marker gene list
Mutant pif1-2 (Dark, etiol)
Mutant pif1-2 (Dark, etiol)
･･･up requlated genes
･･･down regulated genes
probeID AGICode Annotation gene
expression
1 261177_at AT1G04770 male sterility MS5 family protein -1.35
2 261387_at AT1G05410 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22520.1); similar to CDPK adapter protein 1 [Mesembryanthemum crystallinum] (GB:AAK69758.1) 0.63
3 260742_at AT1G15050 IAA34 (indoleacetic acid-induced protein 34); transcription factor 0.98
4 262754_at AT1G16350 inosine-5'-monophosphate dehydrogenase, putative -0.74
5 260662_at AT1G19540 isoflavone reductase, putative 0.75
6 264774_at AT1G22890 unknown protein 0.52
7 263196_at AT1G36070 WD-40 repeat family protein 0.65
8 261308_at AT1G48480 RKL1 (Receptor-like kinase 1); ATP binding / kinase/ protein serine/threonine kinase 0.60
9 262693_at AT1G62780 similar to hypothetical protein [Vitis vinifera] (GB:CAN83165.1) -0.84
10 260343_at AT1G69200 kinase -0.84
11 260143_at AT1G71880 SUC1 (SUCROSE-PROTON SYMPORTER 1); carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen ion symporter -0.79
12 267439_at AT2G19060 GDSL-motif lipase/hydrolase family protein 0.71
13 265581_at AT2G20050 protein serine/threonine phosphatase 0.61
14 265584_at AT2G20180 PIL5 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 5); transcription factor -4.64
15 267523_at AT2G30600 BTB/POZ domain-containing protein 0.57
16 267524_at AT2G30600 BTB/POZ domain-containing protein 0.67
17 245165_at AT2G33180 similar to unnamed protein product [Vitis vinifera] (GB:CAO41107.1) -0.77
18 255791_at AT2G33430 plastid developmental protein DAG, putative -0.77
19 266194_at AT2G39090 tetratricopeptide repeat (TPR)-containing protein 0.44
20 266992_at AT2G39200 MLO12 (MILDEW RESISTANCE LOCUS O 12); calmodulin binding 0.44
21 266984_at AT2G39570 ACT domain-containing protein 0.50
22 267080_at AT2G41190 amino acid transporter family protein 0.86
23 260543_at AT2G43330 ATINT1 (INOSITOL TRANSPORTER 1); carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter 0.56
24 245133_at AT2G45310 GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE 4); catalytic -0.93
25 259098_at AT3G04790 ribose 5-phosphate isomerase-related -0.76
26 257856_at AT3G12930 similar to unknown [Populus trichocarpa] (GB:ABK94112.1); contains InterPro domain Iojap-related protein (InterPro:IPR004394) -0.76
27 258339_at AT3G16120 dynein light chain, putative 0.85
28 257964_at AT3G19850 phototropic-responsive NPH3 family protein 0.49
29 258458_at AT3G22435 XS domain-containing protein 0.49
30 252568_at AT3G45410 lectin protein kinase family protein 0.48
31 252362_at AT3G48500 PDE312/PTAC10 (PIGMENT DEFECTIVE 312); RNA binding / unfolded protein binding -0.76
32 251497_at AT3G59060 PIL6 (PHYTOCHROME-INTERACTING FACTOR 5); DNA binding / transcription factor 0.63
33 255702_at AT4G00230 XSP1 (XYLEM SERINE PEPTIDASE 1); subtilase 0.56
34 255285_at AT4G04630 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G21970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17943.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) 0.75
35 255302_at AT4G04830 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein -0.81
36 255805_at AT4G10240 zinc finger (B-box type) family protein -1.54
37 245354_at AT4G17600 LIL3:1; transcription factor -0.92
38 254424_at AT4G21510 F-box family protein 0.45
39 253608_at AT4G30290 ATXTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19); hydrolase, acting on glycosyl bonds -0.96
40 253233_at AT4G34290 SWIB complex BAF60b domain-containing protein -0.90
41 245689_at AT5G04120 phosphoglycerate/bisphosphoglycerate mutase family protein -1.50
42 249167_at AT5G42860 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45688.1); similar to H0814G11.12 [Oryza sativa (indica cultivar-group)] (GB:CAJ86345.1); similar to CAA30379.1 protein [Oryza sativa] (GB:CAB53482.1) -1.18
43 249010_at AT5G44580 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G44582.1) -0.86
44 248533_at AT5G50020 zinc finger (DHHC type) family protein 0.48
45 248435_at AT5G51210 OLEO3 (OLEOSIN3) -0.80
46 248197_at AT5G54190 PORA (Protochlorophyllide reductase A); oxidoreductase/ protochlorophyllide reductase -1.15
47 248163_at AT5G54510 DFL1/GH3.6 (DWARF IN LIGHT 1); indole-3-acetic acid amido synthetase 0.52
48 247908_at AT5G57440 GS1 (GLYCEROL-3-PHOSPHATASE 2); hydrolase 0.45
49 247878_at AT5G57760 unknown protein -1.31
50 244966_at ATCG00600 Cytochrome b6-f complex, subunit V. Disruption of homologous gene in Chlamydomonas results in disruption of cytochrome b6-f complex. -0.82
51 244934_at ATCG01080 NADH dehydrogenase ND6 -0.81