marker gene list
Dark 44min pls RedLigh 1min
Dark 4 h pls UV-AB 5min
・・・up requlated genes
・・・down regulated genes
probeID AGICode Annotation gene
expression
1 260819_at AT1G06850 ATBZIP52 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 52); DNA binding / transcription factor -0.91
2 263207_at AT1G10550 XTH33 (xyloglucan:xyloglucosyl transferase 33); hydrolase, acting on glycosyl bonds -0.95
3 262850_at AT1G14920 GAI (GA INSENSITIVE); transcription factor -0.91
4 261663_at AT1G18330 EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1); DNA binding / transcription factor 2.27
5 263151_at AT1G54120 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45609.1) -1.32
6 263738_at AT1G60060 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53900.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40921.1); contains domain PTHR13902:SF3 (PTHR13902:SF3); contains domain PTHR13902 (PTHR13902) -1.03
7 260167_at AT1G71970 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22680.1); similar to unknown [Populus trichocarpa] (GB:ABK94498.1) -1.06
8 266745_at AT2G02950 PKS1 (PHYTOCHROME KINASE SUBSTRATE 1) 2.31
9 263796_at AT2G24540 AFR (ATTENUATED FAR-RED RESPONSE) 2.01
10 267516_at AT2G30520 RPT2 (ROOT PHOTOTROPISM 2); protein binding 2.36
11 267517_at AT2G30520 RPT2 (ROOT PHOTOTROPISM 2); protein binding 2.72
12 263252_at AT2G31380 STH (salt tolerance homologue); transcription factor/ zinc ion binding 1.79
13 263963_at AT2G36080 DNA-binding protein, putative 1.75
14 267364_at AT2G40080 ELF4 (EARLY FLOWERING 4) 1.61
15 265245_at AT2G43060 transcription factor -0.95
16 263779_at AT2G46340 SPA1 (SUPPRESSOR OF PHYA-105 1); signal transducer 2.28
17 258497_at AT3G02380 COL2 (CONSTANS-LIKE 2); transcription factor/ zinc ion binding 1.87
18 258609_at AT3G02910 Identical to UPF0131 protein At3g02910 [Arabidopsis Thaliana] (GB:Q9M8T3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G46720.1); similar to Os03g0854000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051934.1); similar to unknown [Picea sitchensis] (GB:ABK22133.1); contains InterPro domain Butirosin biosynthesis, BtrG-like (InterPro:IPR013024); contains InterPro domain Protein of unknown function UPF0131 (InterPro:IPR005347) 2.24
19 258742_at AT3G05800 transcription factor 1.89
20 256266_at AT3G12320 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75675.1) 2.21
21 256245_at AT3G12580 HSP70 (heat shock protein 70); ATP binding 1.76
22 257858_at AT3G12920 protein binding / zinc ion binding -1.10
23 256999_at AT3G14200 DNAJ heat shock N-terminal domain-containing protein 1.80
24 257262_at AT3G21890 zinc finger (B-box type) family protein 2.32
25 258325_at AT3G22830 AT-HSFA6B (Arabidopsis thaliana heat shock transcription factor A6B); DNA binding / transcription factor 2.30
26 258321_at AT3G22840 ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN); chlorophyll binding 2.10
27 258133_at AT3G24500 ATMBF1C/MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C); DNA binding / transcription coactivator/ transcription factor 1.88
28 256571_at AT3G30730 contains domain HELICASE-RELATED (PTHR10492) -0.89
29 252429_at AT3G47500 CDF3 (CYCLING DOF FACTOR 3); DNA binding / protein binding / transcription factor 1.91
30 252118_at AT3G51400 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23715.1); contains InterPro domain Protein of unknown function DUF241, plant (InterPro:IPR004320) -0.88
31 251374_at AT3G60390 HAT3 (homeobox-leucine zipper protein 3); transcription factor -1.06
32 255064_at AT4G08950 phosphate-responsive protein, putative (EXO) -1.60
33 254685_at AT4G13790 auxin-responsive protein, putative -1.71
34 245328_at AT4G14465 DNA-binding protein-related -1.16
35 245439_at AT4G16670 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39969.1); contains InterPro domain Pleckstrin-like, plant (InterPro:IPR013666); contains InterPro domain Protein of unknown function DUF828, plant (InterPro:IPR008546); contains InterPro domain Pleckstrin-like (InterPro:IPR001849) -1.35
36 245276_at AT4G16780 ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2); DNA binding / transcription factor -3.75
37 245362_at AT4G17460 HAT1 (homeobox-leucine zipper protein 1); DNA binding / transcription factor -0.92
38 254356_at AT4G22190 similar to unknown [Populus trichocarpa] (GB:ABK94177.1) -0.92
39 254066_at AT4G25480 DREB1A (DEHYDRATION RESPONSE ELEMENT B1A); DNA binding / transcription activator/ transcription factor 2.18
40 253423_at AT4G32280 IAA29 (indoleacetic acid-induced protein 29); transcription factor -1.75
41 253155_at AT4G35720 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23717.1); contains InterPro domain Protein of unknown function DUF241, plant (InterPro:IPR004320) -1.19
42 253104_at AT4G36010 pathogenesis-related thaumatin family protein -1.59
43 253103_at AT4G36110 auxin-responsive protein, putative -0.88
44 251072_at AT5G01740 similar to SAG20 (WOUND-INDUCED PROTEIN 12) [Arabidopsis thaliana] (TAIR:AT3G10985.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48816.1); contains InterPro domain Wound-induced protein, Wun1 (InterPro:IPR009798) -1.03
45 251058_at AT5G01790 unknown protein -1.24
46 251020_at AT5G02270 ATNAP9 (Non-intrinsic ABC protein 9) 2.51
47 251012_at AT5G02580 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55240.1); similar to hypothetical protein OsI_019565 [Oryza sativa (indica cultivar-group)] (GB:EAY98332.1); similar to Os05g0462000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055765.1); contains InterPro domain Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476) -1.84
48 250665_at AT5G06980 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12320.1) 1.72
49 250420_at AT5G11260 HY5 (ELONGATED HYPOCOTYL 5); DNA binding / transcription factor 2.66
50 250012_x_at AT5G18060 auxin-responsive protein, putative -1.26
51 249769_at AT5G24120 SIGE (RNA polymerase sigma subunit E); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor 1.81
52 249741_at AT5G24470 APRR5 (PSEUDO-RESPONSE REGULATOR 5); transcription regulator 2.29
53 246966_at AT5G24850 CRY3 (CRYPTOCHROME 3); DNA binding / DNA photolyase/ FMN binding 1.64
54 249383_at AT5G39860 PRE1 (PACLOBUTRAZOL RESISTANCE1); DNA binding / transcription factor -0.99
55 249063_at AT5G44110 POP1 2.98
56 249035_at AT5G44190 GLK2 (GOLDEN2-LIKE 2); DNA binding / transcription factor 1.89
57 249065_at AT5G44260 zinc finger (CCCH-type) family protein -1.24
58 248347_at AT5G52250 transducin family protein / WD-40 repeat family protein 1.59
59 248213_at AT5G53660 AtGRF7 (GROWTH-REGULATING FACTOR 7) -1.13
60 248208_at AT5G53980 ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52); transcription factor -1.41
61 247878_at AT5G57760 unknown protein -1.39
62 247323_at AT5G64170 dentin sialophosphoprotein-related 4.17