marker gene list
Genotoxic Stress 3 h (root)
Wounding Stress3 h (root)
･･･up requlated genes
･･･down regulated genes
probeID AGICode Annotation gene
expression
1 264842_at AT1G03700 integral membrane family protein 1.68
2 264580_at AT1G05340 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32210.1) 1.44
3 260623_at AT1G08090 ATNRT2:1 (Arabidopsis thaliana high affinity nitrate transporter 2.1); nitrate transmembrane transporter -4.18
4 264795_at AT1G08680 ZIGA4 (ARF GAP-LIKE ZINC FINGER-CONTAINING PROTEIN ZIGA4); DNA binding -1.08
5 264262_at AT1G09200 histone H3 -0.84
6 264674_at AT1G09815 POLD4; delta DNA polymerase 1.46
7 259410_at AT1G13340 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G34220.2); similar to unknown [Carica papaya] (GB:ABS01355.1); contains InterPro domain Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061) -0.85
8 261031_at AT1G17360 COP1-interacting protein-related 2.12
9 261086_at AT1G17460 TRFL3 (TRF-LIKE 3); DNA binding / transcription factor 1.67
10 256012_at AT1G19250 FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1); monooxygenase 3.69
11 255814_at AT1G19900 glyoxal oxidase-related 1.59
12 262801_at AT1G21010 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G76600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66314.1) -0.81
13 259560_at AT1G21270 WAK2 (wall-associated kinase 2); protein serine/threonine kinase 2.61
14 264774_at AT1G22890 unknown protein 1.40
15 265131_at AT1G23760 JP630; polygalacturonase 1.68
16 264859_at AT1G24280 G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3); glucose-6-phosphate dehydrogenase -1.24
17 262743_at AT1G29020 calcium-binding EF hand family protein -0.81
18 256499_at AT1G36640 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G36622.1) 1.49
19 259813_at AT1G49860 ATGSTF14 (Arabidopsis thaliana Glutathione S-transferase (class phi) 14); glutathione transferase -1.20
20 246368_at AT1G51890 leucine-rich repeat protein kinase, putative 1.61
21 265048_at AT1G52050 jacalin lectin family protein 1.97
22 265049_at AT1G52060 similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT1G52070.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) 2.42
23 265050_at AT1G52070 jacalin lectin family protein 1.57
24 264940_at AT1G60470 ATGOLS4 (ARABIDOPSIS THALIANA GALACTINOL SYNTHASE 4); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups -1.07
25 256524_at AT1G66200 ATGSR2 (Arabidopsis thaliana glutamine synthase clone R2); glutamate-ammonia ligase -0.91
26 260459_at AT1G68240 transcription factor 2.45
27 262304_at AT1G70890 MLP43 (MLP-LIKE PROTEIN 43) 1.92
28 261751_at AT1G76080 ATCDSP32/CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD); thiol-disulfide exchange intermediate 1.42
29 262137_at AT1G77920 bZIP family transcription factor -0.86
30 260059_at AT1G78090 ATTPPB (TREHALOSE-6-PHOSPHATE PHOSPHATASE) -0.85
31 262940_at AT1G79520 cation efflux family protein -0.84
32 265872_at AT2G01670 ATNUDT17 (Arabidopsis thaliana Nudix hydrolase homolog 17); hydrolase -0.86
33 266141_at AT2G02120 LCR70/PDF2.1 (Low-molecular-weight cysteine-rich 70); protease inhibitor -0.88
34 263061_at AT2G18190 AAA-type ATPase family protein 2.15
35 245082_at AT2G23270 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G37290.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62855.1) 2.84
36 263800_at AT2G24600 ankyrin repeat family protein -0.90
37 245056_at AT2G26480 UDP-glucoronosyl/UDP-glucosyl transferase family protein 1.80
38 266246_at AT2G27690 CYP94C1 (cytochrome P450, family 94, subfamily C, polypeptide 1); oxygen binding -0.92
39 263443_at AT2G28630 beta-ketoacyl-CoA synthase family protein -0.93
40 266292_at AT2G29350 SAG13 (Senescence-associated gene 13); oxidoreductase -2.00
41 255872_at AT2G30360 CIPK11 (SOS3-INTERACTING PROTEIN 4); kinase 2.59
42 267567_at AT2G30770 CYP71A13 (CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 13); indoleacetaldoxime dehydratase/ oxygen binding -3.36
43 264116_at AT2G31320 poly (ADP-ribose) polymerase, putative / NAD(+) ADP-ribosyltransferase, putative / poly(ADP-ribose) synthetase, putative 2.70
44 263283_at AT2G36090 F-box family protein -0.86
45 263921_at AT2G36460 fructose-bisphosphate aldolase, putative -0.81
46 265959_at AT2G37240 antioxidant/ oxidoreductase 1.99
47 265960_at AT2G37470 histone H2B, putative -0.98
48 266191_at AT2G39040 peroxidase, putative 1.72
49 267623_at AT2G39650 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69213.1); contains InterPro domain Protein of unknown function DUF506, plant (InterPro:IPR006502) 1.53
50 260540_at AT2G43500 RWP-RK domain-containing protein -0.82
51 245137_at AT2G45460 forkhead-associated domain-containing protein / FHA domain-containing protein 2.36
52 263783_at AT2G46400 WRKY46 (WRKY DNA-binding protein 46); transcription factor -1.06
53 245151_at AT2G47550 pectinesterase family protein -0.89
54 245171_at AT2G47560 zinc finger (C3HC4-type RING finger) family protein -1.39
55 266458_at AT2G47710 universal stress protein (USP) family protein -0.78
56 266486_at AT2G47950 unknown protein -1.16
57 258476_at AT3G02400 forkhead-associated domain-containing protein / FHA domain-containing protein / AT hook motif-containing protein 1.90
58 258487_at AT3G02550 LBD41 (LOB DOMAIN-CONTAINING PROTEIN 41) -1.22
59 258878_at AT3G03170 similar to hypothetical protein [Vitis vinifera] (GB:CAN71065.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22226.1) -1.06
60 259197_at AT3G03670 peroxidase, putative 2.29
61 259224_at AT3G07800 thymidine kinase, putative 4.16
62 259211_at AT3G09020 alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein 2.16
63 258707_at AT3G09480 histone H2B, putative -0.92
64 256781_at AT3G13650 disease resistance response -0.97
65 258214_at AT3G17970 ATTOC64-III (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-III); binding / carbon-nitrogen ligase, with glutamine as amido-N-donor -0.75
66 257061_at AT3G18250 contains domain PROKAR_LIPOPROTEIN (PS51257) 1.79
67 257026_at AT3G19200 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61148.1) -0.84
68 256666_at AT3G20670 HTA13; DNA binding -0.85
69 257925_at AT3G23170 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14450.1) -1.30
70 257919_at AT3G23250 AtMYB15/AtY19/MYB15 (myb domain protein 15); DNA binding / transcription factor -0.79
71 257840_at AT3G25250 AGC2-1 (OXIDATIVE SIGNAL-INDUCIBLE1); kinase 2.18
72 257809_at AT3G27060 TSO2 (TSO MEANING 'UGLY' IN CHINESE); ribonucleoside-diphosphate reductase 2.76
73 257714_at AT3G27360 histone H3 -0.90
74 245226_at AT3G29970 germination protein-related -2.17
75 252770_at AT3G42860 zinc knuckle (CCHC-type) family protein 1.78
76 252539_at AT3G45730 unknown protein 2.99
77 252196_at AT3G50200 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50170.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59797.1); contains InterPro domain Protein of unknown function DUF247, plant (InterPro:IPR004158) -0.74
78 251400_at AT3G60420 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70569.1); contains InterPro domain Phosphoglycerate mutase (InterPro:IPR013078); contains InterPro domain PRIB5 (InterPro:IPR012398) 2.81
79 251176_at AT3G63380 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) 1.62
80 255524_at AT4G02330 ATPMEPCRB; pectinesterase -0.77
81 255500_at AT4G02390 APP (ARABIDOPSIS POLY(ADP-RIBOSE) POLYMERASE); NAD+ ADP-ribosyltransferase 3.65
82 245448_at AT4G16860 RPP4 (RECOGNITION OF PERONOSPORA PARASITICA 4) 1.92
83 254443_at AT4G21070 ATBRCA1 (BREAST CANCER SUSCEPTIBILITY1); ubiquitin-protein ligase 3.69
84 254284_at AT4G22910 signal transducer 1.84
85 254287_at AT4G22960 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G11860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63644.1); contains InterPro domain Protein of unknown function DUF544 (InterPro:IPR007518) 2.25
86 253793_at AT4G28710 XIH (Myosin-like protein XIH) -0.95
87 253733_at AT4G29170 ATMND1 2.93
88 253722_at AT4G29190 zinc finger (CCCH-type) family protein -1.10
89 253605_at AT4G30991 binding -0.89
90 253573_at AT4G31020 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G24320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22751.1); contains domain PTHR12277:SF8 (PTHR12277:SF8); contains domain PTHR12277 (PTHR12277); contains domain SSF53474 (SSF53474); contains domain G3DSA:3.40.50.1820 (G3DSA:3.40.50.1820) -1.43
91 253240_at AT4G34510 KCS2 (3-ketoacyl-CoA synthase 2); acyltransferase 4.19
92 253215_at AT4G34950 nodulin family protein -1.05
93 253157_at AT4G35740 RecQl3 (Recq-like 3); ATP binding / ATP-dependent helicase 2.41
94 253104_at AT4G36010 pathogenesis-related thaumatin family protein -0.90
95 246229_at AT4G37160 SKS15 (SKU5 Similar 15); copper ion binding 1.53
96 253101_at AT4G37430 CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2); oxygen binding -1.29
97 253051_at AT4G37490 CYC1 (CYCLIN 1); cyclin-dependent protein kinase regulator 2.46
98 252979_at AT4G38225 similar to unnamed protein product [Vitis vinifera] (GB:CAO47538.1); contains domain PTHR11014 (PTHR11014); contains domain PTHR11014:SF1 (PTHR11014:SF1) 1.61
99 251105_at AT5G01730 WAVE3 1.64
100 250835_at AT5G04560 DME (DEMETER) -0.84
101 250770_at AT5G05390 LAC12 (laccase 12); copper ion binding / oxidoreductase 1.58
102 250597_at AT5G07680 ANAC079/ANAC080/ATNAC4 (Arabidopsis NAC domain containing protein 79, Arabidopsis NAC domain containing protein 80); transcription factor -1.15
103 250426_at AT5G10510 AIL6 (AINTEGUMENTA-LIKE 6); DNA binding / transcription factor -0.76
104 250438_at AT5G10580 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31330.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79714.1); contains InterPro domain Protein of unknown function DUF599 (InterPro:IPR006747) -0.96
105 250286_at AT5G13320 PBS3 (AVRPPHB SUSCEPTIBLE 3) 2.34
106 246600_at AT5G14930 SAG101 (SENESCENCE-ASSOCIATED GENE 101); triacylglycerol lipase 2.18
107 250062_at AT5G17760 AAA-type ATPase family protein -1.15
108 250014_at AT5G17990 TRP1 (TRYPTOPHAN BIOSYNTHESIS 1); anthranilate phosphoribosyltransferase -0.80
109 246132_at AT5G20850 ATRAD51 (Arabidopsis thaliana Ras Associated with Diabetes protein 51); damaged DNA binding 3.14
110 249784_at AT5G24280 ATP binding 3.25
111 246821_at AT5G26920 calmodulin binding 1.92
112 246744_at AT5G27760 hypoxia-responsive family protein 1.38
113 249459_at AT5G39580 peroxidase, putative -2.09
114 249417_at AT5G39670 calcium-binding EF hand family protein 1.69
115 249346_at AT5G40780 LHT1 (LYSINE HISTIDINE TRANSPORTER 1); amino acid transmembrane transporter -0.81
116 249326_at AT5G40840 SYN2 (Sister chromatid cohesion 1 (SCC1) protein homolog 2) 2.93
117 249333_at AT5G40990 GLIP1 (GDSL LIPASE1); carboxylesterase -2.33
118 248738_at AT5G48020 similar to unnamed protein product [Vitis vinifera] (GB:CAO15084.1); contains domain PTHR10209 (PTHR10209); contains domain SSF51197 (SSF51197); contains domain G3DSA:2.60.120.330 (G3DSA:2.60.120.330) 2.44
119 248668_at AT5G48720 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23288.1) 3.90
120 248676_at AT5G48850 male sterility MS5 family protein -0.82
121 248607_at AT5G49480 ATCP1 (CA2+-BINDING PROTEIN 1); calcium ion binding 2.03
122 248551_at AT5G50200 WR3 (WOUND-RESPONSIVE 3); nitrate transmembrane transporter -0.93
123 248086_at AT5G55490 ATGEX1/GEX1 (GAMETE EXPRESSED PROTEIN1) 3.55
124 248055_at AT5G55830 lectin protein kinase, putative -0.99
125 248048_at AT5G56080 nicotianamine synthase, putative -1.95
126 247769_at AT5G58910 LAC16 (laccase 16); copper ion binding / oxidoreductase 2.30
127 247431_at AT5G62520 SRO5 (SIMILAR TO RCD ONE 5); NAD+ ADP-ribosyltransferase -1.57
128 247317_at AT5G64060 ANAC103 (Arabidopsis NAC domain containing protein 103); transcription factor 2.21
129 247228_at AT5G65140 trehalose-6-phosphate phosphatase, putative -1.93
130 247081_at AT5G66130 ATRAD17 (RADIATION SENSITIVE) 2.16
131 247024_at AT5G66985 unknown protein -1.31
132 247038_at AT5G67160 transferase family protein -1.47