marker gene list
Imbibed 24 h ABA 30uM (seed)
Mutant phyB (Dark)
・・・up requlated genes
・・・down regulated genes
probeID AGICode Annotation gene
expression
1 265094_at AT1G03890 cupin family protein 1.20
2 261080_at AT1G07370 PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN); DNA binding / DNA polymerase processivity factor -0.81
3 261197_at AT1G12900 GAPA-2; glyceraldehyde-3-phosphate dehydrogenase -1.18
4 262829_at AT1G14970 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01480.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77011.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42288.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) -0.88
5 255761_at AT1G16770 similar to unnamed protein product [Vitis vinifera] (GB:CAO41707.1) 2.17
6 262414_at AT1G49430 LACS2 (LONG-CHAIN ACYL-COA SYNTHETASE 2) -0.85
7 261957_at AT1G64660 ATMGL; catalytic/ methionine gamma-lyase 1.31
8 264213_at AT1G65390 ATPP2-A5; carbohydrate binding -0.97
9 262290_at AT1G70985 hydroxyproline-rich glycoprotein family protein 1.99
10 262177_at AT1G74710 ICS1 (ISOCHORISMATE SYNTHASEI); isochorismate synthase -0.77
11 262176_at AT1G74960 FAB1 (FATTY ACID BIOSYNTHESIS 1); fatty-acid synthase -0.78
12 260797_at AT1G78390 NCED9 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9) 1.44
13 267321_at AT2G19320 unknown protein 2.81
14 266166_at AT2G28080 glycosyltransferase family protein -0.80
15 267154_at AT2G30870 ATGSTF10 (EARLY DEHYDRATION-INDUCED 13); glutathione transferase -0.87
16 267461_at AT2G33830 dormancy/auxin associated family protein 1.60
17 266636_at AT2G35370 GDCH (Glycine decarboxylase complex H) -0.78
18 267534_at AT2G41900 zinc finger (CCCH-type) family protein -0.80
19 267393_at AT2G44500 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15104.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) -0.88
20 258911_at AT3G06470 GNS1/SUR4 membrane family protein -1.16
21 256772_at AT3G13750 BGAL1 (BETA GALACTOSIDASE 1); beta-galactosidase -0.78
22 256774_at AT3G13760 DC1 domain-containing protein -0.98
23 258347_at AT3G17520 late embryogenesis abundant domain-containing protein / LEA domain-containing protein 1.17
24 256827_at AT3G18570 glycine-rich protein / oleosin 2.28
25 257204_at AT3G23805 RALFL24 (RALF-LIKE 24) -0.87
26 258240_at AT3G27660 OLEO4 (OLEOSIN4) 1.39
27 252347_at AT3G48130 ribosomal protein L13 homolog -1.32
28 255602_at AT4G01026 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G01360.1); similar to hypothetical protein [Arabidopsis suecica] (GB:BAF63139.1); contains domain SSF55961 (SSF55961) 1.13
29 255550_at AT4G01970 ATSTS (ARABIDOPSIS THALIANA STACHYOSE SYNTHASE); galactinol-raffinose galactosyltransferase/ hydrolase, hydrolyzing O-glycosyl compounds 1.69
30 255048_at AT4G09600 GASA3 (GAST1 PROTEIN HOMOLOG 3) 1.76
31 255049_at AT4G09610 GASA2 (GAST1 PROTEIN HOMOLOG 2) 2.85
32 245485_at AT4G16230 GDSL-motif lipase/hydrolase family protein -1.45
33 254580_at AT4G19390 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63752.1); contains InterPro domain Uncharacterised conserved protein UCP022348 (InterPro:IPR016804); contains InterPro domain Protein of unknown function UPF0114 (InterPro:IPR005134) 1.31
34 253238_at AT4G34480 glycosyl hydrolase family 17 protein 1.11
35 253206_at AT4G34640 SQS1 (SQUALENE SYNTHASE 1); farnesyl-diphosphate farnesyltransferase -0.98
36 250624_at AT5G07330 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G63060.1); similar to unknown [Xerophyta humilis] (GB:AAT45004.1) 1.11
37 250503_at AT5G09820 plastid-lipid associated protein PAP / fibrillin family protein -1.45
38 245981_at AT5G13100 oxidoreductase -1.00
39 249123_at AT5G43760 beta-ketoacyl-CoA synthase, putative -0.96
40 248912_at AT5G45670 GDSL-motif lipase/hydrolase family protein -0.81
41 248915_at AT5G45690 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47983.1); contains InterPro domain Protein of unknown function DUF1264 (InterPro:IPR010686) 2.23
42 248186_at AT5G53880 similar to unknown [Populus trichocarpa] (GB:ABK92577.1) -1.36
43 248188_at AT5G54070 AT-HSFA9 (ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A9); DNA binding / transcription factor 3.85
44 248200_at AT5G54160 ATOMT1 (O-METHYLTRANSFERASE 1) -1.05
45 248096_at AT5G55240 caleosin-related family protein / embryo-specific protein, putative 1.84
46 247435_at AT5G62480 ATGSTU9 (GLUTATHIONE S-TRANSFERASE TAU 9); glutathione transferase 1.50
47 247172_at AT5G65550 UDP-glucoronosyl/UDP-glucosyl transferase family protein 1.66
48 247096_at AT5G66430 S-adenosyl-L-methionine:carboxyl methyltransferase family protein 1.77
49 245024_at ATCG00120 Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast. 1.32
50 245026_at ATCG00140 ATPase III subunit 1.71
51 244973_at ATCG00690 Encodes photosystem II 5 kD protein subunit PSII-T. This is a plastid-encoded gene (PsbTc) which also has a nuclear-encoded paralog (PsbTn). 2.13