marker gene list
| Oxidative Stress 3 h (root) |
| Wounding Stress3 h (root) |
･･･up requlated genes
･･･down regulated genes| probeID | AGICode | Annotation | gene expression |
|
|---|---|---|---|---|
| 1 | 260903_at | AT1G02460 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | 0.62 |
| 2 | 261381_at | AT1G05460 | SDE3 (SILENCING DEFECTIVE) | 0.85 |
| 3 | 261809_at | AT1G08340 | rac GTPase activating protein, putative | 0.80 |
| 4 | 264262_at | AT1G09200 | histone H3 | -0.69 |
| 5 | 261023_at | AT1G12200 | flavin-containing monooxygenase family protein / FMO family protein | -0.90 |
| 6 | 261763_at | AT1G15520 | ATPDR12/PDR12 (PLEIOTROPIC DRUG RESISTANCE 12); ATPase, coupled to transmembrane movement of substances | -0.82 |
| 7 | 262752_at | AT1G16330 | CYCB3;1 (CYCLIN B3;1); cyclin-dependent protein kinase | -0.79 |
| 8 | 261038_at | AT1G17490 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72690.1); similar to unknown [Populus trichocarpa] (GB:ABK95773.1) | 1.23 |
| 9 | 262444_at | AT1G47480 | hydrolase | 0.65 |
| 10 | 246375_at | AT1G51830 | ATP binding / kinase/ protein serine/threonine kinase | 0.67 |
| 11 | 265031_at | AT1G61590 | protein kinase, putative | 0.64 |
| 12 | 260406_at | AT1G69920 | ATGSTU12 (Arabidopsis thaliana Glutathione S-transferase (class tau) 12); glutathione transferase | -1.37 |
| 13 | 263819_x_at | AT2G10140 | transposable element gene | -0.63 |
| 14 | 267519_at | AT2G30470 | HSI2 (HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2); transcription factor/ transcription repressor | 0.84 |
| 15 | 264086_at | AT2G31190 | similar to EMB1879 (EMBRYO DEFECTIVE 1879) [Arabidopsis thaliana] (TAIR:AT5G49820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40639.1); contains InterPro domain Protein of unknown function DUF647 (InterPro:IPR006968) | -0.61 |
| 16 | 267418_at | AT2G35000 | zinc finger (C3HC4-type RING finger) family protein | 0.67 |
| 17 | 265796_at | AT2G35730 | heavy-metal-associated domain-containing protein | -0.69 |
| 18 | 263942_at | AT2G35860 | FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR) | 1.12 |
| 19 | 267101_at | AT2G41480 | peroxidase | -0.59 |
| 20 | 267367_at | AT2G44210 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67164.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) | 0.69 |
| 21 | 260529_at | AT2G47400 | CP12-1 (CP12 domain-containing protein 1) | 0.73 |
| 22 | 265769_at | AT2G48090 | unknown protein | -0.84 |
| 23 | 258606_at | AT3G02840 | immediate-early fungal elicitor family protein | -1.23 |
| 24 | 258809_at | AT3G04070 | ANAC047 (Arabidopsis NAC domain containing protein 47); transcription factor | -0.79 |
| 25 | 258510_at | AT3G06600 | unknown protein | 0.82 |
| 26 | 258542_at | AT3G07030 | pseudogene, similar to OSJNBa0042L16.13, blastp match of 56% identity and 1.3e-39 P-value to GP|21740825|emb|CAD41015.1||AL606632 OSJNBa0042L16.13 {Oryza sativa (japonica cultivar-group)} | -0.64 |
| 27 | 258545_at | AT3G07050 | GTP-binding family protein | 1.06 |
| 28 | 258209_at | AT3G14060 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45609.1) | -0.57 |
| 29 | 257061_at | AT3G18250 | contains domain PROKAR_LIPOPROTEIN (PS51257) | -0.86 |
| 30 | 257670_at | AT3G20340 | Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. | 2.15 |
| 31 | 254968_at | AT4G10420 | similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G10400.2); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G10400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101) | -1.26 |
| 32 | 254660_at | AT4G18250 | receptor serine/threonine kinase, putative | -1.20 |
| 33 | 254581_at | AT4G19440 | pentatricopeptide (PPR) repeat-containing protein | -0.89 |
| 34 | 254430_at | AT4G20820 | FAD-binding domain-containing protein | 0.85 |
| 35 | 253044_at | AT4G37290 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G23270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62855.1) | -1.18 |
| 36 | 251069_at | AT5G01930 | (1-4)-beta-mannan endohydrolase, putative | 0.95 |
| 37 | 250774_at | AT5G05450 | DEAD/DEAH box helicase, putative (RH18) | 0.74 |
| 38 | 246600_at | AT5G14930 | SAG101 (SENESCENCE-ASSOCIATED GENE 101); triacylglycerol lipase | -0.67 |
| 39 | 246498_at | AT5G16230 | acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 1.09 |
| 40 | 246476_at | AT5G16730 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62148.1); contains InterPro domain Spectrin repeat (InterPro:IPR002017) | 0.86 |
| 41 | 250059_at | AT5G17820 | peroxidase 57 (PER57) (P57) (PRXR10) | 0.69 |
| 42 | 249814_at | AT5G23840 | MD-2-related lipid recognition domain-containing protein / ML domain-containing protein | 0.72 |
| 43 | 249333_at | AT5G40990 | GLIP1 (GDSL LIPASE1); carboxylesterase | -1.45 |
| 44 | 249202_at | AT5G42580 | CYP705A12 (cytochrome P450, family 705, subfamily A, polypeptide 12); oxygen binding | -0.67 |
| 45 | 249188_at | AT5G42830 | transferase family protein | -1.03 |
| 46 | 249178_at | AT5G42890 | sterol carrier protein 2 (SCP-2) family protein | -0.58 |
| 47 | 254521_at | AT5G44820 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46707.1); contains domain PTHR10483:SF6 (PTHR10483:SF6); contains domain PTHR10483 (PTHR10483) | -0.98 |
| 48 | 248988_at | AT5G45190 | cyclin family protein | 0.77 |
| 49 | 248621_at | AT5G49350 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44880.1); contains domain PTHR10499 (PTHR10499) | -0.58 |
| 50 | 248573_at | AT5G49720 | AtGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); hydrolase, hydrolyzing O-glycosyl compounds | 0.79 |
| 51 | 248052_at | AT5G55800 | DC1 domain-containing protein | 1.76 |
| 52 | 248054_at | AT5G55820 | similar to unnamed protein product [Vitis vinifera] (GB:CAO45135.1) | -0.99 |
| 53 | 247959_at | AT5G57080 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26055.1) | -0.79 |
| 54 | 247778_at | AT5G58750 | wound-responsive protein-related | 0.89 |
| 55 | 247768_at | AT5G58900 | myb family transcription factor | 1.02 |
| 56 | 247251_at | AT5G64740 | CESA6 (CELLULOSE SYNTHASE 6); transferase, transferring glycosyl groups | 0.62 |
| 57 | 247200_at | AT5G65120 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10110.1); similar to 52O08_25 [Brassica rapa subsp. pekinensis] (GB:AAZ67571.1) | -1.02 |
| 58 | 247094_at | AT5G66280 | GMD1 (GDP-D-MANNOSE 4,6-DEHYDRATASE 1); GDP-mannose 4,6-dehydratase | 0.68 |
| 59 | 244950_at | ATMG00160 | cytochrome c oxidase subunit 2 | 0.67 |