marker gene list
DC3000 hrcC 2 h (leaf)
Methyl Jasmonate 1 h
･･･up requlated genes
･･･down regulated genes
probeID AGICode Annotation gene
expression
1 261622_at AT1G01970 pentatricopeptide (PPR) repeat-containing protein -0.75
2 264574_at AT1G05300 ZIP5 (ZINC TRANSPORTER 5 PRECURSOR); cation transmembrane transporter 2.17
3 261420_at AT1G07720 beta-ketoacyl-CoA synthase family protein -1.12
4 261824_at AT1G11430 plastid developmental protein DAG, putative -0.71
5 261198_at AT1G12940 ATNRT2.5 (NITRATE TRANSPORTER2.5); nitrate transmembrane transporter 1.89
6 262826_at AT1G13080 CYP71B2 (CYTOCHROME P450 71B2); oxygen binding 1.47
7 261474_at AT1G14540 anionic peroxidase, putative 2.07
8 261836_at AT1G16090 WAKL7 (WALL ASSOCIATED KINASE-LIKE 7) 1.62
9 261449_at AT1G21120 O-methyltransferase, putative 1.59
10 264202_at AT1G22810 AP2 domain-containing transcription factor, putative -1.81
11 261021_at AT1G26380 FAD-binding domain-containing protein 3.72
12 261005_at AT1G26420 FAD-binding domain-containing protein 3.59
13 260897_at AT1G29330 ERD2 (ER lumen protein retaining receptor 2); receptor -0.87
14 263228_at AT1G30700 FAD-binding domain-containing protein 4.42
15 263696_at AT1G31230 AK-HSDH/AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I); aspartate kinase/ homoserine dehydrogenase -1.18
16 256466_at AT1G32580 plastid developmental protein DAG, putative -0.75
17 245832_at AT1G48850 EMB1144 (EMBRYO DEFECTIVE 1144); chorismate synthase 1.43
18 262399_at AT1G49500 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19030.1) -0.81
19 245743_at AT1G51080 similar to unnamed protein product [Vitis vinifera] (GB:CAO41687.1) -0.90
20 246368_at AT1G51890 leucine-rich repeat protein kinase, putative 2.73
21 246370_at AT1G51920 unknown protein 1.98
22 263679_at AT1G59990 DEAD/DEAH box helicase, putative (RH22) -0.85
23 264757_at AT1G61360 S-locus lectin protein kinase family protein 1.87
24 262324_at AT1G64170 ATCHX16 (CATION/H+ EXCHANGER 16); monovalent cation:proton antiporter 1.94
25 262930_at AT1G65690 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related 1.93
26 260005_at AT1G67920 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G24600.1) 1.62
27 262232_at AT1G68600 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G25480.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G17470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42118.1); contains InterPro domain Protein of unknown function UPF0005 (InterPro:IPR006214) -0.98
28 256300_at AT1G69490 NAP (NAC-LIKE, ACTIVATED BY AP3/PI); transcription factor 1.40
29 260362_at AT1G70530 protein kinase family protein 1.70
30 260205_at AT1G70700 JAZ9/TIFY7 (JASMONATE-ZIM-DOMAIN PROTEIN 9) -0.69
31 259942_at AT1G71260 ATWHY2 (A. THALIANA WHIRLY 2); DNA binding -1.15
32 262366_at AT1G72890 disease resistance protein (TIR-NBS class), putative -1.28
33 260235_at AT1G74560 NRP1 (NAP1-RELATED PROTEIN 1); DNA binding / chromatin binding / histone binding -0.76
34 259879_at AT1G76650 CML38; calcium ion binding -0.90
35 264960_at AT1G76930 ATEXT4 (EXTENSIN 4) 2.97
36 262133_at AT1G78000 SULTR1;2 (SULFATE TRANSPORTER 1;2); sulfate transmembrane transporter 1.63
37 260745_at AT1G78370 ATGSTU20 (Arabidopsis thaliana Glutathione S-transferase (class tau) 20); glutathione transferase -0.78
38 264616_at AT2G17740 DC1 domain-containing protein 3.30
39 266072_at AT2G18700 ATTPS11 (Arabidopsis thaliana trehalose phosphatase/synthase 11); transferase, transferring glycosyl groups -0.85
40 267436_at AT2G19190 FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1); kinase 3.30
41 265596_at AT2G20020 Identical to CRS2-associated factor 1, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9SL79;GB:Q94AQ2); similar to ATCAF2/CAF2 (ARABIDOPSIS THALIANA HOMOLOG OF MAIZE CAF2) [Arabidopsis thaliana] (TAIR:AT1G23400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65472.1); contains InterPro domain CRS1/YhbY (InterPro:IPR001890) -0.81
42 265306_at AT2G20320 DENN (AEX-3) domain-containing protein 1.48
43 266801_at AT2G22870 EMB2001 (EMBRYO DEFECTIVE 2001); GTP binding -1.45
44 263411_at AT2G28710 zinc finger (C2H2 type) family protein 1.90
45 266956_at AT2G34510 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29980.1); similar to unknown [Populus trichocarpa] (GB:ABK95079.1); contains InterPro domain Protein of unknown function DUF642 (InterPro:IPR006946); contains InterPro domain Galactose-binding like (InterPro:IPR008979) -0.71
46 263948_at AT2G35980 YLS9 (YELLOW-LEAF-SPECIFIC GENE 9) 2.29
47 263904_at AT2G36380 ATPDR6/PDR6 (PLEIOTROPIC DRUG RESISTANCE 6); ATPase, coupled to transmembrane movement of substances -0.97
48 263845_at AT2G37040 PAL1 (PHE AMMONIA LYASE 1); phenylalanine ammonia-lyase 1.50
49 267017_at AT2G39140 pseudouridine synthase family protein -1.49
50 266975_at AT2G39380 ATEXO70H2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H2); protein binding 2.01
51 266967_at AT2G39530 integral membrane protein, putative 3.33
52 267361_at AT2G39920 acid phosphatase class B family protein -0.81
53 263378_at AT2G40180 ATHPP2C5; protein serine/threonine phosphatase 2.88
54 266395_at AT2G43100 aconitase C-terminal domain-containing protein -1.13
55 267384_at AT2G44370 DC1 domain-containing protein 3.30
56 267385_at AT2G44380 DC1 domain-containing protein 2.23
57 266820_at AT2G44940 AP2 domain-containing transcription factor TINY, putative -0.84
58 266581_at AT2G46140 late embryogenesis abundant protein, putative / LEA protein, putative 1.44
59 258483_at AT3G02570 MEE31 (maternal effect embryo arrest 31); mannose-6-phosphate isomerase -0.71
60 258984_at AT3G08970 DNAJ heat shock N-terminal domain-containing protein 2.07
61 259033_at AT3G09410 pectinacetylesterase family protein 1.52
62 258752_at AT3G09520 ATEXO70H4 (exocyst subunit EXO70 family protein H4); protein binding 3.76
63 257193_at AT3G13160 pentatricopeptide (PPR) repeat-containing protein -0.83
64 258252_at AT3G15720 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein -1.14
65 257756_at AT3G18680 aspartate/glutamate/uridylate kinase family protein -0.72
66 258025_at AT3G19480 D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative -0.73
67 257044_at AT3G19720 ARC5 (ACCUMULATION AND REPLICATION OF CHLOROPLAST 5); GTP binding / GTPase -1.03
68 256861_at AT3G23920 BAM1/BMY7/TR-BAMY (BETA-AMYLASE 1); beta-amylase -0.83
69 252098_at AT3G51330 aspartyl protease family protein 1.71
70 251832_at AT3G55150 ATEXO70H1 (exocyst subunit EXO70 family protein H1); protein binding 2.86
71 251834_at AT3G55170 60S ribosomal protein L35 (RPL35C) -0.97
72 251804_at AT3G55430 glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative -0.75
73 251676_at AT3G57320 similar to hypothetical protein [Vitis vinifera] (GB:CAN80638.1) -0.81
74 251479_at AT3G59700 ATHLECRK (ARABIDOPSIS THALIANA LECTIN-RECEPTOR KINASE); kinase 1.45
75 255595_at AT4G01700 chitinase, putative 2.27
76 254982_at AT4G10470 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G33050.2) -0.72
77 254869_at AT4G11890 protein kinase family protein 2.09
78 254687_at AT4G13770 CYP83A1 (CYTOCHROME P450 83A1); oxygen binding -0.96
79 245504_at AT4G15660 glutaredoxin family protein -0.92
80 245494_at AT4G16390 chloroplastic RNA-binding protein P67, putative -0.70
81 254697_at AT4G17970 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G46600.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G46610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63429.1); contains InterPro domain Protein of unknown function UPF0005 (InterPro:IPR006214) -1.17
82 254660_at AT4G18250 receptor serine/threonine kinase, putative 1.69
83 254639_at AT4G18750 pentatricopeptide (PPR) repeat-containing protein -0.91
84 254543_at AT4G19810 glycosyl hydrolase family 18 protein 1.78
85 254502_at AT4G20130 PTAC14 (PLASTID TRANSCRIPTIONALLY ACTIVE14) -0.82
86 254093_at AT4G25110 ATMC2 (METACASPASE 2); caspase 1.61
87 254060_at AT4G25350 SHB1 (SHORT HYPOCOTYL UNDER BLUE1) 1.65
88 253999_at AT4G26200 ACS7 (1-Amino-cyclopropane-1-carboxylate synthase 7); 1-aminocyclopropane-1-carboxylate synthase 1.67
89 253609_at AT4G30190 AHA2 (Arabidopsis H(+)-ATPase 2); ATPase 1.49
90 253638_at AT4G30470 cinnamoyl-CoA reductase-related -0.87
91 253522_at AT4G31290 ChaC-like family protein -0.83
92 253293_at AT4G33905 peroxisomal membrane protein 22 kDa, putative -1.14
93 253088_at AT4G36220 FAH1 (FERULATE-5-HYDROXYLASE 1); ferulate 5-hydroxylase 1.43
94 252939_at AT4G39230 isoflavone reductase, putative 1.91
95 252908_at AT4G39670 glycolipid binding / glycolipid transporter 1.42
96 251097_at AT5G01560 lectin protein kinase, putative 1.46
97 251068_at AT5G01920 STN8 (state transition 8); kinase -0.70
98 250910_at AT5G03720 AT-HSFA3 (Arabidopsis thaliana heat shock transcription factor A3); DNA binding / transcription factor -0.81
99 250445_at AT5G10760 aspartyl protease family protein -0.91
100 245209_at AT5G12340 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G28190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16848.1) -1.23
101 245854_at AT5G13490 AAC2 (ADP/ATP CARRIER 2); ATP:ADP antiporter/ binding 1.45
102 246492_at AT5G16140 peptidyl-tRNA hydrolase family protein -0.72
103 246184_at AT5G20950 glycosyl hydrolase family 3 protein 1.43
104 249866_at AT5G23010 MAM1 (2-isopropylmalate synthase 3); 2-isopropylmalate synthase -0.80
105 249867_at AT5G23020 IMS2/MAM-L/MAM3 (METHYLTHIOALKYMALATE SYNTHASE-LIKE); 2-isopropylmalate synthase/ methylthioalkylmalate synthase -1.46
106 249770_at AT5G24110 WRKY30 (WRKY DNA-binding protein 30); transcription factor 3.73
107 246821_at AT5G26920 calmodulin binding 1.58
108 249727_at AT5G35490 unknown protein -0.78
109 249354_at AT5G40480 EMB3012 (EMBRYO DEFECTIVE 3012) -0.89
110 249188_at AT5G42830 transferase family protein 1.89
111 249045_at AT5G44380 FAD-binding domain-containing protein 4.07
112 248984_at AT5G45140 NRPC2 (nuclear RNA polymerase C 2); DNA binding / DNA-directed RNA polymerase -0.80
113 248854_at AT5G46580 pentatricopeptide (PPR) repeat-containing protein -1.10
114 248793_at AT5G47240 ATNUDT8 (Arabidopsis thaliana Nudix hydrolase homolog 8); hydrolase -0.70
115 248703_at AT5G48430 aspartic-type endopeptidase/ pepsin A 3.98
116 248502_at AT5G50450 zinc finger (MYND type) family protein -0.80
117 248298_at AT5G53110 similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G46495.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79324.1) 1.88
118 248001_at AT5G55990 CBL2 (calcineurin B-like protein 2); calcium ion binding -0.75
119 247949_at AT5G57220 CYP81F2 (cytochrome P450, family 81, subfamily F, polypeptide 2); oxygen binding 2.28
120 247406_at AT5G62920 ARR6 (RESPONSE REGULATOR 6); transcription regulator/ two-component response regulator -3.62
121 247327_at AT5G64120 peroxidase, putative 1.81
122 247215_at AT5G64905 PROPEP3 (Elicitor peptide 3 precursor) 1.62
123 246993_at AT5G67450 AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding 3.43