marker gene list
Mutant ga1-5
Senescing leaf
･･･up requlated genes
･･･down regulated genes
probeID AGICode Annotation gene
expression
1 261579_at AT1G01050 ATPPA1 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 1); inorganic diphosphatase/ pyrophosphatase 1.19
2 261057_at AT1G01230 ORMDL family protein 1.25
3 261055_at AT1G01300 aspartyl protease family protein 1.47
4 261049_at AT1G01430 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01080.1); similar to unknown protein Cr17 [Brassica napus] (GB:AAX51387.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) 1.08
5 261052_at AT1G01440 extra-large G-protein-related 1.11
6 259438_at AT1G01510 AN (ANGUSTIFOLIA) 1.36
7 259430_at AT1G01610 ATGPAT4/GPAT4 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase 1.32
8 261560_at AT1G01710 acyl-CoA thioesterase family protein 1.00
9 261562_at AT1G01750 actin-depolymerizing factor, putative 1.68
10 261559_at AT1G01780 LIM domain-containing protein 1.04
11 261621_at AT1G01960 EDA10 (embryo sac development arrest 10); guanyl-nucleotide exchange factor 1.15
12 261624_at AT1G02000 GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2); catalytic 1.00
13 265044_at AT1G03950 VPS2.3 -3.40
14 265194_at AT1G05010 EFE (ETHYLENE FORMING ENZYME) -1.52
15 261826_at AT1G11580 ATPMEPCRA; pectinesterase 1.05
16 262811_at AT1G11700 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17934.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) -1.57
17 261768_at AT1G15550 GA4 (GA REQUIRING 4); gibberellin 3-beta-dioxygenase 1.93
18 260656_at AT1G19380 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65650.1); similar to unknown [Vitis pseudoreticulata] (GB:ABC69762.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61173.1); contains InterPro domain Protein of unknown function DUF1195 (InterPro:IPR010608) -1.59
19 259561_at AT1G21250 WAK1 (CELL WALL-ASSOCIATED KINASE); kinase -5.07
20 245642_at AT1G25275 similar to unnamed protein product [Vitis vinifera] (GB:CAO43403.1) -1.30
21 259599_at AT1G28110 SCPL45; serine carboxypeptidase 1.05
22 259632_at AT1G56430 nicotianamine synthase, putative 1.20
23 264767_at AT1G61380 S-locus protein kinase, putative -1.50
24 262644_at AT1G62710 BETA-VPE (vacuolar processing enzyme beta); cysteine-type endopeptidase 1.17
25 261557_at AT1G63640 kinesin motor protein-related -1.68
26 260324_at AT1G63970 ISPF (Homolog of E. coli ispF (isoprenoids F)); 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -1.43
27 264636_at AT1G65490 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65486.1) -2.34
28 264469_at AT1G67100 LBD40 (LOB DOMAIN-CONTAINING PROTEIN 40) 2.34
29 264998_at AT1G67330 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27930.1); similar to unknown [Populus trichocarpa] (GB:ABK93495.1); contains InterPro domain Protein of unknown function DUF579, plant (InterPro:IPR006514) 1.01
30 259831_at AT1G69600 ATHB29/ZFHD1 (ZINC FINGER HOMEODOMAIN 1); DNA binding / transcription activator/ transcription factor 2.02
31 259752_at AT1G71040 LPR2 (LOW PHOSPHATE ROOT2); copper ion binding -1.67
32 259854_at AT1G72200 zinc finger (C3HC4-type RING finger) family protein 1.41
33 259918_at AT1G72570 DNA binding / transcription factor 3.53
34 262381_at AT1G72900 disease resistance protein (TIR-NBS class), putative -3.62
35 256332_at AT1G76890 GT2; transcription factor -1.85
36 262050_at AT1G80130 binding -2.82
37 261896_at AT1G80670 transducin family protein / WD-40 repeat family protein 1.05
38 262206_at AT2G01090 ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative 1.05
39 266353_at AT2G01520 MLP328 (MLP-LIKE PROTEIN 328) -1.50
40 266176_at AT2G02250 ATPP2-B2 (Phloem protein 2-B2); carbohydrate binding 1.25
41 266070_at AT2G18660 EXLB3 (EXPANSIN-LIKE B3 PRECURSOR) -9.28
42 245052_at AT2G26440 pectinesterase family protein -1.58
43 245038_at AT2G26560 PLP2 (PHOSPHOLIPASE A 2A); nutrient reservoir -4.76
44 265667_at AT2G27470 CCAAT-box binding transcription factor subunit HAP3-related -1.57
45 266165_at AT2G28190 CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2); copper, zinc superoxide dismutase 2.35
46 266644_at AT2G29660 zinc finger (C2H2 type) family protein 1.08
47 266669_at AT2G29750 UDP-glucoronosyl/UDP-glucosyl transferase family protein 1.39
48 267300_at AT2G30140 UDP-glucoronosyl/UDP-glucosyl transferase family protein -1.55
49 267307_at AT2G30210 LAC3 (laccase 3); copper ion binding / oxidoreductase 1.31
50 267546_at AT2G32680 disease resistance family protein -1.88
51 263841_at AT2G36870 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative 1.02
52 265959_at AT2G37240 antioxidant/ oxidoreductase -1.48
53 267035_at AT2G38400 AGT3 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 3); alanine-glyoxylate transaminase 1.02
54 266984_at AT2G39570 ACT domain-containing protein 1.09
55 267337_at AT2G39980 transferase family protein -1.60
56 267076_at AT2G41090 calmodulin-like calcium-binding protein, 22 kDa (CaBP-22) -2.96
57 266884_at AT2G44790 UCC2 (UCLACYANIN 2); copper ion binding 1.22
58 245139_at AT2G45430 DNA-binding protein-related 1.17
59 259353_at AT3G05190 aminotransferase class IV family protein 1.79
60 258939_at AT3G10020 similar to Os12g0147200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066153.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15981.1); similar to Os11g0149200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065754.1) 1.13
61 257654_at AT3G13310 DNAJ heat shock N-terminal domain-containing protein 1.28
62 257206_at AT3G16530 legume lectin family protein -2.70
63 256922_at AT3G19010 oxidoreductase, 2OG-Fe(II) oxygenase family protein -2.10
64 257143_at AT3G20110 CYP705A20 (cytochrome P450, family 705, subfamily A, polypeptide 20); oxygen binding 1.02
65 257264_at AT3G22060 receptor protein kinase-related -2.20
66 257623_at AT3G26210 CYP71B23 (cytochrome P450, family 71, subfamily B, polypeptide 23); oxygen binding -2.69
67 258277_at AT3G26830 PAD3 (PHYTOALEXIN DEFICIENT 3); oxygen binding -2.02
68 252345_at AT3G48640 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66670.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66670.1) -2.78
69 252037_at AT3G51920 CAM9 (CALMODULIN 9); calcium ion binding -1.36
70 256681_at AT3G52340 SPP2; sucrose-phosphatase -1.38
71 252010_at AT3G52740 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70571.1) 1.32
72 251887_at AT3G54170 ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37) -1.37
73 251654_at AT3G57140 SDP1-LIKE (SDP1-LIKE); GTP binding 1.38
74 255116_at AT4G08850 leucine-rich repeat family protein / protein kinase family protein -1.89
75 255070_at AT4G09020 ATISA3/ISA3 (ISOAMYLASE 3); alpha-amylase -1.89
76 255016_at AT4G10120 ATSPS4F; sucrose-phosphate synthase/ transferase, transferring glycosyl groups -1.81
77 245325_at AT4G14130 XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds 1.12
78 245293_at AT4G16660 heat shock protein 70, putative / HSP70, putative -1.66
79 245346_at AT4G17090 CT-BMY (BETA-AMYLASE 3, BETA-AMYLASE 8); beta-amylase -1.58
80 254452_at AT4G21100 DDB1B (DAMAGED DNA BINDING PROTEIN 1 B) 4.05
81 254333_at AT4G22753 SMO1-3 (STEROL 4-ALPHA METHYL OXIDASE); catalytic -1.28
82 254256_at AT4G23180 CRK10 (CYSTEINE-RICH RLK10); kinase -2.52
83 254200_at AT4G24110 similar to unnamed protein product [Vitis vinifera] (GB:CAO62924.1) 1.28
84 253648_at AT4G29940 PRHA (PATHOGENESIS RELATED HOMEODOMAIN PROTEIN A); transcription factor -4.79
85 253414_at AT4G33050 EDA39 (embryo sac development arrest 39); calmodulin binding -2.62
86 253039_at AT4G37760 SQE3 (SQUALENE EPOXIDASE 3); oxidoreductase 1.40
87 251054_at AT5G01540 lectin protein kinase, putative -1.54
88 250844_at AT5G04470 SIM (SIAMESE) 1.16
89 250214_at AT5G13870 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds 2.69
90 249756_at AT5G24313 unknown protein 1.16
91 249353_at AT5G40420 OLEO2 (OLEOSIN 2) 3.62
92 249051_at AT5G44390 FAD-binding domain-containing protein -2.50
93 248725_at AT5G47980 transferase family protein 1.22
94 248686_at AT5G48540 33 kDa secretory protein-related -1.36
95 248427_at AT5G51750 ATSBT1.3; subtilase 1.08
96 248327_at AT5G52750 heavy-metal-associated domain-containing protein -6.14
97 248330_at AT5G52810 ornithine cyclodeaminase/mu-crystallin family protein -1.54
98 248271_at AT5G53420 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27900.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27900.2); similar to Os05g0595300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056514.1); similar to hypothetical protein OsI_020507 [Oryza sativa (indica cultivar-group)] (GB:EAY99274.1); contains InterPro domain CCT (InterPro:IPR010402) -1.46
99 248276_at AT5G53550 YSL3 (YELLOW STRIPE LIKE 3); oligopeptide transporter -1.92
100 248186_at AT5G53880 similar to unknown [Populus trichocarpa] (GB:ABK92577.1) -2.01
101 248197_at AT5G54190 PORA (Protochlorophyllide reductase A); oxidoreductase/ protochlorophyllide reductase 1.74
102 247573_at AT5G61160 AACT1 (ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 1); transferase -7.47
103 247314_at AT5G64000 SAL2; 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase -2.35
104 247091_at AT5G66390 peroxidase 72 (PER72) (P72) (PRXR8) 1.22
105 247074_at AT5G66590 allergen V5/Tpx-1-related family protein 1.53
106 247030_at AT5G67210 nucleic acid binding / pancreatic ribonuclease 1.29
107 244982_at ATCG00780 encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex -2.16
108 244984_at ATCG00800 encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex -1.47