AtGenExpress is a multinational coordinated effort to uncover the transcriptome of the multicellular model organism Arabidopsis thaliana. This large collaborative project will combine resources of gene expression patterns using Affymetrix GeneChip across the whole plant-life cycle.

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To find biological relationships among experiments available in public databases, correlations of transcriptome experiments were analyzed by module-based correlation approach, and then presented in networks.
This version is specific for data about phytohormones.

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    Redman, JC, Haas BJ, Tanimoto G, Town CD. (2004) Development and evaluation of an Arabidopsis whole genome Affymetrix probe array. Plant Journal 38: 545-561
    Schmid M, Davison TS, Henz SR, Pape UJ, Demar M, Vingron M, Scholkopf B, Weigel D, Lohmann JU (2005) A gene expression map of Arabidopsis thaliana development. Nature Genetics 37: 501-506
    Kilian J, Whitehead D, Horak J, Wanke D, Weinl S, Batistic O, D'Angelo C, Bornberg-Bauer E, Kudla J, Harter K (2007) The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses. Plant Journal 50: 347-363
    Goda H, Sasaki E, Akiyama K, Maruyama-Nakashita A, Nakabayashi K, Li W, Ogawa M, Yamauchi u, Preston J, Aoki K, Kiba T, Takatsuto S, Fujioka S, Asami T, Nakano T, Kato H, Mizuno T, Sakakibara H, Yamaguchi S, Nambara E, Kamiya Y, Takahashi H, Hirai MY, Sakurai T, Shinozaki K, Saito K, Yoshida S, Shimada Y (2008) The AtGenExpress hormone- and chemical-treatment data set: Experimental design, data evaluation, model data analysis, and data access. Plant Journal 130: 1319-1334