marker gene list
Mutant nph4-1_arf19-1
2,3,5-Triiodobenzoic acid3 h
･･･up requlated genes
･･･down regulated genes
probeID AGICode Annotation gene
expression
1 261576_at AT1G01070 nodulin MtN21 family protein 1.25
2 261562_at AT1G01750 actin-depolymerizing factor, putative -1.20
3 260957_at AT1G06080 ADS1 (DELTA 9 DESATURASE 1); oxidoreductase -1.42
4 256060_at AT1G07050 CONSTANS-like protein-related 1.27
5 263207_at AT1G10550 XTH33 (xyloglucan:xyloglucosyl transferase 33); hydrolase, acting on glycosyl bonds -1.36
6 261768_at AT1G15550 GA4 (GA REQUIRING 4); gibberellin 3-beta-dioxygenase -1.27
7 262704_at AT1G16530 ASL9/LBD3 (LOB DOMAIN-CONTAINING PROTEIN 3) 1.18
8 256012_at AT1G19250 FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1); monooxygenase 1.53
9 260668_at AT1G19530 similar to unnamed protein product [Vitis vinifera] (GB:CAO61141.1) -2.65
10 255814_at AT1G19900 glyoxal oxidase-related -1.59
11 261221_at AT1G19960 similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT2G32140.1) 2.14
12 255941_at AT1G20350 ATTIM17-1 (Arabidopsis thaliana translocase inner membrane subunit 17-1); P-P-bond-hydrolysis-driven protein transmembrane transporter -1.59
13 259789_at AT1G29395 COR414-TM1 (cold regulated 414 thylakoid membrane 1) 1.50
14 260024_at AT1G30080 glycosyl hydrolase family 17 protein 1.41
15 263227_at AT1G30750 similar to Hypothetical protein CBG24759 [Caenorhabditis briggsae] (GB:CAE56916.1); contains InterPro domain Protein of unknown function DUF1720 (InterPro:IPR013182) -1.24
16 259624_at AT1G43020 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G21060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66316.1); contains InterPro domain Protein of unknown function DUF547 (InterPro:IPR006869) -1.35
17 264415_at AT1G43160 RAP2.6 (related to AP2 6); DNA binding / transcription factor -1.67
18 260941_at AT1G44970 peroxidase, putative -1.35
19 265053_at AT1G52000 jacalin lectin family protein 1.31
20 262154_at AT1G52700 phospholipase/carboxylesterase family protein 1.39
21 262915_at AT1G59940 ARR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator -1.46
22 265111_at AT1G62510 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein -1.39
23 261975_at AT1G64640 plastocyanin-like domain-containing protein -1.24
24 264157_at AT1G65310 ATXTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17); hydrolase, acting on glycosyl bonds -1.38
25 260221_at AT1G74670 gibberellin-responsive protein, putative -3.12
26 262050_at AT1G80130 binding 1.42
27 267472_at AT2G02850 ARPN (PLANTACYANIN); copper ion binding 1.18
28 265414_at AT2G16660 nodulin family protein 1.54
29 266799_at AT2G22860 ATPSK2 (PHYTOSULFOKINE 2 PRECURSOR); growth factor -1.55
30 245076_at AT2G23170 GH3.3; indole-3-acetic acid amido synthetase 2.50
31 266578_at AT2G23910 cinnamoyl-CoA reductase-related 1.11
32 266656_at AT2G25900 ATCTH (Arabidopsis thaliana Cys3His zinc finger protein); transcription factor -1.21
33 257365_x_at AT2G26020 PDF1.2b (plant defensin 1.2b) 3.11
34 266209_at AT2G27550 ATC (ARABIDOPSIS THALIANA CENTRORADIALIS); phosphatidylethanolamine binding 1.50
35 263437_at AT2G28670 disease resistance-responsive family protein / fibroin-related -1.49
36 267461_at AT2G33830 dormancy/auxin associated family protein -1.33
37 266996_at AT2G34490 CYP710A2 (cytochrome P450, family 710, subfamily A, polypeptide 2); C-22 sterol desaturase/ oxygen binding 1.20
38 266989_at AT2G39330 jacalin lectin family protein 2.14
39 267357_at AT2G40000 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41329.1); contains InterPro domain Hs1pro-1, C-terminal (InterPro:IPR009743); contains InterPro domain Hs1pro-1, N-terminal (InterPro:IPR009869) -1.39
40 255822_at AT2G40610 ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8) -3.02
41 267101_at AT2G41480 peroxidase 1.36
42 260551_at AT2G43510 ATTI1 (ARABIDOPSIS THALIANA TRYPSIN INHIBITOR PROTEIN 1) 1.59
43 260557_at AT2G43610 glycoside hydrolase family 19 protein -1.41
44 267502_at AT2G45550 CYP76C4 (cytochrome P450, family 76, subfamily C, polypeptide 4); oxygen binding 1.12
45 259276_at AT3G01190 peroxidase 27 (PER27) (P27) (PRXR7) -1.42
46 258983_at AT3G08860 alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative 3.60
47 258764_at AT3G10720 pectinesterase, putative -1.38
48 259291_at AT3G11550 integral membrane family protein -1.50
49 256244_at AT3G12520 SULTR4;2 (sulfate transporter 4;2); sulfate transmembrane transporter 1.45
50 257701_at AT3G12710 methyladenine glycosylase family protein -1.48
51 258270_at AT3G15650 phospholipase/carboxylesterase family protein 1.71
52 258145_at AT3G18200 nodulin MtN21 family protein -1.46
53 257720_at AT3G18450 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68031.1); contains InterPro domain Protein of unknown function Cys-rich (InterPro:IPR006461) -1.24
54 257670_at AT3G20340 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. -1.27
55 258184_at AT3G21510 AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 3); histidine phosphotransfer kinase -1.31
56 258078_at AT3G25870 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13360.1); similar to unknown [Populus trichocarpa] (GB:ABK92948.1) 1.26
57 256878_at AT3G26460 major latex protein-related / MLP-related 2.06
58 258277_at AT3G26830 PAD3 (PHYTOALEXIN DEFICIENT 3); oxygen binding 1.34
59 252296_at AT3G48970 copper-binding family protein -1.60
60 252269_at AT3G49580 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49570.1); similar to unknown protein [Brassica rapa subsp. pekinensis] (GB:AAQ92331.1) 3.19
61 252238_at AT3G49960 peroxidase, putative -1.60
62 252172_at AT3G50640 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66800.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61148.1) -1.67
63 246302_at AT3G51860 CAX3 (cation exchanger 3); cation:cation antiporter 1.31
64 251857_at AT3G54770 RNA recognition motif (RRM)-containing protein -1.28
65 251722_at AT3G56200 amino acid transporter family protein 1.11
66 251436_at AT3G59900 (ARGOS); unknown protein -1.82
67 255621_at AT4G01390 meprin and TRAF homology domain-containing protein / MATH domain-containing protein 1.76
68 255333_at AT4G04410 transposable element gene 4.24
69 254718_at AT4G13580 disease resistance-responsive family protein -1.24
70 245624_at AT4G14090 UDP-glucoronosyl/UDP-glucosyl transferase family protein 2.62
71 245275_at AT4G15210 ATBETA-AMY (BETA-AMYLASE); beta-amylase 2.65
72 245528_at AT4G15530 PPDK (PYRUVATE ORTHOPHOSPHATE DIKINASE); kinase/ pyruvate, phosphate dikinase 1.23
73 245504_at AT4G15660 glutaredoxin family protein -1.35
74 245506_at AT4G15700 glutaredoxin family protein -1.69
75 254644_at AT4G18510 CLE2 (CLAVATA3/ESR-RELATED); receptor binding -1.26
76 254609_at AT4G18970 GDSL-motif lipase/hydrolase family protein -1.40
77 254606_at AT4G19030 NLM1 (NOD26-like intrinsic protein 1;1); water channel -1.67
78 254543_at AT4G19810 glycosyl hydrolase family 18 protein 1.44
79 254467_at AT4G20450 leucine-rich repeat protein kinase, putative -1.24
80 254468_at AT4G20460 NAD-dependent epimerase/dehydratase family protein -1.33
81 254240_at AT4G23496 SP1L5 (SPIRAL1-LIKE5) 1.96
82 253763_at AT4G28850 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative -1.32
83 253627_at AT4G30650 hydrophobic protein, putative / low temperature and salt responsive protein, putative 1.35
84 253207_at AT4G34770 auxin-responsive family protein -1.54
85 246228_at AT4G36430 peroxidase, putative 1.49
86 252882_at AT4G39675 unknown protein -1.49
87 251144_at AT5G01210 transferase family protein -1.32
88 251065_at AT5G01870 lipid transfer protein, putative -2.39
89 251028_at AT5G02230 haloacid dehalogenase-like hydrolase family protein 1.22
90 251017_at AT5G02760 protein phosphatase 2C family protein / PP2C family protein -1.97
91 245689_at AT5G04120 phosphoglycerate/bisphosphoglycerate mutase family protein 1.66
92 250499_at AT5G09730 BXL3 (BETA-XYLOSIDASE 3); hydrolase, hydrolyzing O-glycosyl compounds 1.55
93 250435_at AT5G10380 zinc finger (C3HC4-type RING finger) family protein 1.40
94 250327_at AT5G12050 similar to unnamed protein product [Vitis vinifera] (GB:CAO45643.1) -1.28
95 250142_at AT5G14650 polygalacturonase, putative / pectinase, putative 1.45
96 249955_at AT5G18840 sugar transporter, putative 1.70
97 245971_at AT5G20730 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); transcription factor -3.05
98 249917_at AT5G22460 esterase/lipase/thioesterase family protein 1.29
99 249752_at AT5G24660 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24655.1); similar to unknown protein [Brassica rapa subsp. pekinensis] (GB:AAQ92331.1) 1.68
100 246932_at AT5G25190 ethylene-responsive element-binding protein, putative -1.67
101 246919_at AT5G25460 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11420.1); similar to unknown [Ricinus communis] (GB:CAB02653.1); contains InterPro domain Protein of unknown function DUF642 (InterPro:IPR006946) -2.01
102 246682_at AT5G33290 XGD1 (XYLOGALACTURONAN DEFICIENT 1); catalytic 1.18
103 249576_at AT5G37690 GDSL-motif lipase/hydrolase family protein 1.09
104 249599_at AT5G37990 S-adenosylmethionine-dependent methyltransferase 2.06
105 249567_at AT5G38020 S-adenosyl-L-methionine:carboxyl methyltransferase family protein 1.22
106 249215_at AT5G42800 DFR (DIHYDROFLAVONOL 4-REDUCTASE); dihydrokaempferol 4-reductase 1.77
107 249174_at AT5G42900 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75496.1) 1.82
108 249052_at AT5G44420 PDF1.2 (Low-molecular-weight cysteine-rich 77) 2.31
109 248978_at AT5G45070 ATPP2-A8 (Phloem protein 2-A8); transmembrane receptor 1.35
110 248910_at AT5G45820 CIPK20 (CBL-INTERACTING PROTEIN KINASE 20); kinase -1.80
111 248812_at AT5G47330 palmitoyl protein thioesterase family protein 1.43
112 248676_at AT5G48850 male sterility MS5 family protein 2.93
113 248569_at AT5G49770 leucine-rich repeat transmembrane protein kinase, putative -1.27
114 248509_at AT5G50335 unknown protein -3.26
115 248528_at AT5G50760 auxin-responsive family protein -1.21
116 248372_at AT5G51850 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17701.1) 1.81
117 248185_at AT5G54060 UF3GT (UDP-GLUCOSE:FLAVONOID 3-O-GLUCOSYLTRANSFERASE); transferase, transferring glycosyl groups 1.77
118 247951_at AT5G57240 oxysterol-binding family protein -2.07
119 247871_at AT5G57530 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative -1.25
120 247878_at AT5G57760 unknown protein -2.02
121 247800_at AT5G58570 unknown protein 1.50
122 247765_at AT5G58860 CYP86A1 (cytochrome P450, family 86, subfamily A, polypeptide 1); oxygen binding 1.27
123 247577_at AT5G61290 flavin-containing monooxygenase family protein / FMO family protein 1.15
124 247474_at AT5G62280 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49726.1); contains InterPro domain Protein of unknown function DUF1442 (InterPro:IPR009902) -1.74
125 247477_at AT5G62340 invertase/pectin methylesterase inhibitor family protein -1.54
126 247478_at AT5G62360 invertase/pectin methylesterase inhibitor family protein 1.42
127 247280_at AT5G64260 phosphate-responsive protein, putative -1.48
128 247013_at AT5G67480 BT4 (BTB AND TAZ DOMAIN PROTEIN 4); protein binding / transcription regulator 1.11