marker gene list
Red Light 1h
Dark 4 h pls UV-AB 5min
･･･up requlated genes
･･･down regulated genes
probeID AGICode Annotation gene
expression
1 259432_at AT1G01520 myb family transcription factor 3.13
2 260955_at AT1G06000 UDP-glucoronosyl/UDP-glucosyl transferase family protein 2.99
3 260956_at AT1G06040 STO (SALT TOLERANCE); transcription factor/ zinc ion binding 1.56
4 260957_at AT1G06080 ADS1 (DELTA 9 DESATURASE 1); oxidoreductase -0.91
5 256049_at AT1G07010 calcineurin-like phosphoesterase family protein 1.96
6 264512_at AT1G09575 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G57610.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G57610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21275.1); contains InterPro domain Protein of unknown function DUF607 (InterPro:IPR006769) -0.88
7 261205_at AT1G12790 similar to unnamed protein product [Vitis vinifera] (GB:CAO44590.1); contains InterPro domain RuvA domain 2-like (InterPro:IPR010994) -1.05
8 259364_at AT1G13260 RAV1 (Related to ABI3/VP1 1); DNA binding / transcription factor -0.91
9 262850_at AT1G14920 GAI (GA INSENSITIVE); transcription factor -0.94
10 260744_at AT1G15010 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42242.1) -0.99
11 262590_at AT1G15100 RHA2A (RING-H2 finger A2A); protein binding / zinc ion binding 1.59
12 256114_at AT1G16850 unknown protein -0.96
13 261663_at AT1G18330 EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1); DNA binding / transcription factor 1.65
14 261431_at AT1G18710 AtMYB47 (myb domain protein 47); DNA binding / transcription factor 1.61
15 255950_at AT1G22110 structural constituent of ribosome -0.92
16 261263_at AT1G26790 Dof-type zinc finger domain-containing protein 1.71
17 259787_at AT1G29460 auxin-responsive protein, putative -0.87
18 261700_at AT1G32690 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G35200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63850.1) 1.63
19 264415_at AT1G43160 RAP2.6 (related to AP2 6); DNA binding / transcription factor 2.63
20 259460_at AT1G44000 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G11911.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81476.1) 1.56
21 260727_at AT1G48100 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein 2.83
22 246371_at AT1G51940 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein -1.31
23 263738_at AT1G60060 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53900.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40921.1); contains domain PTHR13902:SF3 (PTHR13902:SF3); contains domain PTHR13902 (PTHR13902) -1.28
24 264271_at AT1G60270 pseudogene, glycosyl hydrolase family 1, contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) (Glycine max); blastp match of 57% identity and 2.8e-127 P-value to GP|12746303|gb|AAK07429.1|AF321287_1|AF321287 beta-glucosidase {Musa acuminata} 1.67
25 261958_at AT1G64500 glutaredoxin family protein 2.94
26 259996_at AT1G67910 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G24577.1); similar to unknown [Populus trichocarpa] (GB:ABK93048.1) -1.15
27 259645_at AT1G69010 BIM2 (BES1-INTERACTING MYC-LIKE PROTEIN 2); DNA binding / transcription factor -0.94
28 260371_at AT1G69690 TCP family transcription factor, putative -0.86
29 264341_at AT1G70270 unknown protein -0.95
30 260167_at AT1G71970 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22680.1); similar to unknown [Populus trichocarpa] (GB:ABK94498.1) -0.96
31 259848_at AT1G72180 leucine-rich repeat transmembrane protein kinase, putative -1.00
32 245734_at AT1G73480 hydrolase, alpha/beta fold family protein 1.90
33 260070_at AT1G73830 BEE3 (BR ENHANCED EXPRESSION 3); DNA binding / transcription factor -1.17
34 260248_at AT1G74310 ATHSP101 (HEAT SHOCK PROTEIN 101); ATP binding / ATPase 1.94
35 259927_at AT1G75100 JAC1 (J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1); heat shock protein binding 1.74
36 261109_at AT1G75450 CKX5 (CYTOKININ OXIDASE 5); cytokinin dehydrogenase -1.18
37 261751_at AT1G76080 ATCDSP32/CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD); thiol-disulfide exchange intermediate 1.77
38 262196_at AT1G77870 MUB5 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 5 PRECURSOR) -1.21
39 260058_at AT1G78100 F-box family protein 1.59
40 263122_at AT1G78510 SPS1 (SOLANESYL DIPHOSPHATE SYNTHASE 1); dimethylallyltranstransferase/ trans-octaprenyltranstransferase 1.99
41 265863_at AT2G01770 VIT1 (VACUOLAR IRON TRANSPORTER 1); iron ion transmembrane transporter -1.04
42 266173_at AT2G02410 similar to unnamed protein product [Vitis vinifera] (GB:CAO46936.1); contains InterPro domain Protein of unknown function DUF901 (InterPro:IPR010298) 1.72
43 266745_at AT2G02950 PKS1 (PHYTOCHROME KINASE SUBSTRATE 1) 2.04
44 265342_at AT2G18300 basic helix-loop-helix (bHLH) family protein -1.29
45 265443_at AT2G20750 ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1) -1.02
46 263739_at AT2G21320 zinc finger (B-box type) family protein 5.86
47 263894_at AT2G21910 CYP96A5 (cytochrome P450, family 96, subfamily A, polypeptide 5); oxygen binding -1.19
48 245076_at AT2G23170 GH3.3; indole-3-acetic acid amido synthetase -1.12
49 263796_at AT2G24540 AFR (ATTENUATED FAR-RED RESPONSE) 1.62
50 266139_at AT2G28085 auxin-responsive family protein -1.52
51 265276_at AT2G28400 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21845.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) -1.49
52 264057_at AT2G28550 RAP2.7/TOE1 (TARGET OF EAT1 1); DNA binding / transcription factor 1.74
53 266672_at AT2G29650 inorganic phosphate transporter, putative 1.68
54 266832_at AT2G30040 MAPKKK14 (Mitogen-activated protein kinase kinase kinase 14); kinase 2.53
55 267516_at AT2G30520 RPT2 (ROOT PHOTOTROPISM 2); protein binding 3.17
56 267517_at AT2G30520 RPT2 (ROOT PHOTOTROPISM 2); protein binding 3.12
57 263252_at AT2G31380 STH (salt tolerance homologue); transcription factor/ zinc ion binding 2.91
58 265672_at AT2G31980 cysteine proteinase inhibitor-related -0.92
59 256712_at AT2G34020 calcium ion binding -0.97
60 266097_at AT2G37970 SOUL-1; binding 1.78
61 267010_at AT2G39250 SNZ (SCHNARCHZAPFEN); DNA binding / transcription factor 2.90
62 267364_at AT2G40080 ELF4 (EARLY FLOWERING 4) 2.54
63 266364_at AT2G41230 unknown protein -0.97
64 266363_at AT2G41250 haloacid dehalogenase-like hydrolase family protein 1.58
65 263981_at AT2G42870 HLH1/PAR1 (PHY RAPIDLY REGULATED 1); transcription regulator -1.97
66 266873_at AT2G44740 CYCP4;1 (cyclin p4;1); cyclin-dependent protein kinase -1.10
67 266125_at AT2G45050 zinc finger (GATA type) family protein -0.88
68 263779_at AT2G46340 SPA1 (SUPPRESSOR OF PHYA-105 1); signal transducer 3.04
69 263787_at AT2G46420 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G61700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39750.1); contains InterPro domain Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476) 1.77
70 266719_at AT2G46830 CCA1 (CIRCADIAN CLOCK ASSOCIATED 1); transcription factor 1.98
71 258497_at AT3G02380 COL2 (CONSTANS-LIKE 2); transcription factor/ zinc ion binding 2.45
72 258609_at AT3G02910 Identical to UPF0131 protein At3g02910 [Arabidopsis Thaliana] (GB:Q9M8T3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G46720.1); similar to Os03g0854000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051934.1); similar to unknown [Picea sitchensis] (GB:ABK22133.1); contains InterPro domain Butirosin biosynthesis, BtrG-like (InterPro:IPR013024); contains InterPro domain Protein of unknown function UPF0131 (InterPro:IPR005347) 3.17
73 258742_at AT3G05800 transcription factor 2.58
74 259209_at AT3G09160 RNA recognition motif (RRM)-containing protein -1.20
75 256266_at AT3G12320 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75675.1) 2.35
76 256245_at AT3G12580 HSP70 (heat shock protein 70); ATP binding 1.57
77 258399_at AT3G15540 IAA19 (indoleacetic acid-induced protein 19); transcription factor -1.66
78 257650_at AT3G16800 protein phosphatase 2C, putative / PP2C, putative 1.60
79 257932_at AT3G17040 HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107); binding 1.78
80 258349_at AT3G17609 HYH (HY5-HOMOLOG); DNA binding / transcription factor 3.50
81 258167_at AT3G21560 UGT84A2; UDP-glycosyltransferase/ sinapate 1-glucosyltransferase 1.93
82 258181_at AT3G21670 nitrate transporter (NTP3) 2.17
83 257262_at AT3G21890 zinc finger (B-box type) family protein 3.29
84 258325_at AT3G22830 AT-HSFA6B (Arabidopsis thaliana heat shock transcription factor A6B); DNA binding / transcription factor 1.59
85 258321_at AT3G22840 ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN); chlorophyll binding 3.49
86 257173_at AT3G23810 SAHH2 (S-ADENOSYL-L-HOMOCYSTEINE (SAH) HYDROLASE 2); adenosylhomocysteinase 1.71
87 256743_at AT3G29370 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39240.1) -1.28
88 252429_at AT3G47500 CDF3 (CYCLING DOF FACTOR 3); DNA binding / protein binding / transcription factor 2.01
89 252123_at AT3G51240 F3H (TRANSPARENT TESTA 6); naringenin 3-dioxygenase 3.62
90 251811_at AT3G54990 SMZ (SCHLAFMUTZE); DNA binding / transcription factor 1.57
91 251727_at AT3G56290 similar to hypothetical protein [Vitis vinifera] (GB:CAN75527.1) 1.79
92 251601_at AT3G57800 basic helix-loop-helix (bHLH) family protein -1.25
93 251584_at AT3G58620 TTL4 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 4); binding -0.93
94 251519_at AT3G59400 GUN4 (Genomes uncoupled 4) 1.58
95 251374_at AT3G60390 HAT3 (homeobox-leucine zipper protein 3); transcription factor -2.57
96 251195_at AT3G62930 glutaredoxin family protein -1.05
97 255568_at AT4G01250 WRKY22 (WRKY DNA-binding protein 22); transcription factor -1.34
98 255577_at AT4G01410 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein -0.89
99 255403_at AT4G03400 DFL2 (DWARF IN LIGHT 2) 1.92
100 255298_at AT4G04840 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein 2.06
101 255064_at AT4G08950 phosphate-responsive protein, putative (EXO) -2.53
102 255805_at AT4G10240 zinc finger (B-box type) family protein -1.81
103 254954_at AT4G10910 unknown protein -1.75
104 254876_at AT4G11610 C2 domain-containing protein -1.26
105 254685_at AT4G13790 auxin-responsive protein, putative -2.38
106 245328_at AT4G14465 DNA-binding protein-related -1.16
107 245558_at AT4G15430 similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G04340.1); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G04340.3); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT3G21620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24038.1); similar to CM0545.360.nc [Lotus japonicus] (GB:BAF98597.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69661.1); contains InterPro domain Protein of unknown function DUF221; (InterPro:IPR003864) 1.74
108 245439_at AT4G16670 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39969.1); contains InterPro domain Pleckstrin-like, plant (InterPro:IPR013666); contains InterPro domain Protein of unknown function DUF828, plant (InterPro:IPR008546); contains InterPro domain Pleckstrin-like (InterPro:IPR001849) -1.58
109 245276_at AT4G16780 ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2); DNA binding / transcription factor -1.82
110 245346_at AT4G17090 CT-BMY (BETA-AMYLASE 3, BETA-AMYLASE 8); beta-amylase 1.83
111 254384_at AT4G21870 26.5 kDa class P-related heat shock protein (HSP26.5-P) 1.65
112 254145_at AT4G24700 unknown protein 1.95
113 254110_at AT4G25260 invertase/pectin methylesterase inhibitor family protein -1.13
114 254075_at AT4G25470 CBF2 (FREEZING TOLERANCE QTL 4); DNA binding / transcription activator/ transcription factor 2.36
115 253943_at AT4G27030 small conjugating protein ligase 2.44
116 253423_at AT4G32280 IAA29 (indoleacetic acid-induced protein 29); transcription factor -2.62
117 253155_at AT4G35720 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23717.1); contains InterPro domain Protein of unknown function DUF241, plant (InterPro:IPR004320) -1.93
118 253104_at AT4G36010 pathogenesis-related thaumatin family protein -1.37
119 253054_at AT4G37580 HLS1 (HOOKLESS 1); N-acetyltransferase -1.45
120 252924_at AT4G39070 zinc finger (B-box type) family protein -1.09
121 251058_at AT5G01790 unknown protein -1.32
122 251025_at AT5G02190 ATASP38/PCS1 (PROMOTION OF CELL SURVIVAL1); aspartic-type endopeptidase/ peptidase -1.25
123 251026_at AT5G02200 FHL (FAR-RED-ELONGATED HYPOCOTYL1-LIKE); protein binding -0.89
124 251020_at AT5G02270 ATNAP9 (Non-intrinsic ABC protein 9) 2.61
125 251010_at AT5G02550 unknown protein -0.96
126 251012_at AT5G02580 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55240.1); similar to hypothetical protein OsI_019565 [Oryza sativa (indica cultivar-group)] (GB:EAY98332.1); similar to Os05g0462000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055765.1); contains InterPro domain Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476) -2.42
127 250662_at AT5G07010 sulfotransferase family protein -1.51
128 245906_at AT5G11070 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G35090.1) -0.93
129 250420_at AT5G11260 HY5 (ELONGATED HYPOCOTYL 5); DNA binding / transcription factor 2.47
130 250108_at AT5G15150 ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3); DNA binding / transcription factor -1.02
131 246468_at AT5G17050 UDP-glucoronosyl/UDP-glucosyl transferase family protein 1.93
132 250099_at AT5G17300 myb family transcription factor 2.66
133 249996_at AT5G18600 glutaredoxin family protein -1.74
134 246126_at AT5G20070 ATNUDT19 (Arabidopsis thaliana Nudix hydrolase homolog 19); hydrolase 2.10
135 246071_at AT5G20150 SPX (SYG1/Pho81/XPR1) domain-containing protein -0.89
136 249798_at AT5G23730 nucleotide binding 3.01
137 249818_at AT5G23860 TUB8 (tubulin beta-8) -0.90
138 249769_at AT5G24120 SIGE (RNA polymerase sigma subunit E); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor 4.22
139 249741_at AT5G24470 APRR5 (PSEUDO-RESPONSE REGULATOR 5); transcription regulator 2.18
140 246966_at AT5G24850 CRY3 (CRYPTOCHROME 3); DNA binding / DNA photolyase/ FMN binding 2.34
141 245861_at AT5G28300 trihelix DNA-binding protein, putative -1.22
142 249677_at AT5G35970 DNA-binding protein, putative 1.88
143 249527_at AT5G38710 proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative -1.15
144 249063_at AT5G44110 POP1 4.35
145 249035_at AT5G44190 GLK2 (GOLDEN2-LIKE 2); DNA binding / transcription factor 2.43
146 249065_at AT5G44260 zinc finger (CCCH-type) family protein -2.02
147 248759_at AT5G47610 zinc finger (C3HC4-type RING finger) family protein 1.72
148 248657_at AT5G48570 peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative 1.70
149 248347_at AT5G52250 transducin family protein / WD-40 repeat family protein 2.68
150 248213_at AT5G53660 AtGRF7 (GROWTH-REGULATING FACTOR 7) -1.95
151 248208_at AT5G53980 ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52); transcription factor -1.99
152 248197_at AT5G54190 PORA (Protochlorophyllide reductase A); oxidoreductase/ protochlorophyllide reductase -1.00
153 247878_at AT5G57760 unknown protein -1.48
154 247786_at AT5G58600 PMR5 (POWDERY MILDEW RESISTANT 5) -0.90
155 247779_at AT5G58760 DDB2 (DAMAGED DNA-BINDING 2); nucleotide binding 1.85
156 247474_at AT5G62280 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49726.1); contains InterPro domain Protein of unknown function DUF1442 (InterPro:IPR009902) -1.36
157 247352_at AT5G63650 SNRK2-5/SNRK2.5/SRK2H (SNF1-RELATED PROTEIN KINASE 2.5); kinase -0.87
158 247232_at AT5G64940 ATATH13 (ABC2 homolog 13) 1.71
159 247159_at AT5G65800 ACS5 (ACC SYNTHASE 5); 1-aminocyclopropane-1-carboxylate synthase -1.50
160 247074_at AT5G66590 allergen V5/Tpx-1-related family protein -1.19
161 247023_at AT5G67060 HEC1 (HECATE 1); transcription factor -1.12
162 244994_at ATCG01010 Chloroplast encoded NADH dehydrogenase unit. -1.13