marker gene list
Red Light 45min
Shoot apex transition (before bolting)
･･･up requlated genes
･･･down regulated genes
probeID AGICode Annotation gene
expression
1 260955_at AT1G06000 UDP-glucoronosyl/UDP-glucosyl transferase family protein -0.68
2 260741_at AT1G15040 glutamine amidotransferase-related 0.58
3 255760_at AT1G16780 vacuolar-type H+-translocating inorganic pyrophosphatase, putative -0.29
4 255774_at AT1G18620 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G74160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49165.1) 0.62
5 260887_at AT1G29160 Dof-type zinc finger domain-containing protein -0.33
6 257506_at AT1G29440 auxin-responsive family protein 0.67
7 259784_at AT1G29450 auxin-responsive protein, putative 1.34
8 259787_at AT1G29460 auxin-responsive protein, putative 0.92
9 259783_at AT1G29510 SAUR68 (SMALL AUXIN UPREGULATED 68) 0.83
10 262010_at AT1G35612 transposable element gene 0.53
11 245242_at AT1G44446 CH1 (CHLOROPHYLL B BIOSYNTHESIS); chlorophyllide a oxygenase -0.38
12 260722_at AT1G48040 protein serine/threonine phosphatase -0.28
13 260152_at AT1G52830 IAA6 (indoleacetic acid-induced protein 6); transcription factor 0.61
14 265114_at AT1G62440 LRX2 (LEUCINE-RICH REPEAT/EXTENSIN 2); protein binding / structural constituent of cell wall 0.82
15 260428_at AT1G72340 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein -0.36
16 260248_at AT1G74310 ATHSP101 (HEAT SHOCK PROTEIN 101); ATP binding / ATPase 1.48
17 260745_at AT1G78370 ATGSTU20 (Arabidopsis thaliana Glutathione S-transferase (class tau) 20); glutathione transferase -0.26
18 263421_at AT2G17230 phosphate-responsive 1 family protein -0.50
19 265806_at AT2G18010 auxin-responsive family protein 0.74
20 267401_at AT2G26210 ankyrin repeat family protein -0.43
21 266271_at AT2G29440 ATGSTU6 (GLUTATHIONE S-TRANSFERASE 24); glutathione transferase 0.77
22 263906_at AT2G36250 FTSZ2-1 (FtsZ homolog 2-1); structural molecule -0.46
23 266053_at AT2G40730 HEAT repeat-containing protein -0.31
24 266811_at AT2G44850 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45380.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82628.1) -0.57
25 266596_at AT2G46150 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54200.1); similar to plant cell wall protein SlTFR88 [Lycopersicon esculentum] (GB:ABF39005.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) -0.45
26 259104_at AT3G02170 LNG2 (LONGIFOLIA2) 0.61
27 259332_at AT3G03830 auxin-responsive protein, putative 0.77
28 259331_at AT3G03840 auxin-responsive protein, putative 0.88
29 258838_at AT3G07140 GPI transamidase component Gpi16 subunit family protein -0.29
30 256245_at AT3G12580 HSP70 (heat shock protein 70); ATP binding 0.60
31 252738_at AT3G43240 ARID/BRIGHT DNA-binding domain-containing protein -0.31
32 252081_at AT3G51910 AT-HSFA7A (Arabidopsis thaliana heat shock transcription factor A7A); DNA binding / transcription factor 0.66
33 251436_at AT3G59900 (ARGOS); unknown protein 0.64
34 255433_at AT4G03210 XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9); hydrolase, acting on glycosyl bonds -0.61
35 254996_at AT4G10390 protein kinase family protein -0.29
36 254752_at AT4G13160 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G13630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43544.1); contains InterPro domain Protein of unknown function DUF593 (InterPro:IPR007656) 0.56
37 245307_at AT4G16770 oxidoreductase, 2OG-Fe(II) oxygenase family protein 0.56
38 253322_at AT4G33980 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42900.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42900.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42900.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64989.1) 0.61
39 246285_at AT4G36980 similar to unnamed protein product [Vitis vinifera] (GB:CAO71849.1); contains domain PTHR13161 (PTHR13161) 0.65
40 252970_at AT4G38850 SAUR_AC1 (SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA) 1.17
41 250993_at AT5G02280 synbindin, putative -0.34
42 250333_at AT5G11690 ATTIM17-3 (Arabidopsis thaliana translocase inner membrane subunit 17-3); P-P-bond-hydrolysis-driven protein transmembrane transporter -0.45
43 250098_at AT5G17350 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03280.1); similar to unknown [Populus trichocarpa] (GB:ABK95625.1) -0.36
44 250012_x_at AT5G18060 auxin-responsive protein, putative 0.51
45 249852_at AT5G23270 STP11 (SUGAR TRANSPORTER 11); carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter -0.27
46 248801_at AT5G47370 HAT2; transcription factor 0.84
47 248028_at AT5G55620 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G09950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39940.1) -0.40
48 247467_at AT5G62130 Per1-like protein-related -0.43
49 247048_at AT5G66560 phototropic-responsive NPH3 family protein -0.47
50 247039_at AT5G67270 ATEB1C (MICROTUBULE END BINDING PROTEIN 1); microtubule binding -0.28