marker gene list
| IAA 1 h |
| Red Light 4 h |
･･･up requlated genes
･･･down regulated genes| probeID | AGICode | Annotation | gene expression |
|
|---|---|---|---|---|
| 1 | 259445_at | AT1G02400 | ATGA2OX6/DTA1 (GIBBERELLIN 2-OXIDASE 6); gibberellin 2-beta-dioxygenase | 1.62 |
| 2 | 261382_at | AT1G05470 | endonuclease/exonuclease/phosphatase family protein | -0.56 |
| 3 | 262793_at | AT1G13110 | CYP71B7 (cytochrome P450, family 71, subfamily B, polypeptide 7); oxygen binding | -0.70 |
| 4 | 261766_at | AT1G15580 | IAA5 (indoleacetic acid-induced protein 5); transcription factor | 6.52 |
| 5 | 261273_at | AT1G26650 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68474.1) | -0.59 |
| 6 | 259787_at | AT1G29460 | auxin-responsive protein, putative | 2.08 |
| 7 | 259783_at | AT1G29510 | SAUR68 (SMALL AUXIN UPREGULATED 68) | 2.31 |
| 8 | 259778_at | AT1G29610 | similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT1G29570.1) | -3.88 |
| 9 | 246580_at | AT1G31770 | ABC transporter family protein | -0.80 |
| 10 | 246395_at | AT1G58170 | disease resistance-responsive protein-related / dirigent protein-related | -0.92 |
| 11 | 262285_at | AT1G68680 | similar to unknown [Populus trichocarpa] (GB:ABK93653.1) | -0.56 |
| 12 | 259854_at | AT1G72200 | zinc finger (C3HC4-type RING finger) family protein | -0.51 |
| 13 | 262166_at | AT1G74840 | myb family transcription factor | -0.97 |
| 14 | 260058_at | AT1G78100 | F-box family protein | 2.68 |
| 15 | 264144_at | AT1G79320 | ATMC6 (METACASPASE 6); caspase | -0.48 |
| 16 | 266611_at | AT2G14960 | GH3.1 | 2.20 |
| 17 | 245076_at | AT2G23170 | GH3.3; indole-3-acetic acid amido synthetase | 5.40 |
| 18 | 255788_at | AT2G33310 | IAA13 (indoleacetic acid-induced protein 13); transcription factor | 1.88 |
| 19 | 265856_at | AT2G42430 | LBD16 (ASYMMETRIC LEAVES2-LIKE18) | 1.91 |
| 20 | 259129_at | AT3G02150 | PTF1 (PLASTID TRANSCRIPTION FACTOR 1); transcription factor | -0.66 |
| 21 | 259332_at | AT3G03830 | auxin-responsive protein, putative | 1.75 |
| 22 | 259331_at | AT3G03840 | auxin-responsive protein, putative | 3.17 |
| 23 | 258225_at | AT3G15630 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G52720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46032.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71657.1) | -0.86 |
| 24 | 257766_at | AT3G23030 | IAA2 (indoleacetic acid-induced protein 2); transcription factor | 2.83 |
| 25 | 252449_at | AT3G47060 | FTSH7 (FtsH protease 7); ATP-dependent peptidase/ ATPase/ metallopeptidase | -0.53 |
| 26 | 252298_at | AT3G49060 | protein kinase family protein / U-box domain-containing protein | -0.69 |
| 27 | 252244_at | AT3G50130 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50140.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50120.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71911.1); contains InterPro domain Protein of unknown function DUF247, plant (InterPro:IPR004158); contains InterPro domain Atrophin (InterPro:IPR002951) | -1.53 |
| 28 | 252204_at | AT3G50340 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G67020.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09363.1) | 2.23 |
| 29 | 251272_at | AT3G61890 | ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 12); transcription factor | -0.86 |
| 30 | 251256_at | AT3G62300 | agenet domain-containing protein | -0.63 |
| 31 | 254926_at | AT4G11280 | ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6) | 2.20 |
| 32 | 245601_at | AT4G14240 | similar to CBS domain-containing protein-related [Arabidopsis thaliana] (TAIR:AT4G14230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71090.1); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000644); contains InterPro domain Protein of unknown function DUF21 (InterPro:IPR002550) | -0.68 |
| 33 | 245397_at | AT4G14560 | IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE); transcription factor | 2.37 |
| 34 | 253908_at | AT4G27260 | GH3.5/WES1; indole-3-acetic acid amido synthetase | 2.79 |
| 35 | 253584_at | AT4G30700 | pentatricopeptide (PPR) repeat-containing protein | -0.48 |
| 36 | 253172_at | AT4G35060 | heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related | -0.81 |
| 37 | 253103_at | AT4G36110 | auxin-responsive protein, putative | 2.59 |
| 38 | 251017_at | AT5G02760 | protein phosphatase 2C family protein / PP2C family protein | 1.75 |
| 39 | 250956_at | AT5G03210 | unknown protein | -0.70 |
| 40 | 246420_at | AT5G16870 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03010.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03010.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN83813.1); contains InterPro domain Peptidyl-tRNA hydrolase, PTH2 (InterPro:IPR002833) | -0.61 |
| 41 | 246000_at | AT5G20820 | auxin-responsive protein-related | 1.44 |
| 42 | 249306_at | AT5G41400 | zinc finger (C3HC4-type RING finger) family protein | 1.69 |
| 43 | 248801_at | AT5G47370 | HAT2; transcription factor | 3.23 |
| 44 | 248282_at | AT5G52900 | similar to unnamed protein product [Vitis vinifera] (GB:CAO49548.1) | 2.13 |
| 45 | 248164_at | AT5G54490 | PBP1 (PINOID-BINDING PROTEIN 1); calcium ion binding | 2.76 |
| 46 | 248163_at | AT5G54510 | DFL1/GH3.6 (DWARF IN LIGHT 1); indole-3-acetic acid amido synthetase | 2.04 |
| 47 | 248088_at | AT5G55070 | 2-oxoacid dehydrogenase family protein | -0.50 |
| 48 | 247925_at | AT5G57560 | TCH4 (TOUCH 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 2.30 |
| 49 | 247331_at | AT5G63530 | ATFP3 (Arabidopsis thaliana farnesylated protein 3); metal ion binding | -0.56 |
| 50 | 247247_at | AT5G64650 | ribosomal protein L17 family protein | -0.64 |