marker gene list
Mutant gh3.5-1D
Petiol (leaf7)
・・・up requlated genes
・・・down regulated genes
probeID AGICode Annotation gene
expression
1 265042_at AT1G04040 acid phosphatase class B family protein -3.26
2 263664_at AT1G04250 AXR3 (AUXIN RESISTANT 3); transcription factor -2.21
3 260831_at AT1G06830 glutaredoxin family protein -3.44
4 264517_at AT1G10120 DNA binding / transcription factor 1.30
5 262784_at AT1G10760 SEX1 (STARCH EXCESS 1) 1.55
6 259514_at AT1G12480 CDI3/OZS1/RCD3/SLAC1 (SLOW ANION CHANNEL-ASSOCIATED 1); transporter 1.61
7 261203_at AT1G12845 similar to hypothetical protein MtrDRAFT_AC149131g9v2 [Medicago truncatula] (GB:ABD32556.1) 1.33
8 259385_at AT1G13470 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42040.1); contains InterPro domain Protein of unknown function DUF1262 (InterPro:IPR010683) -1.88
9 261766_at AT1G15580 IAA5 (indoleacetic acid-induced protein 5); transcription factor -4.13
10 259401_at AT1G17760 ATCSTF77/CSTF77 (Cleavage stimulation factor 77); protein binding 1.09
11 261668_at AT1G18500 IPMS1/MAML-4 (METHYLTHIOALKYLMALATE SYNTHASE-LIKE 4); 2-isopropylmalate synthase 1.17
12 261428_at AT1G18870 ICS2; isochorismate synthase 1.49
13 255781_at AT1G19880 regulator of chromosome condensation (RCC1) family protein 3.07
14 261221_at AT1G19960 similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT2G32140.1) -2.38
15 259516_at AT1G20450 ERD10/LTI45 (EARLY RESPONSIVE TO DEHYDRATION 10) 1.44
16 264858_at AT1G24190 ATSIN3/SIN3 (Arabidopsis thaliana sin3 homolog) 1.15
17 245649_at AT1G24706 similar to putative THO complex 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD87730.1); similar to hypothetical protein OsI_004810 [Oryza sativa (indica cultivar-group)] (GB:EAY76963.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ69221.1); contains domain THO2 PROTEIN (PTHR21597) 1.43
18 264987_at AT1G27030 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27020.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05517.1); similar to Os10g0463800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064789.1) 1.57
19 257506_at AT1G29440 auxin-responsive family protein -3.41
20 259784_at AT1G29450 auxin-responsive protein, putative -3.72
21 259787_at AT1G29460 auxin-responsive protein, putative -2.85
22 259783_at AT1G29510 SAUR68 (SMALL AUXIN UPREGULATED 68) -3.06
23 246603_at AT1G31690 copper ion binding 1.39
24 261981_at AT1G33811 GDSL-motif lipase/hydrolase family protein 1.17
25 260719_at AT1G48090 C2 domain-containing protein 1.54
26 262464_at AT1G50280 phototropic-responsive NPH3 family protein 1.20
27 259661_at AT1G55265 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19860.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64354.1); contains InterPro domain Protein of unknown function DUF538 (InterPro:IPR007493) -2.07
28 262098_at AT1G56170 HAP5B (Heme activator protein (yeast) homolog 5B); DNA binding / transcription factor 1.31
29 256021_at AT1G58270 ZW9 2.30
30 262902_x_at AT1G59930 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G59920.1); similar to putative MADS-box transcription factor [Arabidopsis lyrata] (GB:AAO42467.1); contains domain PTHR11945 (PTHR11945); contains domain PTHR11945:SF14 (PTHR11945:SF14) -2.39
31 264217_at AT1G60190 armadillo/beta-catenin repeat family protein / U-box domain-containing protein 1.33
32 260629_at AT1G62330 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G11990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22725.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) 1.09
33 259766_at AT1G64360 unknown protein -2.10
34 264636_at AT1G65490 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65486.1) -2.23
35 257516_at AT1G69040 ACR4 (ACT REPEAT 4); amino acid binding 1.09
36 262312_at AT1G70830 MLP28 (MLP-LIKE PROTEIN 28) -1.92
37 259756_at AT1G71080 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G38050.1); similar to unknown [Populus trichocarpa] (GB:ABK95382.1); contains domain PTHR15970:SF2 (PTHR15970:SF2); contains domain PTHR15970 (PTHR15970) 1.13
38 260250_at AT1G74260 catalytic 1.28
39 259925_at AT1G75040 PR5 (PATHOGENESIS-RELATED GENE 5) -2.04
40 262947_at AT1G75750 GASA1 (GAST1 PROTEIN HOMOLOG 1) -3.39
41 259971_at AT1G76580 transcription factor 1.62
42 260058_at AT1G78100 F-box family protein -1.81
43 261881_at AT1G80760 NIP6;1 (NOD26-like intrinsic protein 6;1); water channel -1.78
44 263406_at AT2G04160 AIR3 (Auxin-Induced in Root cultures 3); subtilase 1.81
45 266215_at AT2G06850 EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE); hydrolase, acting on glycosyl bonds -2.59
46 265837_at AT2G14560 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G33840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48825.1); contains InterPro domain Protein of unknown function DUF567 (InterPro:IPR007612) -3.09
47 264787_at AT2G17840 ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7) 1.47
48 263871_at AT2G22010 zinc finger (C3HC4-type RING finger) family protein 1.24
49 263433_at AT2G22240 inositol-3-phosphate synthase isozyme 2 / myo-inositol-1-phosphate synthase 2 / MI-1-P synthase 2 / IPS 2 1.16
50 263586_at AT2G25350 phox (PX) domain-containing protein 1.22
51 266805_at AT2G30010 similar to PMR5 (POWDERY MILDEW RESISTANT 5) [Arabidopsis thaliana] (TAIR:AT5G58600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21434.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) -1.80
52 267116_at AT2G32560 F-box family protein -2.06
53 263912_at AT2G36390 SBE2.1 (STARCH BRANCHING ENZYME 2.1); 1,4-alpha-glucan branching enzyme 1.17
54 265722_at AT2G40100 LHCB4.3 (LIGHT HARVESTING COMPLEX PSII); chlorophyll binding -2.59
55 266395_at AT2G43100 aconitase C-terminal domain-containing protein -2.10
56 267501_at AT2G45540 WD-40 repeat family protein / beige-related 1.41
57 259332_at AT3G03830 auxin-responsive protein, putative -3.88
58 259331_at AT3G03840 auxin-responsive protein, putative -3.31
59 258791_at AT3G04720 PR4 (PATHOGENESIS-RELATED 4) -3.75
60 258844_at AT3G04740 SWP (STRUWWELPETER) 1.13
61 258901_at AT3G05640 protein phosphatase 2C, putative / PP2C, putative 1.10
62 259010_at AT3G07340 basic helix-loop-helix (bHLH) family protein -1.81
63 256446_at AT3G11110 zinc finger (C3HC4-type RING finger) family protein -1.87
64 258756_at AT3G11960 cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein 1.09
65 256783_at AT3G13670 protein kinase family protein 1.19
66 258349_at AT3G17609 HYH (HY5-HOMOLOG); DNA binding / transcription factor -1.83
67 258159_at AT3G17840 RLK902 (receptor-like kinase 902); ATP binding / kinase/ protein serine/threonine kinase 1.19
68 257122_at AT3G20250 APUM5 (ARABIDOPSIS PUMILIO 5); RNA binding 1.17
69 256766_at AT3G22231 PCC1 (PATHOGEN AND CIRCADIAN CONTROLLED 1) -3.21
70 256617_at AT3G22240 unknown protein -3.30
71 257766_at AT3G23030 IAA2 (indoleacetic acid-induced protein 2); transcription factor -2.53
72 257769_at AT3G23050 IAA7 (AUXIN RESISTANT 2); transcription factor -2.45
73 257793_at AT3G26960 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49052.1) -2.55
74 257146_at AT3G27260 GTE8 (GLOBAL TRANSCRIPTION FACTOR GROUP E8); DNA binding 1.27
75 256746_at AT3G29320 glucan phosphorylase, putative 1.57
76 252612_at AT3G45160 contains domain PROKAR_LIPOPROTEIN (PS51257) -3.58
77 252549_at AT3G45860 receptor-like protein kinase, putative -1.79
78 252501_at AT3G46880 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59080.1) -1.88
79 252443_at AT3G46960 ATP-dependent helicase 1.28
80 252415_at AT3G47340 ASN1 (DARK INDUCIBLE 6) 2.37
81 252269_at AT3G49580 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49570.1); similar to unknown protein [Brassica rapa subsp. pekinensis] (GB:AAQ92331.1) -1.73
82 252220_at AT3G49940 LBD38 (LOB DOMAIN-CONTAINING PROTEIN 38) -2.27
83 251640_at AT3G57450 similar to unnamed protein product [Vitis vinifera] (GB:CAO40798.1) -1.93
84 251227_at AT3G62700 ATMRP10 (Arabidopsis thaliana multidrug resistance-associated protein 10) 1.11
85 255694_at AT4G00050 UNE10 (unfertilized embryo sac 10); DNA binding / transcription factor -2.12
86 255625_at AT4G01120 GBF2 (G-BOX BINDING FACTOR 2); DNA binding / transcription factor 1.10
87 255127_at AT4G08300 nodulin MtN21 family protein -3.22
88 255128_at AT4G08310 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G44780.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61850.1) 1.18
89 245397_at AT4G14560 IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE); transcription factor -2.91
90 245505_at AT4G15690 glutaredoxin family protein -2.56
91 245362_at AT4G17460 HAT1 (homeobox-leucine zipper protein 1); DNA binding / transcription factor -2.29
92 254621_at AT4G18600 WAVE5 (WASP (WISKOTT-ALDRICH SYNDROME PROTEIN)-FAMILY VERPROLIN HOMOLOGOUS PROTEIN 5) 1.18
93 254643_at AT4G18820 ATP binding / DNA binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide binding 1.18
94 254595_at AT4G18960 AG (AGAMOUS); transcription factor 1.18
95 254323_at AT4G22620 auxin-responsive family protein -1.88
96 254041_at AT4G25830 integral membrane family protein -1.90
97 253908_at AT4G27260 GH3.5/WES1; indole-3-acetic acid amido synthetase 8.12
98 253871_at AT4G27440 PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B); oxidoreductase/ protochlorophyllide reductase 1.49
99 253815_at AT4G28250 ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3) 1.56
100 253754_at AT4G29020 glycine-rich protein 1.68
101 253758_at AT4G29060 EMB2726 (EMBRYO DEFECTIVE 2726); translation elongation factor 1.43
102 253263_at AT4G34000 ABF3/DPBF5 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / protein binding / transcription activator/ transcription factor 1.44
103 253255_at AT4G34760 auxin-responsive family protein -2.69
104 246200_at AT4G37240 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G23690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45438.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61825.1) -2.93
105 253066_at AT4G37770 ACS8 (1-Amino-cyclopropane-1-carboxylate synthase 8) 1.49
106 252970_at AT4G38850 SAUR_AC1 (SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA) -3.16
107 252965_at AT4G38860 auxin-responsive protein, putative -2.58
108 251013_at AT5G02540 short-chain dehydrogenase/reductase (SDR) family protein 1.88
109 250971_at AT5G02810 PRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator 1.25
110 250832_at AT5G04950 nicotianamine synthase, putative -2.26
111 250764_at AT5G05960 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein -3.47
112 250662_at AT5G07010 sulfotransferase family protein 4.04
113 250520_at AT5G08470 PEX1 (PEROXISOME 1); ATPase 1.58
114 245891_at AT5G09220 AAP2 (AMINO ACID PERMEASE 2); amino acid transmembrane transporter -2.34
115 246522_at AT5G15830 ATBZIP3 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 3); DNA binding / transcription factor -3.00
116 250012_x_at AT5G18060 auxin-responsive protein, putative -2.58
117 246076_at AT5G20280 ATSPS1F (SUCROSE PHOSPHATE SYNTHASE 1F); sucrose-phosphate synthase/ transferase, transferring glycosyl groups 1.24
118 249894_at AT5G22580 Identical to Uncharacterized protein At5g22580 [Arabidopsis Thaliana] (GB:Q9FK81); similar to stable protein 1-related [Arabidopsis thaliana] (TAIR:AT3G17210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68720.1); contains InterPro domain Dimeric alpha-beta barrel (InterPro:IPR011008); contains InterPro domain Stress responsive alpha-beta barrel (InterPro:IPR013097) -3.00
119 246919_at AT5G25460 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11420.1); similar to unknown [Ricinus communis] (GB:CAB02653.1); contains InterPro domain Protein of unknown function DUF642 (InterPro:IPR006946) -1.90
120 246829_at AT5G26570 PWD (PHOSPHOGLUCAN WATER DIKINASE); catalytic 1.40
121 249383_at AT5G39860 PRE1 (PACLOBUTRAZOL RESISTANCE1); DNA binding / transcription factor -2.38
122 249354_at AT5G40480 EMB3012 (EMBRYO DEFECTIVE 3012) 1.29
123 249073_at AT5G44020 acid phosphatase class B family protein -1.80
124 249086_at AT5G44180 homeobox transcription factor, putative 1.48
125 249046_at AT5G44400 FAD-binding domain-containing protein 1.40
126 248945_at AT5G45510 leucine-rich repeat family protein 1.43
127 248888_at AT5G46240 KAT1 (K+ ATPASE 1); cyclic nucleotide binding / inward rectifier potassium channel 1.87
128 248801_at AT5G47370 HAT2; transcription factor -2.62
129 248686_at AT5G48540 33 kDa secretory protein-related -1.97
130 248427_at AT5G51750 ATSBT1.3; subtilase 1.49
131 248337_at AT5G52310 COR78 (COLD REGULATED 78) 2.72
132 248327_at AT5G52750 heavy-metal-associated domain-containing protein -2.16
133 248246_at AT5G53200 TRY (TRIPTYCHON); DNA binding / transcription factor -1.87
134 248237_at AT5G53890 leucine-rich repeat transmembrane protein kinase, putative 1.11
135 248190_at AT5G54130 calcium-binding EF hand family protein -2.02
136 247800_at AT5G58570 unknown protein -3.07
137 247723_at AT5G59220 protein phosphatase 2C, putative / PP2C, putative 2.19
138 247500_at AT5G61910 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68695.1); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Development and cell death (InterPro:IPR013989); contains InterPro domain Protein of unknown function GLTT (InterPro:IPR008165) 1.49
139 247465_at AT5G62190 PRH75 (plant RNA helicase 75); ATP-dependent helicase 1.46
140 247252_at AT5G64770 similar to 80C09_10 [Brassica rapa subsp. pekinensis] (GB:AAZ41821.1) -3.42
141 247255_at AT5G64780 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G09830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71731.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64859.1); contains InterPro domain Uncharacterised conserved protein UCP009193 (InterPro:IPR016549) -2.97
142 247074_at AT5G66590 allergen V5/Tpx-1-related family protein -1.92