marker gene list
Norflurazon
Mutant lfy-12(shoot apex)
･･･up requlated genes
･･･down regulated genes
probeID AGICode Annotation gene
expression
1 262112_at AT1G02870 similar to unnamed protein product [Vitis vinifera] (GB:CAO39998.1); contains domain PD099709 (PD099709) 1.30
2 263114_at AT1G03130 PSAD-2 (photosystem I subunit D-2) -3.80
3 264839_at AT1G03630 POR C (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE); NADPH dehydrogenase/ oxidoreductase/ protochlorophyllide reductase -2.95
4 265067_at AT1G03850 glutaredoxin family protein 1.64
5 260957_at AT1G06080 ADS1 (DELTA 9 DESATURASE 1); oxidoreductase -3.25
6 260824_at AT1G06720 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G42440.1); similar to hypothetical protein OsJ_010296 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26813.1); similar to hypothetical protein OsI_011117 [Oryza sativa (indica cultivar-group)] (GB:EAY89884.1); similar to hypothetical protein CHLREDRAFT_113591 [Chlamydomonas reinhardtii] (GB:XP_001698464.1); contains InterPro domain AARP2CN; (InterPro:IPR012948); contains InterPro domain Protein of unknown function DUF663 (InterPro:IPR007034) 2.18
7 261435_at AT1G07615 GTP binding 1.67
8 261746_at AT1G08380 PSAO (photosystem I subunit O) -3.44
9 264809_at AT1G08830 CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1); copper, zinc superoxide dismutase 2.48
10 264514_at AT1G09500 cinnamyl-alcohol dehydrogenase family / CAD family -2.57
11 264510_at AT1G09530 PAP3/PIF3/POC1 (PHYTOCHROME INTERACTING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription regulator -2.28
12 264460_at AT1G10170 ATNFXL1; transcription factor 2.43
13 261826_at AT1G11580 ATPMEPCRA; pectinesterase 1.59
14 259511_at AT1G12520 CCS1 (copper chaperone for superoxide dismutase 1); superoxide dismutase copper chaperone 2.42
15 262766_at AT1G13160 SDA1 family protein 1.28
16 259409_at AT1G13330 similar to unnamed protein product [Vitis vinifera] (GB:CAO42122.1); contains InterPro domain Tat binding protein 1-interacting (InterPro:IPR010776) 1.99
17 262612_at AT1G14150 oxygen evolving enhancer 3 (PsbQ) family protein -3.60
18 259502_at AT1G15670 kelch repeat-containing F-box family protein 1.41
19 256115_at AT1G16880 uridylyltransferase-related -2.48
20 261422_at AT1G18730 similar to unknown [Populus trichocarpa] (GB:ABK95263.1) -3.73
21 259466_at AT1G19050 ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator 1.50
22 256015_at AT1G19150 LHCA6 (Photosystem I light harvesting complex gene 6); chlorophyll binding -4.52
23 261218_at AT1G20020 ATLFNR2 (LEAF FNR 2); NADPH dehydrogenase/ oxidoreductase/ poly(U) binding -3.00
24 259553_x_at AT1G21310 ATEXT3 (EXTENSIN 3); structural constituent of cell wall 1.26
25 260877_at AT1G21500 similar to hypothetical protein OsI_030994 [Oryza sativa (indica cultivar-group)] (GB:EAZ09762.1); similar to Os09g0517000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063677.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33829.1) -4.53
26 261942_at AT1G22590 AGL87; transcription factor -2.40
27 259579_at AT1G28010 PGP14 (P-GLYCOPROTEIN 14); ATPase, coupled to transmembrane movement of substances 1.47
28 259789_at AT1G29395 COR414-TM1 (cold regulated 414 thylakoid membrane 1) -2.85
29 256497_at AT1G31580 ECS1 -3.05
30 255719_at AT1G32080 membrane protein, putative -2.38
31 256459_at AT1G36180 ATP binding / biotin binding / catalytic/ ligase 3.55
32 245213_at AT1G44575 NPQ4 (NONPHOTOCHEMICAL QUENCHING) -3.34
33 261684_at AT1G47400 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G47395.1) -3.10
34 260765_at AT1G49240 ACT8 (ACTIN 8); structural constituent of cytoskeleton 1.19
35 246630_at AT1G50730 similar to unnamed protein product [Vitis vinifera] (GB:CAO38919.1); contains domain PTHR13673 (PTHR13673) -2.42
36 265149_at AT1G51400 photosystem II 5 kD protein -2.90
37 259840_at AT1G52230 PSAH-2/PSAH2/PSI-H (PHOTOSYSTEM I SUBUNIT H-2) -4.01
38 260157_at AT1G52930 brix domain-containing protein 1.57
39 260984_at AT1G53645 hydroxyproline-rich glycoprotein family protein 1.70
40 264545_at AT1G55670 PSAG -2.71
41 265006_at AT1G61570 TIM13; P-P-bond-hydrolysis-driven protein transmembrane transporter 1.18
42 265061_at AT1G61640 ABC1 family protein 1.26
43 262693_at AT1G62780 similar to hypothetical protein [Vitis vinifera] (GB:CAN83165.1) -2.44
44 260343_at AT1G69200 kinase 1.18
45 262288_at AT1G70760 inorganic carbon transport protein-related -3.41
46 262309_at AT1G70820 phosphoglucomutase, putative / glucose phosphomutase, putative -7.50
47 262175_at AT1G74880 NDH-O (NAD(P)H:PLASTOQUINONE DEHYDROGENASE COMPLEX SUBUNIT O) -2.54
48 261118_at AT1G75460 ATP-dependent protease La (LON) domain-containing protein -3.34
49 261769_at AT1G76100 plastocyanin -5.09
50 259982_at AT1G76410 ATL8; protein binding / zinc ion binding 1.18
51 263597_at AT2G01870 similar to unnamed protein product [Vitis vinifera] (GB:CAO21902.1) -2.78
52 263403_at AT2G04040 ATDTX1; antiporter/ multidrug efflux pump/ multidrug transporter/ transporter 3.50
53 263402_at AT2G04050 MATE efflux family protein 4.33
54 265326_at AT2G18220 Identical to Nucleolar complex protein 2 homolog [Arabidopsis Thaliana] (GB:Q9ZPV5); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55510.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81729.1); contains InterPro domain Protein of unknown function UPF0120 (InterPro:IPR005343) 1.48
55 265340_at AT2G18330 AAA-type ATPase family protein 1.52
56 265287_at AT2G20260 PSAE-2 (photosystem I subunit E-2); catalytic -3.27
57 265259_at AT2G20330 transducin family protein / WD-40 repeat family protein 1.18
58 265442_at AT2G20940 similar to unknown [Populus trichocarpa] (GB:ABK95988.1); contains InterPro domain Protein of unknown function DUF1279 (InterPro:IPR009688) 1.70
59 263515_at AT2G21640 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05570.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G39235.1); similar to hypothetical protein OsI_027197 [Oryza sativa (indica cultivar-group)] (GB:EAZ05965.1) 3.60
60 266572_at AT2G23840 HNH endonuclease domain-containing protein -2.29
61 265999_at AT2G24100 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66612.1) 2.16
62 265611_at AT2G25510 unknown protein -3.89
63 266165_at AT2G28190 CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2); copper, zinc superoxide dismutase 2.97
64 266277_at AT2G29310 tropinone reductase, putative / tropine dehydrogenase, putative -2.33
65 266673_at AT2G29630 thiamine biosynthesis family protein / thiC family protein -2.77
66 257352_at AT2G34900 IMB1 (IMBIBITION-INDUCIBLE 1); DNA binding 1.24
67 266636_at AT2G35370 GDCH (Glycine decarboxylase complex H) -2.84
68 267142_at AT2G38290 ATAMT2 (AMMONIUM TRANSPORTER 2); ammonium transmembrane transporter 1.66
69 266979_at AT2G39470 PPL2 (PSBP-LIKE PROTEIN 2); calcium ion binding -3.35
70 263836_at AT2G40330 Bet v I allergen family protein 6.38
71 267635_at AT2G42220 rhodanese-like domain-containing protein -2.96
72 260605_at AT2G43780 similar to hypothetical protein OsI_037823 [Oryza sativa (indica cultivar-group)] (GB:EAY83864.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99375.1); similar to Os12g0611700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067254.1) 1.45
73 267371_at AT2G44510 p21Cip1-binding protein-related 1.34
74 266884_at AT2G44790 UCC2 (UCLACYANIN 2); copper ion binding 1.21
75 245122_at AT2G47420 dimethyladenosine transferase, putative 1.42
76 258956_at AT3G01440 oxygen evolving enhancer 3 (PsbQ) family protein -4.22
77 259161_at AT3G01500 CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding -8.09
78 259185_at AT3G01550 triose phosphate/phosphate translocator, putative -2.31
79 259123_at AT3G02200 proteasome family protein 1.28
80 258607_at AT3G02730 ATF1/TRXF1 (THIOREDOXIN F-TYPE 1); thiol-disulfide exchange intermediate -2.57
81 259196_at AT3G03600 RPS2 (RIBOSOMAL PROTEIN S2); structural constituent of ribosome 1.21
82 259173_at AT3G03640 GLUC (Beta-glucosidase homolog); hydrolase, hydrolyzing O-glycosyl compounds 1.58
83 258545_at AT3G07050 GTP-binding family protein 1.91
84 257058_at AT3G15352 ATCOX17 (Arabidopsis thaliana cytochrome c oxidase 17) 1.33
85 258285_at AT3G16140 PSAH-1 (photosystem I subunit H-1) -3.86
86 258055_at AT3G16250 ferredoxin-related -4.98
87 258404_at AT3G17465 RPL3P (ribosomal protein large subunit 3P); structural constituent of ribosome 1.28
88 256979_at AT3G21055 PSBTN (photosystem II subunit T) -3.27
89 257947_at AT3G21720 isocitrate lyase, putative 3.72
90 258316_at AT3G22660 rRNA processing protein-related 2.17
91 257832_at AT3G26740 CCL (CCR-LIKE) -3.23
92 257149_at AT3G27280 ATPHB4 (PROHIBITIN 4) 1.21
93 258239_at AT3G27690 LHCB2:4 (Photosystem II light harvesting complex gene 2.3); chlorophyll binding -5.28
94 256577_at AT3G28220 meprin and TRAF homology domain-containing protein / MATH domain-containing protein -3.05
95 256603_at AT3G28270 Identical to UPF0496 protein At3g28270 [Arabidopsis Thaliana] (GB:Q9LHD9;GB:Q8H7D0;GB:Q8H7E9;GB:Q944H3); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) -8.29
96 252618_at AT3G45140 LOX2 (LIPOXYGENASE 2) -4.89
97 252366_at AT3G48420 haloacid dehalogenase-like hydrolase family protein -2.86
98 252281_at AT3G49320 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62930.1); contains InterPro domain Metal-dependent protein hydrolase (InterPro:IPR003226) 1.18
99 252181_at AT3G50685 similar to unnamed protein product [Vitis vinifera] (GB:CAO22868.1) -2.70
100 251814_at AT3G54890 LHCA1; chlorophyll binding -3.18
101 251762_at AT3G55800 SBPASE (SEDOHEPTULOSE-BISPHOSPHATASE); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase -2.86
102 251735_at AT3G56090 ATFER3 (FERRITIN 3); ferric iron binding 1.44
103 251563_at AT3G57880 C2 domain-containing protein 1.17
104 251218_at AT3G62410 CP12-2 -4.23
105 251157_at AT3G63140 mRNA-binding protein, putative -3.61
106 251155_at AT3G63160 unknown protein -6.81
107 255711_at AT4G00090 transducin family protein / WD-40 repeat family protein 1.34
108 255586_at AT4G01560 MEE49 (maternal effect embryo arrest 49) 1.40
109 255457_at AT4G02770 PSAD-1 (photosystem I subunit D-1) -3.54
110 255382_at AT4G03430 EMB2770/STA1 (STABILIZED1); RNA splicing factor, transesterification mechanism 1.41
111 255248_at AT4G05180 PSBQ/PSBQ-2/PSII-Q (PHOTOSYSTEM II SUBUNIT Q-2); calcium ion binding -4.90
112 255078_at AT4G09010 APX4 (ASCORBATE PEROXIDASE 4); peroxidase -2.64
113 255088_at AT4G09350 DNAJ heat shock N-terminal domain-containing protein -2.55
114 255011_at AT4G10040 CYTC-2 (CYTOCHROME C-2); electron carrier 2.40
115 255809_at AT4G10300 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04300.1); similar to unknown [Populus trichocarpa] (GB:ABK95374.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051) -2.88
116 254778_at AT4G12750 sequence-specific DNA binding / transcription factor 1.28
117 254790_at AT4G12800 PSAL (photosystem I subunit L) -2.46
118 254783_at AT4G12830 hydrolase, alpha/beta fold family protein -2.85
119 245399_at AT4G17340 DELTA-TIP2/TIP2;2 (tonoplast intrinsic protein 2;2); water channel -2.30
120 254398_at AT4G21280 PSBQ/PSBQ-1/PSBQA; calcium ion binding -2.70
121 254361_at AT4G22212 Encodes a defensin-like (DEFL) family protein. 1.42
122 254298_at AT4G22890 PGR5-LIKE A -2.35
123 254079_at AT4G25730 FtsJ-like methyltransferase family protein 2.08
124 254016_at AT4G26150 CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1); transcription factor 1.54
125 253971_at AT4G26530 fructose-bisphosphate aldolase, putative -10.04
126 253955_at AT4G27000 ATRBP45C; RNA binding 1.26
127 253871_at AT4G27440 PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B); oxidoreductase/ protochlorophyllide reductase -3.64
128 253860_at AT4G27700 rhodanese-like domain-containing protein -2.57
129 253849_at AT4G28080 binding -3.12
130 253777_at AT4G28450 transducin family protein / WD-40 repeat family protein 1.47
131 253492_at AT4G31810 enoyl-CoA hydratase/isomerase family protein 1.74
132 253387_at AT4G33010 ATGLDP1 (ARABIDOPSIS THALIANA GLYCINE DECARBOXYLASE P-PROTEIN 1); glycine dehydrogenase (decarboxylating) -2.30
133 253344_at AT4G33550 lipid binding -3.42
134 253175_at AT4G35050 MSI3 (NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 3); protein binding 1.43
135 253051_at AT4G37490 CYC1 (CYCLIN 1); cyclin-dependent protein kinase regulator 1.92
136 253013_at AT4G37910 MTHSC70-1 (mitochondrial heat shock protein 70-1); ATP binding / unfolded protein binding 1.66
137 252912_at AT4G39200 40S ribosomal protein S25 (RPS25E) 1.72
138 252853_at AT4G39710 immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative -3.18
139 251065_at AT5G01870 lipid transfer protein, putative 1.23
140 251017_at AT5G02760 protein phosphatase 2C family protein / PP2C family protein -2.64
141 250192_at AT5G14520 pescadillo-related 1.50
142 246596_at AT5G14740 CA2 (BETA CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding -3.02
143 250087_at AT5G17270 tetratricopeptide repeat (TPR)-containing protein 1.68
144 246094_at AT5G19300 similar to unnamed protein product [Vitis vinifera] (GB:CAO71126.1); contains InterPro domain Protein of unknown function DUF171 (InterPro:IPR003750); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027) 1.89
145 245951_at AT5G19550 ASP2 (ASPARTATE AMINOTRANSFERASE 2) 1.36
146 245941_at AT5G19820 EMB2734 (EMBRYO DEFECTIVE 2734); lyase 1.42
147 246159_at AT5G20935 similar to unnamed protein product [Vitis vinifera] (GB:CAO67410.1) -2.62
148 249876_at AT5G23060 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G59780.1); similar to extracellular Ca2+ sensing receptor [Glycine max] (GB:ABY57763.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763) -2.86
149 246855_at AT5G26280 meprin and TRAF homology domain-containing protein / MATH domain-containing protein 1.33
150 249710_at AT5G35630 GS2 (GLUTAMINE SYNTHETASE 2); glutamate-ammonia ligase -3.04
151 249482_at AT5G38980 unknown protein -3.92
152 249253_at AT5G42060 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64490.1); contains InterPro domain DEK C terminal (InterPro:IPR014876) 1.33
153 249035_at AT5G44190 GLK2 (GOLDEN2-LIKE 2); DNA binding / transcription factor -2.40
154 249010_at AT5G44580 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G44582.1) -2.96
155 248771_at AT5G47790 forkhead-associated domain-containing protein / FHA domain-containing protein 2.21
156 248739_at AT5G48030 GFA2 (GAMETOPHYTIC FACTOR 2); heat shock protein binding / unfolded protein binding 1.30
157 248683_at AT5G48490 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein -3.75
158 248611_at AT5G49520 WRKY48 (WRKY DNA-binding protein 48); transcription factor 1.26
159 248462_at AT5G50960 nucleotide-binding family protein 1.37
160 248329_at AT5G52780 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49500.1) -2.34
161 248151_at AT5G54270 LHCB3 (LIGHT-HARVESTING CHLOROPHYLL BINDING PROTEIN 3) -3.76
162 248205_at AT5G54300 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39207.1); contains InterPro domain Protein of unknown function DUF761, plant (InterPro:IPR008480) 1.42
163 248102_at AT5G55140 ribosomal protein L30 family protein 1.42
164 247942_at AT5G57120 similar to unnamed protein product [Vitis vinifera] (GB:CAO69558.1); contains InterPro domain SRP40, C-terminal (InterPro:IPR007718); contains InterPro domain LisH dimerisation motif (InterPro:IPR006594) 1.22
165 247816_at AT5G58260 Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly. -2.81
166 247718_at AT5G59310 LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding -6.16
167 247615_at AT5G60250 zinc finger (C3HC4-type RING finger) family protein 1.93
168 247555_at AT5G61020 ECT3 (evolutionary conserved C-terminal 3) 1.56
169 247575_at AT5G61030 GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding 1.18
170 247449_at AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln) family protein 1.48
171 247453_at AT5G62440 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. 1.39
172 247403_at AT5G62740 band 7 family protein 1.48
173 247333_at AT5G63600 flavonol synthase, putative 1.76
174 247327_at AT5G64120 peroxidase, putative 1.73
175 244935_at ATCG01090 Encodes subunit of the chloroplast NAD(P)H dehydrogenase complex -2.31
176 244936_at ATCG01100 NADH dehydrogenase ND1 -3.15