marker gene list
| FarRed Light 45min |
| Mutant nph4-1_arf19-1 |
･･･up requlated genes
･･･down regulated genes| probeID | AGICode | Annotation | gene expression |
|
|---|---|---|---|---|
| 1 | 265039_at | AT1G04000 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G44060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40594.1); contains InterPro domain Ankyrin (InterPro:IPR002110) | -0.99 |
| 2 | 260955_at | AT1G06000 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | -0.47 |
| 3 | 261081_at | AT1G07350 | transformer serine/arginine-rich ribonucleoprotein, putative | -1.08 |
| 4 | 262656_at | AT1G14200 | zinc finger (C3HC4-type RING finger) family protein | -0.72 |
| 5 | 259784_at | AT1G29450 | auxin-responsive protein, putative | 1.12 |
| 6 | 259785_at | AT1G29490 | auxin-responsive family protein | 1.63 |
| 7 | 259773_at | AT1G29500 | auxin-responsive protein, putative | 1.11 |
| 8 | 259783_at | AT1G29510 | SAUR68 (SMALL AUXIN UPREGULATED 68) | 0.84 |
| 9 | 261991_at | AT1G33700 | catalytic | 0.38 |
| 10 | 262414_at | AT1G49430 | LACS2 (LONG-CHAIN ACYL-COA SYNTHETASE 2) | -0.39 |
| 11 | 260152_at | AT1G52830 | IAA6 (indoleacetic acid-induced protein 6); transcription factor | 0.53 |
| 12 | 266529_at | AT2G16880 | pentatricopeptide (PPR) repeat-containing protein | 0.52 |
| 13 | 267336_at | AT2G19310 | similar to HSP18.2 (HEAT SHOCK PROTEIN 18.2) [Arabidopsis thaliana] (TAIR:AT5G59720.1); similar to 18.5 kDa class I heat shock protein (HSP 18.5) (GB:P05478); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978) | -0.57 |
| 14 | 266299_at | AT2G29450 | ATGSTU5 (Arabidopsis thaliana Glutathione S-transferase (class tau) 5); glutathione transferase | -0.49 |
| 15 | 267410_at | AT2G34920 | EDA18 (embryo sac development arrest 18); protein binding / zinc ion binding | 0.69 |
| 16 | 263921_at | AT2G36460 | fructose-bisphosphate aldolase, putative | -0.41 |
| 17 | 259104_at | AT3G02170 | LNG2 (LONGIFOLIA2) | 0.59 |
| 18 | 259332_at | AT3G03830 | auxin-responsive protein, putative | 0.93 |
| 19 | 259331_at | AT3G03840 | auxin-responsive protein, putative | 0.74 |
| 20 | 258830_at | AT3G07090 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46108.1); contains InterPro domain Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580) | -0.84 |
| 21 | 258979_at | AT3G09440 | heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3) | -0.70 |
| 22 | 256245_at | AT3G12580 | HSP70 (heat shock protein 70); ATP binding | -1.29 |
| 23 | 258399_at | AT3G15540 | IAA19 (indoleacetic acid-induced protein 19); transcription factor | 0.50 |
| 24 | 258406_at | AT3G17611 | rhomboid family protein / zinc finger protein-related | -0.59 |
| 25 | 257766_at | AT3G23030 | IAA2 (indoleacetic acid-induced protein 2); transcription factor | 0.46 |
| 26 | 256905_at | AT3G23990 | HSP60 (Heat shock protein 60); ATP binding / protein binding / unfolded protein binding | -0.49 |
| 27 | 258133_at | AT3G24500 | ATMBF1C/MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C); DNA binding / transcription coactivator/ transcription factor | -1.38 |
| 28 | 258137_at | AT3G24515 | UBC37 (UBIQUITIN-CONJUGATING ENZYME 37); ubiquitin-protein ligase | -0.68 |
| 29 | 257909_at | AT3G25480 | rhodanese-like domain-containing protein | -0.43 |
| 30 | 252670_at | AT3G44110 | ATJ3 (Arabidopsis thaliana DnaJ homologue 3) | -0.49 |
| 31 | 251975_at | AT3G53230 | cell division cycle protein 48, putative / CDC48, putative | -0.49 |
| 32 | 251436_at | AT3G59900 | (ARGOS); unknown protein | 0.81 |
| 33 | 255433_at | AT4G03210 | XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9); hydrolase, acting on glycosyl bonds | -0.51 |
| 34 | 254685_at | AT4G13790 | auxin-responsive protein, putative | 1.36 |
| 35 | 245427_at | AT4G17550 | transporter-related | -0.86 |
| 36 | 253322_at | AT4G33980 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42900.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42900.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42900.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64989.1) | 0.47 |
| 37 | 253228_at | AT4G34630 | similar to CM0216.450.nc [Lotus japonicus] (GB:BAF98581.1) | -0.47 |
| 38 | 246275_at | AT4G36540 | BEE2 (BR ENHANCED EXPRESSION 2); DNA binding / transcription factor | 0.48 |
| 39 | 252972_at | AT4G38840 | auxin-responsive protein, putative | 0.51 |
| 40 | 252970_at | AT4G38850 | SAUR_AC1 (SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA) | 1.34 |
| 41 | 252965_at | AT4G38860 | auxin-responsive protein, putative | 1.29 |
| 42 | 251012_at | AT5G02580 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55240.1); similar to hypothetical protein OsI_019565 [Oryza sativa (indica cultivar-group)] (GB:EAY98332.1); similar to Os05g0462000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055765.1); contains InterPro domain Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476) | 0.52 |
| 43 | 250012_x_at | AT5G18060 | auxin-responsive protein, putative | 0.79 |
| 44 | 245686_at | AT5G22060 | ATJ2 (Arabidopsis thaliana DnaJ homologue 2) | -0.46 |
| 45 | 249383_at | AT5G39860 | PRE1 (PACLOBUTRAZOL RESISTANCE1); DNA binding / transcription factor | 0.77 |
| 46 | 248801_at | AT5G47370 | HAT2; transcription factor | 0.73 |
| 47 | 248582_at | AT5G49910 | cpHSC70-2 (HEAT SHOCK PROTEIN 70-7); ATP binding / unfolded protein binding | -0.52 |
| 48 | 248282_at | AT5G52900 | similar to unnamed protein product [Vitis vinifera] (GB:CAO49548.1) | 0.72 |
| 49 | 248045_at | AT5G56030 | HSP81-2 (EARLY-RESPONSIVE TO DEHYDRATION 8); ATP binding | -1.05 |
| 50 | 247406_at | AT5G62920 | ARR6 (RESPONSE REGULATOR 6); transcription regulator/ two-component response regulator | -0.64 |