marker gene list
Wounding Stress3 h (shoot)
Methyl Jasmonate 3 h
･･･up requlated genes
･･･down regulated genes
probeID AGICode Annotation gene
expression
1 261175_at AT1G04800 glycine-rich protein -0.63
2 264436_at AT1G10370 ATGSTU17/ERD9/GST30/GST30B (EARLY-RESPONSIVE TO DEHYDRATION 9); glutathione transferase 2.69
3 263210_at AT1G10585 transcription factor 4.54
4 265188_at AT1G23800 ALDH2B7 (Aldehyde dehydrogenase 2B7); 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) 2.64
5 259789_at AT1G29395 COR414-TM1 (cold regulated 414 thylakoid membrane 1) 2.78
6 261596_at AT1G33080 MATE efflux family protein -0.79
7 264415_at AT1G43160 RAP2.6 (related to AP2 6); DNA binding / transcription factor 8.62
8 245749_at AT1G51090 heavy-metal-associated domain-containing protein 3.51
9 262127_at AT1G52550 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15780.1) -0.58
10 259715_at AT1G60990 aminomethyltransferase -0.70
11 255856_at AT1G66940 protein kinase-related -0.92
12 256297_at AT1G69500 oxygen binding -4.33
13 260450_at AT1G72390 similar to unnamed protein product [Vitis vinifera] (GB:CAO45587.1) -1.26
14 262172_at AT1G74970 RPS9 (RIBOSOMAL PROTEIN S9); structural constituent of ribosome -0.75
15 259878_at AT1G76790 O-methyltransferase family 2 protein 2.92
16 261884_at AT1G80910 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G16020.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G16020.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42386.1); contains domain UNCHARACTERIZED (PTHR13056) -0.57
17 266743_at AT2G02990 RNS1 (RIBONUCLEASE 1); endoribonuclease 7.92
18 264787_at AT2G17840 ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7) 2.71
19 265433_at AT2G20950 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G38550.1); contains InterPro domain Phospholipase-like, arabidopsis (InterPro:IPR007942) -0.92
20 266246_at AT2G27690 CYP94C1 (cytochrome P450, family 94, subfamily C, polypeptide 1); oxygen binding 2.54
21 267545_at AT2G32690 pseudogene, glycine-rich protein -0.77
22 267411_at AT2G34930 disease resistance family protein 3.17
23 263908_at AT2G36480 zinc finger (C2H2-type) family protein -0.63
24 267147_at AT2G38240 oxidoreductase, 2OG-Fe(II) oxygenase family protein 6.78
25 266415_at AT2G38530 LTP2 (LIPID TRANSFER PROTEIN 2); lipid binding 3.56
26 263830_at AT2G40260 myb family transcription factor -1.09
27 263497_at AT2G42540 COR15A (COLD-REGULATED 15A) 5.26
28 260551_at AT2G43510 ATTI1 (ARABIDOPSIS THALIANA TRYPSIN INHIBITOR PROTEIN 1) 3.04
29 263783_at AT2G46400 WRKY46 (WRKY DNA-binding protein 46); transcription factor 2.15
30 245123_at AT2G47450 CAO (CHAOS); chromatin binding -0.88
31 266483_at AT2G47910 CRR6 (CHLORORESPIRATORY REDUCTION 6) -0.72
32 259173_at AT3G03640 GLUC (Beta-glucosidase homolog); hydrolase, hydrolyzing O-glycosyl compounds 2.32
33 258805_at AT3G04010 glycosyl hydrolase family 17 protein 2.62
34 258893_at AT3G05660 kinase/ protein binding 2.16
35 258554_at AT3G06980 DEAD/DEAH box helicase, putative -0.74
36 258708_at AT3G09580 amine oxidase family protein -0.93
37 256281_at AT3G12560 TRFL9 (TRF-LIKE 9); DNA binding -0.67
38 256245_at AT3G12580 HSP70 (heat shock protein 70); ATP binding 2.58
39 257547_at AT3G13000 transcription factor -0.60
40 257028_at AT3G19230 leucine-rich repeat family protein -0.58
41 256833_at AT3G22910 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13) 2.71
42 257171_at AT3G23760 similar to transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G14100.1); similar to unknown [Populus trichocarpa] (GB:ABK94230.1) -0.69
43 257644_at AT3G25780 AOC3 (ALLENE OXIDE CYCLASE 3) 2.63
44 256577_at AT3G28220 meprin and TRAF homology domain-containing protein / MATH domain-containing protein 2.35
45 252417_at AT3G47480 calcium-binding EF hand family protein 3.54
46 252215_at AT3G50240 KICP-02; microtubule motor -0.64
47 252102_at AT3G50970 LTI30 (LOW TEMPERATURE-INDUCED 30) 5.25
48 252114_at AT3G51450 strictosidine synthase family protein 2.61
49 246308_at AT3G51820 ATG4/CHLG/G4 (CHLOROPHYLL SYNTHASE); chlorophyll synthetase -0.57
50 251864_at AT3G54920 PMR6 (POWDERY MILDEW RESISTANT 6); lyase/ pectate lyase -0.65
51 251770_at AT3G55970 oxidoreductase, 2OG-Fe(II) oxygenase family protein 6.60
52 246294_at AT3G56910 PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5) -0.58
53 251575_at AT3G58120 bZIP transcription factor family protein -0.65
54 251513_at AT3G59220 PRN (PIRIN); calmodulin binding 4.10
55 251400_at AT3G60420 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70569.1); contains InterPro domain Phosphoglycerate mutase (InterPro:IPR013078); contains InterPro domain PRIB5 (InterPro:IPR012398) 4.46
56 251262_at AT3G62080 SNF7 family protein -0.66
57 255513_at AT4G02060 PRL (PROLIFERA); ATP binding / DNA binding / DNA-dependent ATPase -0.67
58 245329_at AT4G14365 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein 2.97
59 245584_at AT4G14940 ATAO1 (Arabidosis thaliana amine oxidase 1); copper ion binding -0.74
60 245275_at AT4G15210 ATBETA-AMY (BETA-AMYLASE); beta-amylase 3.74
61 245291_at AT4G16155 dihydrolipoamide dehydrogenase 2, plastidic / lipoamide dehydrogenase 2 (PTLPD2) -0.64
62 245422_at AT4G17470 palmitoyl protein thioesterase family protein 3.11
63 245354_at AT4G17600 LIL3:1; transcription factor -0.78
64 254243_at AT4G23210 CRK13/HIG1; kinase 2.65
65 254232_at AT4G23600 CORI3 (CORONATINE INDUCED 1, JASMONIC ACID RESPONSIVE 2); transaminase 3.76
66 254011_at AT4G26370 antitermination NusB domain-containing protein -0.73
67 253788_at AT4G28680 tyrosine decarboxylase, putative -0.69
68 253277_at AT4G34230 CAD5 (CINNAMYL ALCOHOL DEHYDROGENASE 5); cinnamyl-alcohol dehydrogenase 2.72
69 253073_at AT4G37410 CYP81F4 (cytochrome P450, family 81, subfamily F, polypeptide 4); oxygen binding 3.04
70 252989_at AT4G38420 SKS9 (SKU5 Similar 9); copper ion binding / oxidoreductase -0.61
71 250662_at AT5G07010 sulfotransferase family protein 6.61
72 250279_at AT5G13200 GRAM domain-containing protein / ABA-responsive protein-related 2.15
73 250180_at AT5G14450 GDSL-motif lipase/hydrolase family protein -0.58
74 250133_at AT5G16400 ATF2/TRXF2 (THIOREDOXIN F2); thiol-disulfide exchange intermediate -0.60
75 250061_at AT5G17710 EMB1241 (EMBRYO DEFECTIVE 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization -0.58
76 246004_at AT5G20630 GLP3 (GERMIN-LIKE PROTEIN 3); manganese ion binding / metal ion binding / nutrient reservoir -0.59
77 249836_at AT5G23420 HMGB6 (High mobility group B 6); transcription factor -0.66
78 249656_at AT5G37130 binding -0.62
79 249417_at AT5G39670 calcium-binding EF hand family protein 2.94
80 248812_at AT5G47330 palmitoyl protein thioesterase family protein 3.34
81 248686_at AT5G48540 33 kDa secretory protein-related 2.20
82 248597_at AT5G49160 MET1 (DECREASED METHYLATION 2DNA) -0.77
83 248337_at AT5G52310 COR78 (COLD REGULATED 78) 4.35
84 248332_at AT5G52640 HSP81-1 (HEAT SHOCK PROTEIN 81-1); ATP binding / unfolded protein binding 2.24
85 248118_at AT5G55050 GDSL-motif lipase/hydrolase family protein 3.18
86 247478_at AT5G62360 invertase/pectin methylesterase inhibitor family protein 3.54
87 247386_at AT5G63420 EMB2746 (EMBRYO DEFECTIVE 2746); catalytic -0.84
88 247340_at AT5G63700 zinc finger (C3HC4 type RING finger) family protein -0.59
89 247109_at AT5G65870 ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR); growth factor 2.88
90 244973_at ATCG00690 Encodes photosystem II 5 kD protein subunit PSII-T. This is a plastid-encoded gene (PsbTc) which also has a nuclear-encoded paralog (PsbTn). -0.78
91 244985_at ATCG00810 encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex -0.81
92 244938_at ATCG01120 encodes a chloroplast ribosomal protein S15, a constituent of the small subunit of the ribosomal complex -1.32