marker gene list
| Blue Light 4 h |
| Salt Stress 24 h (shoot) |
･･･up requlated genes
･･･down regulated genes| probeID | AGICode | Annotation | gene expression |
|
|---|---|---|---|---|
| 1 | 260784_at | AT1G06180 | ATMYB13 (myb domain protein 13); DNA binding / transcription factor | 1.21 |
| 2 | 263207_at | AT1G10550 | XTH33 (xyloglucan:xyloglucosyl transferase 33); hydrolase, acting on glycosyl bonds | -0.69 |
| 3 | 259363_at | AT1G13270 | MAP1C (METHIONINE AMINOPEPTIDASE 1B); metalloexopeptidase | -0.62 |
| 4 | 262536_at | AT1G17100 | SOUL heme-binding family protein | 0.86 |
| 5 | 255962_at | AT1G22330 | RNA binding | -0.76 |
| 6 | 262986_at | AT1G23390 | kelch repeat-containing F-box family protein | -0.60 |
| 7 | 259773_at | AT1G29500 | auxin-responsive protein, putative | -1.06 |
| 8 | 259783_at | AT1G29510 | SAUR68 (SMALL AUXIN UPREGULATED 68) | -0.69 |
| 9 | 261804_at | AT1G30530 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | 0.78 |
| 10 | 245794_at | AT1G32170 | XTR4 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 4); hydrolase, acting on glycosyl bonds | -0.61 |
| 11 | 260727_at | AT1G48100 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | 1.07 |
| 12 | 262236_at | AT1G48330 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G17580.1); similar to unknown [Populus trichocarpa] (GB:ABK96144.1) | -0.69 |
| 13 | 262142_at | AT1G52640 | pentatricopeptide (PPR) repeat-containing protein | -0.95 |
| 14 | 260152_at | AT1G52830 | IAA6 (indoleacetic acid-induced protein 6); transcription factor | -0.90 |
| 15 | 264931_at | AT1G60590 | polygalacturonase, putative / pectinase, putative | 0.86 |
| 16 | 261958_at | AT1G64500 | glutaredoxin family protein | 0.73 |
| 17 | 263876_at | AT2G21880 | AtRABG2/AtRab7A (Arabidopsis Rab GTPase homolog G2); GTP binding | -0.62 |
| 18 | 263875_at | AT2G21970 | SEP2 (STRESS ENHANCED PROTEIN 2) | 0.78 |
| 19 | 267425_at | AT2G34810 | FAD-binding domain-containing protein | 0.92 |
| 20 | 263841_at | AT2G36870 | xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 0.69 |
| 21 | 263787_at | AT2G46420 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G61700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39750.1); contains InterPro domain Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476) | 0.68 |
| 22 | 259076_at | AT3G02140 | TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2) | 0.68 |
| 23 | 259332_at | AT3G03830 | auxin-responsive protein, putative | -0.89 |
| 24 | 257682_at | AT3G13240 | unknown protein | 0.81 |
| 25 | 258399_at | AT3G15540 | IAA19 (indoleacetic acid-induced protein 19); transcription factor | -0.60 |
| 26 | 258145_at | AT3G18200 | nodulin MtN21 family protein | -1.34 |
| 27 | 258167_at | AT3G21560 | UGT84A2; UDP-glycosyltransferase/ sinapate 1-glucosyltransferase | 1.09 |
| 28 | 258321_at | AT3G22840 | ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN); chlorophyll binding | 1.25 |
| 29 | 252661_at | AT3G44450 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G52740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70571.1) | 1.14 |
| 30 | 252123_at | AT3G51240 | F3H (TRANSPARENT TESTA 6); naringenin 3-dioxygenase | 1.35 |
| 31 | 251886_at | AT3G54260 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70127.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) | -0.73 |
| 32 | 251827_at | AT3G55120 | A11/CFI/TT5 (TRANSPARENT TESTA 5); chalcone isomerase | 0.77 |
| 33 | 255608_at | AT4G01140 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08600.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G23720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45372.1); contains InterPro domain Protein of unknown function DUF1191 (InterPro:IPR010605) | -0.58 |
| 34 | 255549_at | AT4G01950 | ATGPAT3/GPAT3 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3); acyltransferase | -0.61 |
| 35 | 254787_at | AT4G12690 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G04220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41124.1); contains InterPro domain Protein of unknown function DUF868, plant (InterPro:IPR008586) | -0.60 |
| 36 | 245346_at | AT4G17090 | CT-BMY (BETA-AMYLASE 3, BETA-AMYLASE 8); beta-amylase | 0.73 |
| 37 | 254373_at | AT4G21730 | pseudogene of N-ethylmaleimide sensitive factor (NSF) | -1.25 |
| 38 | 254065_at | AT4G25420 | GA5 (GA REQUIRING 5); gibberellin 20-oxidase/ gibberellin 3-beta-dioxygenase | -1.08 |
| 39 | 253103_at | AT4G36110 | auxin-responsive protein, putative | -0.67 |
| 40 | 252970_at | AT4G38850 | SAUR_AC1 (SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA) | -0.67 |
| 41 | 251020_at | AT5G02270 | ATNAP9 (Non-intrinsic ABC protein 9) | 1.17 |
| 42 | 250420_at | AT5G11260 | HY5 (ELONGATED HYPOCOTYL 5); DNA binding / transcription factor | 0.76 |
| 43 | 246468_at | AT5G17050 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | 1.02 |
| 44 | 249923_at | AT5G19120 | aspartic-type endopeptidase/ pepsin A | -0.62 |
| 45 | 246966_at | AT5G24850 | CRY3 (CRYPTOCHROME 3); DNA binding / DNA photolyase/ FMN binding | 0.99 |
| 46 | 249191_at | AT5G42760 | similar to unknown [Populus trichocarpa] (GB:ABK95091.1); contains InterPro domain O-methyltransferase, N-terminal (InterPro:IPR003455); contains InterPro domain Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610) | 0.82 |
| 47 | 249063_at | AT5G44110 | POP1 | 0.97 |
| 48 | 248625_at | AT5G48880 | KAT5/PKT1/PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 1, PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase | 0.90 |
| 49 | 248460_at | AT5G50915 | basic helix-loop-helix (bHLH) family protein | -0.75 |
| 50 | 247540_at | AT5G61590 | AP2 domain-containing transcription factor family protein | -0.57 |