDEF2//PMDH2//ATEGY2//ATCCD1//ACSF//AT3G56010//AT3G47650//SEP1//FKP1//HCF101//AT3G25805//PGK1//ADS3//AT1G77090//AT2G35410//AT2G44920//SCPL8 GO:0046490 isopentenyl diphosphate metabolic proces... BP 2.0412576353204e-05 G6PD1//PSY//IPP1//ATDEF2//PMDH2//ATEGY2//ATCCD1//ACSF//AT3G56010//AT3G47650//SEP1//FKP1//HCF101//AT3G25805//PGK1//ADS3//AT1G77090//AT2G35410//AT2G44920//SCPL8 GO:0071822 protein complex subunit organization BP 2.48787567949329e-05 YCF5//RPS18//PSBI//AT2G26500//MSP-1//AT5G58330//EXL3//HCF136//ENH1//PMDH2//ACSF//HCEF1//AT3G47650//SEP1//PETC//AtCHUP1//HCF107//PSAH-1//TCTP//ATHPR1//AT1G32470//ATLFNR2//DUO3//CCB4//LQY1//PSBR//ATHM1//OTP51//ALB3//GDCH//PSAP//PSBW GO:0043436 oxoacid metabolic process BP 2.72942089777966e-05 AtPLT6//AT5G16230//AT5G16240//EMB2247//ATPCME//BETA//MSP-1//FACT//AT5G58330//AT2353//LIL3:2//TET1//APE2//G6PD1//AT5G22820//GAD//AT5G17380//PSY//VAT1//AT5G16520//BCCP//ATDEF2//PMDH2//ATEGY2//MLS//ATCCD1//AT3G59710//AT3G59480//ACSF//AT3G56010//AT3G47650//AFT//SEP1//AT4G30620//AT4G26370//PETC//AT3G26450//HCF101//AT3G25805//PGK1//ADS3//CYP71B15//MAP1B//ATHPR1//AT1G35420//AT1G32470//ATLFNR2//BAH1//AtHBP1//PSBR//ATBCAT-1//AT1G77090//AT2G14060//GDCH//AT2G35410//AT2G44920//ASP1//AT2G37700//SCPL8//FDH GO:0006082 organic acid metabolic process BP 2.8224645454761e-05 AtPLT6//AT5G16230//AT5G16240//EMB2247//ATPCME//BETA//MSP-1//FACT//AT5G58330//AT2353//LIL3:2//TET1//APE2//G6PD1//AT5G22820//GAD//AT5G17380//PSY//VAT1//AT5G16520//BCCP//ATDEF2//PMDH2//ATEGY2//MLS//ATCCD1//AT3G59710//AT3G59480//ACSF//AT3G56010//AT3G47650//AFT//SEP1//AT4G30620//AT4G26370//PETC//AT3G26450//HCF101//AT3G25805//PGK1//ADS3//CYP71B15//MAP1B//ATHPR1//AT1G35420//AT1G32470//ATLFNR2//BAH1//AtHBP1//PSBR//ATBCAT-1//AT1G77090//AT2G14060//GDCH//AT2G35410//AT2G44920//ASP1//AT2G37700//SCPL8//FDH GO:1901564 organonitrogen compound metabolic proces... BP 3.49039075455179e-05 ORF25//NAD4L//AtPLT6//EMB2247//MSP-1//RGLG3//TET1//APE2//G6PD1//HCF136//ENH1//GAD//AT5G17380//PSY//VAT1//IPP1//PMDH2//AT5G08050//ATCCD1//ACSF//AT3G56010//HCEF1//ATSSL4//AT3G47650//SEP1//AT4G26370//PETC//AT3G22210//AT3G26450//HCF101//NAD5//PGK1//ADS3//CYP71B15//ATHPR1//AT1G35420//NRT1.5//AT1G32470//ATLFNR2//LQY1//PSBR//ATBCAT-1//ATHM1//AT1G77090//ATTSPO//GDCH//AT2G35410//PSAP//AT2G44920//ASP1//SCPL8" GO:0015995 chlorophyll biosynthetic process BP 3.91940188805985e-05 HCF136//PSY//IPP1//PMDH2//AT5G08050//ATCCD1//ACSF//HCEF1//SEP1//HCF101//ADS3//AT2G35410//AT2G44920 GO:0044281 small molecule metabolic process BP 4.21413951437333e-05 ORF25//NAD4L//AtPLT6//AtITPK1//AT5G16230//AT5G16240//EMB2247//ATPCME//BETA//MSP-1//FACT//AT5G58330//AT2353//LIL3:2//TET1//APE2//G6PD1//AT5G22820//HCF136//ENH1//AtUGP2//GAD//AT5G17380//PSY//LRR1//VAT1//AT5G16520//BCCP//ATF2//ATDEF2//PMDH2//AT5G08050//ATEGY2//VTE5//MLS//ATCCD1//AT3G59710//AT3G59480//ACSF//AT3G56010//HCEF1//AT3G47650//AFT//SEP1//AT4G30620//AT4G26370//PETC//AT3G22210//AT3G26450//HCF101//NAD5//AT3G25805//PGK1//ADS3//CYP71B15//MAP1B//ATHPR1//AT1G35420//AT1G32470//ATLFNR2//BAH1//AtHBP1//LQY1//CYP705A13//PSBR//ATBCAT-1//ATHM1//AT1G77090//AT2G14060//GDCH//AT2G35410//PSAP//AT2G44920//ASP1//AT2G37700//SCPL8//FDH GO:0009767 photosynthetic electron transport chain BP 4.28846374387555e-05 MSP-1//AT5G08050//HCEF1//AT3G47650//SEP1//PETC//ADS3//ATHPR1//ATLFNR2//AT1G54500//PSAP GO:0006633 fatty acid biosynthetic process BP 6.31672418581126e-05 AT5G16230//AT5G16240//PSY//BCCP//PMDH2//ATCCD1//ACSF//ADS3//AT2G14060//AT2G44920//AT2G37700//SCPL8//FDH GO:0009117 nucleotide metabolic process BP 7.79965792959211e-05 ORF25//NAD4L//G6PD1//HCF136//ENH1//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//NAD5//PGK1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920//ASP1//SCPL8 GO:0006753 nucleoside phosphate metabolic process BP 8.24659923546851e-05 ORF25//NAD4L//G6PD1//HCF136//ENH1//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//NAD5//PGK1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920//ASP1//SCPL8 GO:0032787 monocarboxylic acid metabolic process BP 9.42916972901314e-05 AtPLT6//AT5G16230//AT5G16240//ATPCME//BETA//MSP-1//FACT//LIL3:2//G6PD1//AT5G22820//AT5G17380//PSY//AT5G16520//BCCP//ATDEF2//PMDH2//ATEGY2//MLS//ATCCD1//AT3G59710//AT3G59480//ACSF//AT3G56010//AT3G47650//AFT//SEP1//AT4G30620//PETC//HCF101//AT3G25805//PGK1//ADS3//CYP71B15//MAP1B//ATLFNR2//BAH1//AT1G77090//AT2G14060//GDCH//AT2G35410//AT2G44920//AT2G37700//SCPL8//FDH GO:0044802 single-organism membrane organization BP 0.00010805306477262 DHAR3//EMB2247//AtCRLK2//BETA//MSP-1//HCF136//ATTIC40//ATDEF2//PMDH2//ATEGY2//ACSF//HCEF1//AT3G47070//PETC//AtCHUP1//HCF101//PGK1//HCF107//CYP71B15//AT1G36390//ATLFNR2//ARR4//ATHM1//ALB3//AT2G35410//PSAP GO:0055086 nucleobase-containing small molecule met... BP 0.000141558143809786 ORF25//NAD4L//G6PD1//HCF136//ENH1//PMDH2//AT5G08050//ATCCD1//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//NAD5//PGK1//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//PSAP//AT2G44920//ASP1//SCPL8 GO:0009658 chloroplast organization BP 0.000144051631321093 EMB2247//APG6//MSP-1//CAA33//HCF136//ATTIC40//PMDH2//AT5G08050//ACSF//HCEF1//ATSSL4//AT3G47070//AtCHUP1//HCF101//PGK1//HCF107//ALB3//AT2G35410 GO:0061024 membrane organization BP 0.000158400805457784 DHAR3//EMB2247//AtCRLK2//BETA//MSP-1//HCF136//ATTIC40//ATDEF2//PMDH2//ATEGY2//ACSF//HCEF1//AT3G47070//PETC//AtCHUP1//HCF101//PGK1//HCF107//CYP71B15//AT1G36390//ATLFNR2//ARR4//ATHM1//ALB3//AT2G35410//PSAP GO:0019637 organophosphate metabolic process BP 0.000168069872065514 ORF25//NAD4L//AtITPK1//G6PD1//HCF136//ENH1//AtUGP2//AT5G17250//PSY//IPP1//ATDEF2//PMDH2//AT5G08050//ATEGY2//VTE5//ATCCD1//ACSF//AT3G56010//HCEF1//AT3G47650//SEP1//FKP1//PETC//AT3G22210//HCF101//NAD5//AT3G25805//PGK1//ADS3//AT1G32470//ATLFNR2//LQY1//ATHM1//AT1G77090//GDCH//AT2G35410//PSAP//AT2G44920//ASP1//SCPL8 GO:0009902 chloroplast relocation BP 0.000170844275971242 MSP-1//HCF136//ATTIC40//PMDH2//HCEF1//ATSSL4//AT3G47070//AtCHUP1//HCF101//HCF107//ALB3//AT2G35410 GO:0019750 chloroplast localization BP 0.000170844275971242 MSP-1//HCF136//ATTIC40//PMDH2//HCEF1//ATSSL4//AT3G47070//AtCHUP1//HCF101//HCF107//ALB3//AT2G35410 GO:0051644 plastid localization BP 0.000170844275971242 MSP-1//HCF136//ATTIC40//PMDH2//HCEF1//ATSSL4//AT3G47070//AtCHUP1//HCF101//HCF107//ALB3//AT2G35410 GO:0051667 establishment of plastid localization BP 0.000170844275971242 MSP-1//HCF136//ATTIC40//PMDH2//HCEF1//ATSSL4//AT3G47070//AtCHUP1//HCF101//HCF107//ALB3//AT2G35410 GO:0019288 isopentenyl diphosphate biosynthetic pro... BP 0.000179720698483274 G6PD1//PSY//ATDEF2//PMDH2//ATEGY2//ATCCD1//ACSF//AT3G56010//AT3G47650//SEP1//HCF101//AT3G25805//PGK1//ADS3//AT1G77090//AT2G35410//AT2G44920//SCPL8 GO:1901135 carbohydrate derivative metabolic proces... BP 0.000188350577337632 ORF25//NAD4L//AT5G15680//AtGNA1//AT5G58330//G6PD1//HCF136//ENH1//AT5G16680//AT5G17250//PSY//ATDEF2//PMDH2//AT5G08050//ATEGY2//ATCCD1//ACSF//AT3G56010//HCEF1//AT3G47650//SEP1//PETC//AT3G22210//HCF101//NAD5//AT3G25805//PGK1//ADS3//AT1G32470//ATLFNR2//AtHBP1//LQY1//ATHM1//AT1G77090//GDCH//AT2G35410//PSAP//AT2G44920//ASP1//SCPL8 GO:0051656 establishment of organelle localization BP 0.000212202718301001 MSP-1//HCF136//ATTIC40//PMDH2//HCEF1//ATSSL4//AT3G47070//AtCHUP1//HCF101//HCF107//ALB3//AT2G35410 GO:0006779 porphyrin-containing compound biosynthet... BP 0.000225396921205467 HCF136//PSY//IPP1//PMDH2//AT5G08050//ATCCD1//ACSF//HCEF1//SEP1//HCF101//ADS3//AT2G35410//AT2G44920 GO:0033014 tetrapyrrole biosynthetic process BP 0.000248226426399194 HCF136//PSY//IPP1//PMDH2//AT5G08050//ATCCD1//ACSF//HCEF1//SEP1//HCF101//ADS3//AT2G35410//AT2G44920 GO:0006790 sulfur compound metabolic process BP 0.000286433410604425 MSP-1//AT5G58330//TET1//APE2//LRR1//BCCP//PMDH2//ACSF//AT3G56010//FKP1//AT3G26450//PGK1//CYP71B15//ACLB-1//ATHPR1//AT1G35420//AT1G32470//ATLFNR2//AtHBP1//PSBR//AT1G77090//GDCH//SCPL8 GO:0072330 monocarboxylic acid biosynthetic process BP 0.000334983551685684 AtPLT6//AT5G16230//AT5G16240//BETA//MSP-1//PSY//BCCP//PMDH2//ATCCD1//ACSF//PETC//PGK1//ADS3//CYP71B15//ATLFNR2//BAH1//AT2G14060//GDCH//AT2G44920//AT2G37700//SCPL8//FDH GO:0042742 defense response to bacterium BP 0.000335281727584144 BETA//MSP-1//RGLG3//ATPTR3//HCEF1//AFT//PETC//MOS2//PGK1//CYP71B15//TCTP//ATLFNR2//BAH1//ATHM1//GDCH//AT2G44920 GO:0008299 isoprenoid biosynthetic process BP 0.000435852365066401 AT2353//G6PD1//HCF136//PSY//IPP1//ATDEF2//PMDH2//ATEGY2//ATCCD1//ACSF//AT3G56010//HCEF1//AT3G47650//SEP1//FKP1//HCF101//AT3G25805//PGK1//ADS3//AT1G77090//GLYI8//AT2G35410//AT2G44920//SCPL8 GO:0006996 organelle organization BP 0.000437044394777674 AT2G26500//DOT2//DHAR3//TOZ//AT5G16070//ELF9//ATRAD21.3//EMB2247//AT5G15750//EMB2782//APG6//ATSCC2//AT5G15550//MSP-1//AT5G58330//EXL3//CAA33//AT5G42150//AT5G22820//HCF136//ENH1//ATTIC40//VAT1//AT5G16470//AT5G16520//ATDEF2//PMDH2//AT5G08050//ATEGY2//ACSF//HCEF1//ATSSL4//AT3G47650//AT3G47070//SEP1//AT4G26370//PETC//AtCHUP1//HCF101//PGK1//HCF107//PSAH-1//TCTP//ATHPR1//AT1G36390//AT1G32470//ATLFNR2//AT1G44770//DUO3//LQY1//ATHM1//AT2G18410//ALB3//GDCH//AT2G35410//PSAP//PSBW GO:0009773 photosynthetic electron transport in pho... BP 0.000460792700848451 AT5G08050//HCEF1//AT3G47650//SEP1//ATHPR1//ATLFNR2//AT1G54500//PSAP GO:0016926 protein desumoylation BP 0.00054678181328634 AT5G16720//AT5G16280//ATSCC2//AT5G16300//DUO3//BGAL17 GO:0006720 isoprenoid metabolic process BP 0.000648331442013711 AT2353//G6PD1//HCF136//PSY//IPP1//ATDEF2//PMDH2//ATEGY2//ATCCD1//ACSF//AT3G56010//HCEF1//AT3G47650//SEP1//FKP1//HCF101//AT3G25805//PGK1//ADS3//AT1G77090//GLYI8//AT2G35410//AT2G44920//SCPL8 GO:0055114 oxidation-reduction process BP 0.00067899046397594 NAD4L//COX2//AT5G16990//AT5G16230//AT5G16240//CYP71B11//MSP-1//AT5G58330//AT2353//AT5G43440//G6PD1//AT5G22820//FAR1//AT5G16520//PMDH2//AT5G08050//AT3G59480//CYP94D2//HCEF1//DIN11//AT3G47650//CYP81D4//SEP1//ATGA3OX3//AT4G08780//PETC//ATLAC1//AT1G66540//NAD5//CYP71B3//CYP72A15//PIFI//ADS3//AT1G71500//ATHPR1//ATLFNR2//AT1G06650//AT1G54500//CYP705A13//PSAP//AT2G37700 GO:0015994 chlorophyll metabolic process BP 0.00077815033728191 HCF136//PSY//IPP1//PMDH2//AT5G08050//ATCCD1//ACSF//HCEF1//SEP1//HCF101//ADS3//AT2G35410//AT2G44920 GO:0044710 single-organism metabolic process BP 0.000854964411980282 ORF25//NAD4L//COX2//AT2G41610//AtPLT6//AT5G16990//AtITPK1//DHAR3//AER//AT5G16070//AtNIK1//AT5G16010//GF14//AT5G16230//AT5G16240//EMB2247//AT5G15680//ATPCME//AT5G15880//EMB2782//MUB2//AT5G15400//ATSCC2//BETA//CYP71B11//MSP-1//FACT//AT5G58720//AT5G58330//AT2353//LIL3:2//TET1//APE2//AT5G43440//AT5G42150//G6PD1//AT5G22820//HCF136//FAR1//ENH1//AtUGP2//AT5G16680//ATORC3//AT5G17250//GAD//AT5G17380//PSY//AT5G17190//LRR1//ATRAD4//VAT1//IPP1//AT5G16520//BCCP//ATF2//ATDEF2//PMDH2//AT5G08050//ATEGY2//VTE5//MLS//ATCCD1//CP12//AT3G59710//AT3G59480//ACSF//CYP94D2//AT3G56010//HCEF1//DIN11//AT3G49050//AT3G47650//CYP81D4//AFT//SEP1//ATCBL10//AT4G30620//AT4G28706//AT4G26370//ATGA3OX3//FKP1//AT4G08780//PETC//ATLAC1//AT1G66540//AtCHUP1//AT3G22210//AT3G26450//HCF101//NAD5//CYP71B3//AT3G25805//PGK1//HCF107//CYP72A15//PIFI//ADS3//CYP71B15//MAP1B//AT1G71500//ATTPS6//ATHPR1//AT1G73610//AT1G73650//AtRABA6a//AT1G35420//NRT1.5//AT1G32470//ATLFNR2//BAH1//BGAL17//AtHBP1//AT1G06650//AT1G54500//LQY1//CYP705A13//PSBR//AT1G02160//ATBCAT-1//ATHM1//AT1G77090//GLYI8//AT2G14060//ALB3//GDCH//AT2G35410//PSAP//AT2G44920//ASP1//AT2G37700//SCPL8//FDH GO:0008654 phospholipid biosynthetic process BP 0.000871383576888763 G6PD1//AT5G17250//PSY//IPP1//ATDEF2//PMDH2//ATEGY2//VTE5//ATCCD1//ACSF//AT3G56010//AT3G47650//SEP1//FKP1//HCF101//AT3G25805//PGK1//ADS3//AT1G77090//AT2G35410//AT2G44920//SCPL8 GO:0043085 positive regulation of catalytic activit... BP 0.000875118544299531 AT5G58330//ATF2//PMDH2//AT3G56010//HCEF1//HCF101//ATHM1//AT1G77090//GDCH//AT2G44920 GO:0044093 positive regulation of molecular functio... BP 0.000875118544299531 AT5G58330//ATF2//PMDH2//AT3G56010//HCEF1//HCF101//ATHM1//AT1G77090//GDCH//AT2G44920 GO:0019344 cysteine biosynthetic process BP 0.000887733455934137 MSP-1//TET1//APE2//ACSF//AT3G26450//PGK1//ATHPR1//AT1G35420//AT1G32470//PSBR//GDCH//SCPL8 GO:0051640 organelle localization BP 0.000966209284462538 MSP-1//HCF136//ATTIC40//PMDH2//HCEF1//ATSSL4//AT3G47070//AtCHUP1//HCF101//HCF107//ALB3//AT2G35410 GO:0006631 fatty acid metabolic process BP 0.000974642968124999 AT5G16230//AT5G16240//ATPCME//LIL3:2//AT5G22820//PSY//AT5G16520//BCCP//PMDH2//ATCCD1//AT3G59710//ACSF//ADS3//AT2G14060//AT2G44920//AT2G37700//SCPL8//FDH GO:0006778 porphyrin-containing compound metabolic ... BP 0.000974931862632482 HCF136//PSY//IPP1//PMDH2//AT5G08050//ATCCD1//ACSF//HCEF1//SEP1//HCF101//ADS3//ATTSPO//AT2G35410//AT2G44920 GO:0033013 tetrapyrrole metabolic process BP 0.000974931862632482 HCF136//PSY//IPP1//PMDH2//AT5G08050//ATCCD1//ACSF//HCEF1//SEP1//HCF101//ADS3//ATTSPO//AT2G35410//AT2G44920 GO:0016053 organic acid biosynthetic process BP 0.000988649232311351 AtPLT6//AT5G16230//AT5G16240//BETA//MSP-1//AT2353//TET1//APE2//PSY//VAT1//BCCP//PMDH2//ATCCD1//ACSF//AT4G26370//PETC//AT3G26450//PGK1//ADS3//CYP71B15//ATHPR1//AT1G35420//AT1G32470//ATLFNR2//BAH1//PSBR//AT2G14060//GDCH//AT2G44920//AT2G37700//SCPL8//FDH GO:0046394 carboxylic acid biosynthetic process BP 0.000988649232311351 AtPLT6//AT5G16230//AT5G16240//BETA//MSP-1//AT2353//TET1//APE2//PSY//VAT1//BCCP//PMDH2//ATCCD1//ACSF//AT4G26370//PETC//AT3G26450//PGK1//ADS3//CYP71B15//ATHPR1//AT1G35420//AT1G32470//ATLFNR2//BAH1//PSBR//AT2G14060//GDCH//AT2G44920//AT2G37700//SCPL8//FDH GO:0006534 cysteine metabolic process BP 0.00105037848256152 MSP-1//TET1//APE2//ACSF//AT3G26450//PGK1//ATHPR1//AT1G35420//AT1G32470//PSBR//GDCH//SCPL8 GO:0009070 serine family amino acid biosynthetic pr... BP 0.00114055606314282 MSP-1//TET1//APE2//ACSF//AT3G26450//PGK1//ATHPR1//AT1G35420//AT1G32470//PSBR//GDCH//SCPL8 GO:0044711 single-organism biosynthetic process BP 0.00115570104388418 ORF25//AT2G41610//AtPLT6//AtITPK1//AT5G16070//AtNIK1//AT5G16230//AT5G16240//AT5G15880//MUB2//AT5G15400//BETA//MSP-1//FACT//AT5G58330//AT2353//TET1//APE2//G6PD1//HCF136//FAR1//AtUGP2//AT5G17250//PSY//LRR1//VAT1//IPP1//BCCP//ATDEF2//PMDH2//AT5G08050//ATEGY2//VTE5//ATCCD1//CP12//AT3G59480//ACSF//AT3G56010//HCEF1//AT3G47650//AFT//SEP1//ATCBL10//AT4G26370//FKP1//PETC//AtCHUP1//AT3G22210//AT3G26450//HCF101//AT3G25805//PGK1//HCF107//ADS3//CYP71B15//ATTPS6//ATHPR1//AtRABA6a//AT1G35420//AT1G32470//ATLFNR2//BAH1//BGAL17//AtHBP1//CYP705A13//PSBR//ATHM1//AT1G77090//GLYI8//AT2G14060//ALB3//GDCH//AT2G35410//AT2G44920//ASP1//AT2G37700//SCPL8//FDH GO:0010114 response to red light BP 0.00137275969000396 HCF136//ENH1//CP12//HCEF1//AT3G47070//SEP1//ATHPR1//ARR4//PSBR GO:0016043 cellular component organization BP 0.0015697064291016 YCF5//RPS18//PSBI//AT2G26500//DOT2//DHAR3//TOZ//AT5G16070//AtNIK1//ELF9//ATRAD21.3//EMB2247//AT5G15750//AtCRLK2//EMB2782//APG6//ATSCC2//AT5G15550//BETA//MSP-1//BGAL6//AT5G58330//AT2353//EXL3//CAA33//TET1//AT5G42150//AT5G22820//HCF136//ENH1//AtUGP2//ATTIC40//VAT1//AT5G16470//AT5G16520//BCCP//ATDEF2//PMDH2//AT5G08050//ATEGY2//ACSF//HCEF1//AP3//ATSSL4//AT3G47650//AT3G47070//DRL1//SEP1//ATCBL10//MERI-5//AT4G26370//PETC//AtCHUP1//HCF101//PGK1//HCF107//CYP71B15//PSAH-1//TCTP//ATHPR1//AT1G36390//AT1G32470//ATLFNR2//AT1G44770//DUO3//ATSYP51//CCB4//LQY1//ARR4//PSBR//ATHM1//AT2G18410//OTP51//ALB3//GDCH//AT2G35410//PSAP//PSBW GO:0009069 serine family amino acid metabolic proce... BP 0.001659468182049 MSP-1//TET1//APE2//PMDH2//ACSF//AT3G26450//PGK1//ATHPR1//AT1G35420//AT1G32470//PSBR//GDCH//SCPL8 GO:0051188 cofactor biosynthetic process BP 0.0016938943768534 HCF136//PSY//IPP1//PMDH2//AT5G08050//ATCCD1//ACSF//HCEF1//SEP1//HCF101//ADS3//ACLB-1//AT2G35410//AT2G44920//SCPL8 GO:0043933 macromolecular complex subunit organizat... BP 0.00177798765014975 YCF5//RPS18//PSBI//AT2G26500//DOT2//ELF9//ATRAD21.3//ATSCC2//MSP-1//AT5G58330//EXL3//HCF136//ENH1//PMDH2//ACSF//HCEF1//AT3G47650//SEP1//PETC//AtCHUP1//HCF107//PSAH-1//TCTP//ATHPR1//AT1G32470//ATLFNR2//DUO3//CCB4//LQY1//PSBR//ATHM1//OTP51//ALB3//GDCH//PSAP//PSBW GO:0071840 cellular component organization or bioge... BP 0.00178279193033437 YCF5//RPS18//PSBI//AT2G26500//AT2G41610//DOT2//DHAR3//TOZ//AT5G16070//AtNIK1//ELF9//ATRAD21.3//AT5G16130//EMB2247//AT5G15750//AtCRLK2//EMB2782//AT5G15400//APG6//ATSCC2//AT5G15550//BETA//MSP-1//BGAL6//AT5G58330//XTH25//AT2353//EXL3//CAA33//TET1//AT5G42150//AT5G22820//HCF136//ENH1//AtUGP2//ATTIC40//VAT1//AT5G16470//AT5G16520//BCCP//ATDEF2//PMDH2//AT5G08050//ATEGY2//ACSF//HCEF1//AP3//ATSSL4//AT3G47650//AT3G47070//DRL1//SEP1//ATCBL10//MERI-5//AT4G26370//PETC//AtCHUP1//HCF101//PGK1//HCF107//CYP71B15//PSAH-1//TCTP//ATHPR1//AtRABA6a//AT1G36390//AT1G32470//ATLFNR2//AT1G44770//DUO3//BGAL17//ATSYP51//CCB4//LQY1//ARR4//PSBR//ATHM1//AT2G18410//OTP51//ALB3//GDCH//AT2G35410//PSAP//PSBW GO:0006636 unsaturated fatty acid biosynthetic proc... BP 0.00180570266451997 PSY//PMDH2//ATCCD1//ACSF//ADS3//AT2G44920//SCPL8 GO:0033559 unsaturated fatty acid metabolic process BP 0.00180570266451997 PSY//PMDH2//ATCCD1//ACSF//ADS3//AT2G44920//SCPL8 GO:0035304 regulation of protein dephosphorylation BP 0.00181571807669328 MSP-1//APE2//HCF136//PMDH2//HCEF1//AtCHUP1//HCF107//ATHPR1//LQY1//ALB3//PSAP GO:0006090 pyruvate metabolic process BP 0.00196172419152547 G6PD1//PSY//ATDEF2//PMDH2//ATEGY2//ATCCD1//ACSF//AT3G56010//AT3G47650//AFT//SEP1//HCF101//AT3G25805//PGK1//ADS3//AT1G77090//AT2G35410//AT2G44920//SCPL8 GO:0035303 regulation of dephosphorylation BP 0.0021339841334636 MSP-1//APE2//HCF136//PMDH2//HCEF1//AtCHUP1//HCF107//ATHPR1//LQY1//ALB3//PSAP GO:0044272 sulfur compound biosynthetic process BP 0.00220911819872678 MSP-1//AT5G58330//TET1//APE2//PMDH2//ACSF//AT3G26450//PGK1//CYP71B15//ACLB-1//ATHPR1//AT1G35420//AT1G32470//ATLFNR2//AtHBP1//PSBR//GDCH//SCPL8 GO:0006644 phospholipid metabolic process BP 0.00252741489689764 G6PD1//AT5G17250//PSY//IPP1//ATDEF2//PMDH2//ATEGY2//VTE5//ATCCD1//ACSF//AT3G56010//AT3G47650//SEP1//FKP1//HCF101//AT3G25805//PGK1//ADS3//AT1G77090//AT2G35410//AT2G44920//SCPL8 GO:0051649 establishment of localization in cell BP 0.00256699946592025 AT5G16880//TOZ//EMB2247//AT5G15750//AtCRLK2//AT5G15870//AT5G15880//MUB2//AT5G15550//BETA//MSP-1//AT5G42150//AT5G22820//HCF136//ATTIC40//AT5G17190//AT5G16520//PMDH2//ATSYP73//HCEF1//ATSSL4//AT3G47070//AFT//AAC3//PETC//AtCHUP1//HCF101//HCF107//CYP71B15//AT3G10780//ATLFNR2//ATSYP51//ARR4//AT2G18410//ALB3//AT2G35410//AGL20 GO:0008610 lipid biosynthetic process BP 0.00265076717362848 AT5G16230//AT5G16240//AT2353//G6PD1//HCF136//AT5G17250//PSY//LRR1//IPP1//BCCP//ATDEF2//PMDH2//ATEGY2//VTE5//ATCCD1//ACSF//AT3G56010//HCEF1//AT3G47650//SEP1//FKP1//HCF101//AT3G25805//PGK1//ADS3//CYP705A13//AT1G77090//GLYI8//AT2G14060//AT2G35410//AT2G44920//AT2G37700//SCPL8//FDH