marker gene list
| P.syringae AvrRpt2 4 h (leaf) |
| K starvation (shoot) |
･･･up requlated genes
･･･down regulated genes| probeID | AGICode | Annotation | gene expression |
|
|---|---|---|---|---|
| 1 | 264600_at | AT1G04730 | AAA-type ATPase family protein | -0.83 |
| 2 | 264672_at | AT1G09750 | chloroplast nucleoid DNA-binding protein-related | -0.68 |
| 3 | 259786_at | AT1G29660 | GDSL-motif lipase/hydrolase family protein | -0.57 |
| 4 | 260704_at | AT1G32470 | glycine cleavage system H protein, mitochondrial, putative | -0.61 |
| 5 | 262144_at | AT1G52620 | pentatricopeptide (PPR) repeat-containing protein | 0.27 |
| 6 | 257466_at | AT1G62840 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24498.1); contains InterPro domain Protein of unknown function DUF1442 (InterPro:IPR009902) | 0.70 |
| 7 | 260362_at | AT1G70530 | protein kinase family protein | 0.54 |
| 8 | 260386_at | AT1G74010 | strictosidine synthase family protein | 1.11 |
| 9 | 261394_at | AT1G79680 | wall-associated kinase, putative | 1.17 |
| 10 | 265713_at | AT2G03530 | UPS2 (UREIDE PERMEASE 2) | 0.27 |
| 11 | 265288_at | AT2G20270 | glutaredoxin family protein | -0.41 |
| 12 | 265673_at | AT2G32090 | lactoylglutathione lyase family protein / glyoxalase I family protein | -0.50 |
| 13 | 267057_at | AT2G32500 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63710.1); contains InterPro domain Dimeric alpha-beta barrel (InterPro:IPR011008); contains InterPro domain Stress responsive alpha-beta barrel (InterPro:IPR013097) | -0.52 |
| 14 | 267460_at | AT2G33810 | SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3); transcription factor | -0.84 |
| 15 | 263946_at | AT2G36000 | mitochondrial transcription termination factor-related / mTERF-related | -0.44 |
| 16 | 266402_at | AT2G38780 | binding | -0.52 |
| 17 | 267083_at | AT2G41100 | TCH3 (TOUCH 3) | 0.33 |
| 18 | 260548_at | AT2G43360 | BIO2 (BIOTIN AUXOTROPH 2); biotin synthase | -0.42 |
| 19 | 266868_at | AT2G44630 | kelch repeat-containing F-box family protein | -0.45 |
| 20 | 266596_at | AT2G46150 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54200.1); similar to plant cell wall protein SlTFR88 [Lycopersicon esculentum] (GB:ABF39005.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) | 0.73 |
| 21 | 258472_at | AT3G06080 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71110.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) | 0.27 |
| 22 | 256402_at | AT3G06130 | heavy-metal-associated domain-containing protein | -0.41 |
| 23 | 258511_at | AT3G06590 | transcription factor | -0.61 |
| 24 | 256797_at | AT3G18600 | DEAD/DEAH box helicase, putative | 0.38 |
| 25 | 258003_at | AT3G29030 | ATEXPA5 (ARABIDOPSIS THALIANA EXPANSIN A5) | -0.74 |
| 26 | 246331_at | AT3G44820 | phototropic-responsive NPH3 family protein | 0.35 |
| 27 | 252234_at | AT3G49780 | ATPSK4 (PHYTOSULFOKINE 4 PRECURSOR); growth factor | 0.83 |
| 28 | 251982_at | AT3G53190 | pectate lyase family protein | -0.58 |
| 29 | 251312_at | AT3G61120 | AGL13 (AGAMOUS-LIKE 13); DNA binding / transcription factor | 0.51 |
| 30 | 245398_at | AT4G14900 | hydroxyproline-rich glycoprotein family protein | 0.33 |
| 31 | 245558_at | AT4G15430 | similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G04340.1); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G04340.3); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT3G21620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24038.1); similar to CM0545.360.nc [Lotus japonicus] (GB:BAF98597.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69661.1); contains InterPro domain Protein of unknown function DUF221; (InterPro:IPR003864) | -0.62 |
| 32 | 245413_at | AT4G17300 | NS1 (OVULE ABORTION 8) | -0.46 |
| 33 | 254520_at | AT4G19960 | potassium ion transmembrane transporter | 0.28 |
| 34 | 254475_at | AT4G20440 | SMB | -0.60 |
| 35 | 254243_at | AT4G23210 | CRK13/HIG1; kinase | 1.72 |
| 36 | 253526_at | AT4G31420 | zinc finger (C2H2 type) family protein | 0.27 |
| 37 | 246238_at | AT4G36670 | mannitol transporter, putative | 0.89 |
| 38 | 253038_at | AT4G37790 | HAT22 (homeobox-leucine zipper protein 22); transcription factor | 0.27 |
| 39 | 245701_at | AT5G04140 | GLS1/GLU1/GLUS (FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1); glutamate synthase (ferredoxin) | -0.42 |
| 40 | 250764_at | AT5G05960 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | -0.45 |
| 41 | 250734_at | AT5G06270 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15841.1) | -0.78 |
| 42 | 250726_at | AT5G06410 | DNAJ heat shock N-terminal domain-containing protein | -0.47 |
| 43 | 250580_at | AT5G07440 | GDH2 (GLUTAMATE DEHYDROGENASE 2); oxidoreductase | 0.52 |
| 44 | 250546_at | AT5G08180 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.40 |
| 45 | 246487_at | AT5G16030 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02500.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96956.1) | -0.89 |
| 46 | 246099_at | AT5G20230 | ATBCB (ARABIDOPSIS BLUE-COPPER-BINDING PROTEIN); copper ion binding | 1.22 |
| 47 | 249786_at | AT5G24310 | ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3) | 0.78 |
| 48 | 249164_at | AT5G42820 | ATU2AF35B; RNA binding | 0.26 |
| 49 | 247690_at | AT5G59800 | MBD7 (METHYL-CPG-BINDING DOMAIN 7); DNA binding | -0.52 |
| 50 | 247054_at | AT5G66730 | zinc finger (C2H2 type) family protein | 0.38 |