marker gene list
ABA 3 h
Cold Stress 24 h (shoot)
・・・up requlated genes
・・・down regulated genes
probeID AGICode Annotation gene
expression
1 260915_at AT1G02660 lipase class 3 family protein 3.87
2 265084_at AT1G03790 zinc finger (CCCH-type) family protein 6.21
3 265216_at AT1G05100 MAPKKK18 (Mitogen-activated protein kinase kinase kinase 18); kinase 6.96
4 256062_at AT1G07090 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G58500.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60458.1); contains InterPro domain Protein of unknown function DUF640 (InterPro:IPR006936) -2.30
5 261077_at AT1G07430 protein phosphatase 2C, putative / PP2C, putative 5.52
6 263210_at AT1G10585 transcription factor 4.62
7 262813_at AT1G11670 MATE efflux family protein -1.54
8 262831_at AT1G14730 similar to ACYB-2 (Arabidopsis cytochrome b561 -2), carbon-monoxide oxygenase [Arabidopsis thaliana] (TAIR:AT4G25570.1); similar to ACYB-1 (Arabidopsis cytochrome b561 -1), carbon-monoxide oxygenase [Arabidopsis thaliana] (TAIR:AT5G38630.1); similar to cytochrome [Mesembryanthemum crystallinum] (GB:AAD11424.1); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane (InterPro:IPR006593); contains InterPro domain Cytochrome b561; (InterPro:IPR004877) 4.51
9 262730_at AT1G16390 ATOCT3 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER2); carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter -2.11
10 259560_at AT1G21270 WAK2 (wall-associated kinase 2); protein serine/threonine kinase -2.73
11 262496_at AT1G21790 similar to unnamed protein product [Vitis vinifera] (GB:CAO61872.1); contains InterPro domain TRAM, LAG1 and CLN8 homology; (InterPro:IPR006634) 3.92
12 264859_at AT1G24280 G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3); glucose-6-phosphate dehydrogenase -2.13
13 265024_at AT1G24600 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67920.1) 6.40
14 264415_at AT1G43160 RAP2.6 (related to AP2 6); DNA binding / transcription factor 3.92
15 260727_at AT1G48100 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein 4.15
16 262448_at AT1G49450 transducin family protein / WD-40 repeat family protein 5.13
17 261611_at AT1G49730 protein kinase family protein -1.59
18 246371_at AT1G51940 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein -1.57
19 259841_at AT1G52200 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45876.1); contains InterPro domain Protein of unknown function Cys-rich (InterPro:IPR006461) -2.24
20 262148_at AT1G52560 26.5 kDa class I small heat shock protein-like (HSP26.5-P) 4.68
21 260203_at AT1G52890 ANAC019 (Arabidopsis NAC domain containing protein 19); transcription factor 7.87
22 260974_at AT1G53440 leucine-rich repeat family protein / protein kinase family protein -1.61
23 245627_at AT1G56600 ATGOLS2 (ARABIDOPSIS THALIANA GALACTINOL SYNTHASE 2); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups 8.80
24 262899_at AT1G59870 PDR8/PEN3 (PLEIOTROPIC DRUG RESISTANCE8); ATPase, coupled to transmembrane movement of substances / cadmium ion transmembrane transporter -1.63
25 264217_at AT1G60190 armadillo/beta-catenin repeat family protein / U-box domain-containing protein 6.24
26 265119_at AT1G62570 flavin-containing monooxygenase family protein / FMO family protein 4.55
27 255856_at AT1G66940 protein kinase-related -2.29
28 260264_at AT1G68500 similar to hypothetical protein [Vitis vinifera] (GB:CAN66643.1) 3.79
29 262229_at AT1G68620 hydrolase 4.99
30 260357_at AT1G69260 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41856.1); contains InterPro domain Protein of unknown function DUF1675 (InterPro:IPR012463) 4.89
31 260143_at AT1G71880 SUC1 (SUCROSE-PROTON SYMPORTER 1); carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen ion symporter -2.28
32 245724_at AT1G73390 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G17940.1); similar to unknown [Populus trichocarpa] (GB:ABK95976.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62047.1); contains InterPro domain BRO1 (InterPro:IPR004328) 3.78
33 260070_at AT1G73830 BEE3 (BR ENHANCED EXPRESSION 3); DNA binding / transcription factor -1.88
34 262680_at AT1G75880 family II extracellular lipase 1 (EXL1) 4.47
35 259878_at AT1G76790 O-methyltransferase family 2 protein -1.25
36 264956_at AT1G76990 ACR3 (ACT Domain Repeat 3) -1.58
37 259705_at AT1G77450 ANAC032 (Arabidopsis NAC domain containing protein 32); transcription factor 4.67
38 262134_at AT1G77990 AST56 (sulphate transporter 2;2); sulfate transmembrane transporter -1.35
39 262940_at AT1G79520 cation efflux family protein 7.85
40 262047_at AT1G80160 lactoylglutathione lyase family protein / glyoxalase I family protein 4.04
41 263421_at AT2G17230 phosphate-responsive 1 family protein -2.00
42 264618_at AT2G17680 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22785.1); contains InterPro domain Protein of unknown function DUF241, plant (InterPro:IPR004320) 3.88
43 264790_at AT2G17820 ATHK1 (HISTIDINE KINASE 1) -1.73
44 266950_at AT2G18910 hydroxyproline-rich glycoprotein family protein -1.48
45 267488_at AT2G19110 HMA4 (Heavy metal ATPase 4); cadmium-transporting ATPase -1.39
46 263881_at AT2G21820 similar to hypothetical protein MtrDRAFT_AC155884g16v2 [Medicago truncatula] (GB:ABN08202.1) 3.81
47 265913_at AT2G25625 similar to unnamed protein product [Vitis vinifera] (GB:CAO44157.1) 3.91
48 266253_at AT2G27840 HDT4 (histone deacetylase 13) -1.36
49 266274_at AT2G29380 protein phosphatase 2C, putative / PP2C, putative 5.96
50 266267_at AT2G29460 ATGSTU4 (GLUTATHIONE S-TRANSFERASE 22); glutathione transferase 3.80
51 266805_at AT2G30010 similar to PMR5 (POWDERY MILDEW RESISTANT 5) [Arabidopsis thaliana] (TAIR:AT5G58600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21434.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) -2.48
52 266474_at AT2G31110 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69853.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) -1.28
53 265672_at AT2G31980 cysteine proteinase inhibitor-related 4.56
54 255795_at AT2G33380 RD20 (RESPONSIVE TO DESSICATION 20); calcium ion binding 6.75
55 266900_at AT2G34610 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G30190.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAG12037.1) 5.79
56 266544_at AT2G35300 late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein 7.56
57 266098_at AT2G37870 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein 5.36
58 267008_at AT2G39350 ABC transporter family protein 4.12
59 267080_at AT2G41190 amino acid transporter family protein 5.22
60 267628_at AT2G42280 basic helix-loop-helix (bHLH) family protein -1.48
61 266327_at AT2G46680 ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7); transcription factor 5.10
62 266462_at AT2G47770 benzodiazepine receptor-related 6.26
63 266503_at AT2G47780 rubber elongation factor (REF) protein-related 5.35
64 259303_at AT3G05130 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68600.1); contains InterPro domain Prefoldin (InterPro:IPR009053) -1.70
65 258901_at AT3G05640 protein phosphatase 2C, putative / PP2C, putative 4.21
66 258535_at AT3G06750 hydroxyproline-rich glycoprotein family protein -1.98
67 258983_at AT3G08860 alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative 4.22
68 259231_at AT3G11410 AHG3/ATPP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA); protein binding / protein serine/threonine phosphatase 3.67
69 259282_at AT3G11430 ATGPAT5/GPAT5 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase/ organic anion transmembrane transporter 3.78
70 256285_at AT3G12510 similar to At3g12510-like protein [Boechera stricta] (GB:ABB89768.1); contains domain PTHR11945 (PTHR11945); contains domain PTHR11945:SF13 (PTHR11945:SF13) 4.53
71 256789_at AT3G13672 seven in absentia (SINA) family protein 4.15
72 258369_at AT3G14310 ATPME3 (Arabidopsis thaliana pectin methylesterase 3) -1.26
73 256547_at AT3G14840 leucine-rich repeat family protein / protein kinase family protein -1.83
74 258250_at AT3G15850 FAD5 (FATTY ACID DESATURASE 5); oxidoreductase -1.73
75 258347_at AT3G17520 late embryogenesis abundant domain-containing protein / LEA domain-containing protein 9.49
76 258006_at AT3G19400 cysteine proteinase, putative -1.30
77 255723_at AT3G29575 similar to TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2) [Arabidopsis thaliana] (TAIR:AT3G02140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49169.1); contains InterPro domain Protein of unknown function DUF1675 (InterPro:IPR012463) 5.25
78 252199_at AT3G50270 transferase family protein -1.48
79 252183_at AT3G50740 UGT72E1 (UDP-glucosyl transferase 72E1); UDP-glycosyltransferase/ coniferyl-alcohol glucosyltransferase/ transferase, transferring glycosyl groups -3.72
80 252102_at AT3G50970 LTI30 (LOW TEMPERATURE-INDUCED 30) 4.24
81 252034_at AT3G52040 similar to unnamed protein product [Vitis vinifera] (GB:CAO40759.1) -1.32
82 251725_at AT3G56260 unknown protein 4.26
83 251580_at AT3G58450 universal stress protein (USP) family protein 4.54
84 251272_at AT3G61890 ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 12); transcription factor 4.22
85 255521_at AT4G02280 SUS3; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups 5.98
86 255250_at AT4G05100 AtMYB74 (myb domain protein 74); DNA binding / transcription factor 4.00
87 254931_at AT4G11460 protein kinase family protein -3.33
88 254823_at AT4G12580 unknown protein 3.99
89 245265_at AT4G14400 ACD6 (ACCELERATED CELL DEATH 6); protein binding -2.71
90 245555_at AT4G15390 transferase family protein -2.29
91 245266_at AT4G17070 peptidyl-prolyl cis-trans isomerase -1.22
92 245362_at AT4G17460 HAT1 (homeobox-leucine zipper protein 1); DNA binding / transcription factor -4.08
93 245383_at AT4G17810 nucleic acid binding / transcription factor/ zinc ion binding -1.47
94 254705_at AT4G17870 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G46790.1); similar to Streptomyces cyclase/dehydrase family protein [Brassica oleracea] (GB:ABD65175.1); contains InterPro domain Streptomyces cyclase/dehydrase (InterPro:IPR005031) -1.95
95 254562_at AT4G19230 CYP707A1 (cytochrome P450, family 707, subfamily A, polypeptide 1); oxygen binding 3.87
96 254550_at AT4G19690 IRT1 (IRON-REGULATED TRANSPORTER 1); cadmium ion transmembrane transporter/ iron ion transmembrane transporter/ manganese ion transmembrane transporter/ zinc ion transmembrane transporter -4.05
97 254410_at AT4G21410 protein kinase family protein -2.19
98 253994_at AT4G26080 ABI1 (ABA INSENSITIVE 1); calcium ion binding / protein serine/threonine phosphatase 3.94
99 253872_at AT4G27410 RD26 (RESPONSIVE TO DESSICATION 26); transcription factor 4.62
100 253829_at AT4G28040 nodulin MtN21 family protein 4.10
101 253851_at AT4G28110 AtMYB41 (myb domain protein 41); DNA binding / transcription factor 3.93
102 253252_at AT4G34740 ATASE2 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2); amidophosphoribosyltransferase -1.78
103 253207_at AT4G34770 auxin-responsive family protein -5.53
104 253215_at AT4G34950 nodulin family protein -2.33
105 253043_at AT4G37540 LBD39 (LOB DOMAIN-CONTAINING PROTEIN 39) -1.35
106 252972_at AT4G38840 auxin-responsive protein, putative -1.59
107 252885_at AT4G39260 ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8); RNA binding -1.60
108 252908_at AT4G39670 glycolipid binding / glycolipid transporter 4.20
109 251084_at AT5G01520 zinc finger (C3HC4-type RING finger) family protein 4.12
110 245713_at AT5G04370 NAMT1; S-adenosylmethionine-dependent methyltransferase 6.51
111 250832_at AT5G04950 nicotianamine synthase, putative -3.08
112 250826_at AT5G05220 similar to hypothetical protein [Vitis vinifera] (GB:CAN82940.1) 4.56
113 250777_at AT5G05440 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48777.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916); contains InterPro domain Streptomyces cyclase/dehydrase (InterPro:IPR005031) -2.39
114 250679_at AT5G06550 Identical to F-box protein At5g06550 [Arabidopsis Thaliana] (GB:Q67XX3;GB:Q9FG15); similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G78280.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75104.1); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347) -1.24
115 250582_at AT5G07580 DNA binding / transcription factor -2.49
116 245904_at AT5G11110 ATSPS2F/SPS1 (SUCROSE PHOSPHATE SYNTHASE 1); sucrose-phosphate synthase 4.19
117 250287_at AT5G13330 RAP2.6L (related to AP2 6L); DNA binding / transcription factor 4.08
118 250217_at AT5G14120 nodulin family protein -2.36
119 250000_at AT5G18650 zinc finger (C3HC4-type RING finger) family protein -1.25
120 249923_at AT5G19120 aspartic-type endopeptidase/ pepsin A -2.18
121 245941_at AT5G19820 EMB2734 (EMBRYO DEFECTIVE 2734); lyase -1.26
122 246149_at AT5G19890 peroxidase, putative -1.69
123 246070_at AT5G20160 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -1.38
124 249867_at AT5G23020 IMS2/MAM-L/MAM3 (METHYLTHIOALKYMALATE SYNTHASE-LIKE); 2-isopropylmalate synthase/ methylthioalkylmalate synthase -2.26
125 249830_at AT5G23300 PYRD (PYRIMIDINE D); dihydroorotate dehydrogenase -1.28
126 245953_at AT5G28520 similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT1G33790.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) 6.99
127 249726_at AT5G35480 unknown protein -1.30
128 249686_at AT5G36140 CYP716A2 (cytochrome P450, family 716, subfamily A, polypeptide 2); heme binding / iron ion binding / monooxygenase -2.27
129 249614_at AT5G37300 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38995.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48523.1); contains InterPro domain Protein of unknown function UPF0089 (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298 (InterPro:IPR009721) 3.92
130 249454_at AT5G39520 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15021.1) 4.93
131 249364_at AT5G40590 DC1 domain-containing protein -2.27
132 249325_at AT5G40850 UPM1 (UROPHORPHYRIN METHYLASE 1); uroporphyrin-III C-methyltransferase -1.70
133 249032_at AT5G44910 Toll-Interleukin-Resistance (TIR) domain-containing protein -2.02
134 248959_at AT5G45630 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18980.1); similar to unknown [Cucumis sativus] (GB:ABY56081.1); similar to unknown [Cucumis melo] (GB:ABQ53634.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) 3.78
135 248915_at AT5G45690 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47983.1); contains InterPro domain Protein of unknown function DUF1264 (InterPro:IPR010686) 4.78
136 248865_at AT5G46790 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17870.1); similar to Streptomyces cyclase/dehydrase family protein [Brassica oleracea] (GB:ABD65631.1); contains InterPro domain Streptomyces cyclase/dehydrase (InterPro:IPR005031) -1.22
137 248794_at AT5G47220 ATERF-2/ATERF2/ERF2 (ETHYLENE RESPONSE FACTOR 2); DNA binding / transcription activator/ transcription factor -2.41
138 248729_at AT5G48010 pentacyclic triterpene synthase, putative -1.55
139 248352_at AT5G52300 LTI65/RD29B (RESPONSIVE TO DESSICATION 29B) 7.48
140 248337_at AT5G52310 COR78 (COLD REGULATED 78) 5.04
141 248302_at AT5G53160 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69376.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64668.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916) -1.93
142 247942_at AT5G57120 similar to unnamed protein product [Vitis vinifera] (GB:CAO69558.1); contains InterPro domain SRP40, C-terminal (InterPro:IPR007718); contains InterPro domain LisH dimerisation motif (InterPro:IPR006594) -1.36
143 247880_at AT5G57780 transcription regulator -1.66
144 247754_at AT5G59080 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15731.1) -1.58
145 247723_at AT5G59220 protein phosphatase 2C, putative / PP2C, putative 5.83
146 247718_at AT5G59310 LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding 8.53
147 247717_at AT5G59320 LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding 4.74
148 247573_at AT5G61160 AACT1 (ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 1); transferase -3.45
149 247549_at AT5G61420 MYB28 (MYB DOMAIN PROTEIN 28); DNA binding / transcription factor -2.12
150 247437_at AT5G62490 ATHVA22B (Arabidopsis thaliana HVA22 homologue B) 6.89
151 247383_at AT5G63410 leucine-rich repeat transmembrane protein kinase, putative -1.27
152 247095_at AT5G66400 RAB18 (RESPONSIVE TO ABA 18) 5.89
153 247024_at AT5G66985 unknown protein -2.34
154 246986_at AT5G67280 RLK (RECEPTOR-LIKE KINASE); ATP binding / kinase/ protein serine/threonine kinase -1.36