marker gene list
Mutant nph4-1
Mutant bri1
･･･up requlated genes
･･･down regulated genes
probeID AGICode Annotation gene
expression
1 261576_at AT1G01070 nodulin MtN21 family protein 0.75
2 264395_at AT1G12070 Rho GDP-dissociation inhibitor family protein -1.06
3 255941_at AT1G20350 ATTIM17-1 (Arabidopsis thaliana translocase inner membrane subunit 17-1); P-P-bond-hydrolysis-driven protein transmembrane transporter -1.58
4 260856_at AT1G21910 AP2 domain-containing transcription factor family protein -1.05
5 259783_at AT1G29510 SAUR68 (SMALL AUXIN UPREGULATED 68) -0.93
6 260024_at AT1G30080 glycosyl hydrolase family 17 protein 1.35
7 260760_at AT1G49170 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63440.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63440.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN83055.1); contains InterPro domain Protein of unknown function DUF167 (InterPro:IPR003746) -0.86
8 265053_at AT1G52000 jacalin lectin family protein 1.04
9 259962_at AT1G53690 DNA-directed RNA polymerases I, II, and III 7 kDa subunit, putative -1.22
10 262643_at AT1G62770 invertase/pectin methylesterase inhibitor family protein -0.97
11 259751_at AT1G71030 ATMYBL2 (Arabidopsis myb-like 2); DNA binding / transcription factor -1.06
12 259852_at AT1G72280 AERO1 (ARABIDOPSIS ENDOPLASMIC RETICULUM OXIDOREDUCTINS 1); FAD binding / electron carrier/ oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / protein binding -1.12
13 265588_at AT2G19970 pathogenesis-related protein, putative -1.12
14 265586_at AT2G19990 PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE) -1.71
15 263998_at AT2G22510 hydroxyproline-rich glycoprotein family protein 1.28
16 266828_at AT2G22930 glycosyltransferase family protein 0.69
17 266578_at AT2G23910 cinnamoyl-CoA reductase-related 0.91
18 266656_at AT2G25900 ATCTH (Arabidopsis thaliana Cys3His zinc finger protein); transcription factor -0.97
19 267605_at AT2G32920 ATPDIL2-3 (PDI-LIKE 2-3); protein disulfide isomerase 0.69
20 266097_at AT2G37970 SOUL-1; binding -0.85
21 266989_at AT2G39330 jacalin lectin family protein 1.32
22 267364_at AT2G40080 ELF4 (EARLY FLOWERING 4) 0.81
23 266424_at AT2G41330 glutaredoxin family protein 0.70
24 263981_at AT2G42870 HLH1/PAR1 (PHY RAPIDLY REGULATED 1); transcription regulator -0.96
25 260557_at AT2G43610 glycoside hydrolase family 19 protein -0.84
26 267502_at AT2G45550 CYP76C4 (cytochrome P450, family 76, subfamily C, polypeptide 4); oxygen binding 1.05
27 259275_at AT3G01060 similar to unnamed protein product [Vitis vinifera] (GB:CAO15045.1); similar to unknown [Brassica rapa] (GB:ABC41272.1) -1.03
28 259163_at AT3G01490 protein kinase, putative -1.30
29 258893_at AT3G05660 kinase/ protein binding 1.36
30 259015_at AT3G07350 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G25240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38687.1); contains InterPro domain Protein of unknown function DUF506, plant (InterPro:IPR006502) -1.22
31 259244_at AT3G07650 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding 1.63
32 258983_at AT3G08860 alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative 1.12
33 258723_at AT3G09600 myb family transcription factor -0.90
34 258764_at AT3G10720 pectinesterase, putative -1.01
35 256244_at AT3G12520 SULTR4;2 (sulfate transporter 4;2); sulfate transmembrane transporter 0.78
36 258402_at AT3G15450 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27450.1); similar to unknown [Populus trichocarpa] (GB:ABK93866.1); contains domain PTHR11772 (PTHR11772); contains domain G3DSA:3.60.20.10 (G3DSA:3.60.20.10); contains domain SSF56235 (SSF56235) -1.25
37 258225_at AT3G15630 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G52720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46032.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71657.1) -0.80
38 258239_at AT3G27690 LHCB2:4 (Photosystem II light harvesting complex gene 2.3); chlorophyll binding -0.87
39 256940_at AT3G30720 unknown protein 2.09
40 252488_at AT3G46700 UDP-glycosyltransferase/ transferase, transferring glycosyl groups 1.02
41 252490_at AT3G46720 UDP-glucoronosyl/UDP-glucosyl transferase family protein 0.92
42 251491_at AT3G59480 pfkB-type carbohydrate kinase family protein -1.16
43 255333_at AT4G04410 transposable element gene 3.03
44 245275_at AT4G15210 ATBETA-AMY (BETA-AMYLASE); beta-amylase 1.49
45 245341_at AT4G16447 unknown protein 0.72
46 254609_at AT4G18970 GDSL-motif lipase/hydrolase family protein -1.38
47 253720_at AT4G29270 acid phosphatase class B family protein 0.86
48 253697_at AT4G29700 type I phosphodiesterase/nucleotide pyrophosphatase family protein 0.77
49 253660_at AT4G30140 GDSL-motif lipase/hydrolase family protein -1.41
50 253627_at AT4G30650 hydrophobic protein, putative / low temperature and salt responsive protein, putative 1.20
51 253411_at AT4G32980 ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1); transcription factor 0.83
52 253207_at AT4G34770 auxin-responsive family protein -1.53
53 253197_at AT4G35250 vestitone reductase-related -0.88
54 253132_at AT4G35580 no apical meristem (NAM) family protein 1.18
55 252864_at AT4G39740 electron transport SCO1/SenC family protein -0.79
56 250920_at AT5G03390 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68960.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) -0.88
57 250768_at AT5G05670 signal recognition particle binding -0.83
58 250665_at AT5G06980 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12320.1) -1.01
59 250549_at AT5G07860 transferase family protein 0.72
60 245889_at AT5G09480 hydroxyproline-rich glycoprotein family protein 0.69
61 250500_at AT5G09530 hydroxyproline-rich glycoprotein family protein 0.93
62 245181_at AT5G12420 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48523.1); contains InterPro domain Protein of unknown function UPF0089 (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298 (InterPro:IPR009721) 0.81
63 245971_at AT5G20730 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); transcription factor -3.26
64 249881_at AT5G23190 CYP86B1 (cytochrome P450, family 86, subfamily B, polypeptide 1); oxygen binding 1.07
65 246932_at AT5G25190 ethylene-responsive element-binding protein, putative -1.96
66 246919_at AT5G25460 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11420.1); similar to unknown [Ricinus communis] (GB:CAB02653.1); contains InterPro domain Protein of unknown function DUF642 (InterPro:IPR006946) -1.49
67 249320_at AT5G40910 disease resistance protein (TIR-NBS-LRR class), putative 0.82
68 249295_at AT5G41280 Identical to Cysteine-rich repeat secretory protein 57 precursor (CRRSP57) [Arabidopsis Thaliana] (GB:Q9FHD5;GB:Q5BPI3); similar to receptor-like protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G41290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15206.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62393.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902) 0.74
69 249202_at AT5G42580 CYP705A12 (cytochrome P450, family 705, subfamily A, polypeptide 12); oxygen binding 1.25
70 249205_at AT5G42600 MRN (MARNERAL SYNTHASE); catalytic 1.03
71 249174_at AT5G42900 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75496.1) 1.76
72 249037_at AT5G44130 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR) -0.86
73 249035_at AT5G44190 GLK2 (GOLDEN2-LIKE 2); DNA binding / transcription factor -0.83
74 249052_at AT5G44420 PDF1.2 (Low-molecular-weight cysteine-rich 77) 1.77
75 248978_at AT5G45070 ATPP2-A8 (Phloem protein 2-A8); transmembrane receptor 0.96
76 248910_at AT5G45820 CIPK20 (CBL-INTERACTING PROTEIN KINASE 20); kinase -1.14
77 248916_at AT5G45840 leucine-rich repeat transmembrane protein kinase, putative 0.78
78 248448_at AT5G51190 AP2 domain-containing transcription factor, putative -1.31
79 248372_at AT5G51850 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17701.1) 1.43
80 247765_at AT5G58860 CYP86A1 (cytochrome P450, family 86, subfamily A, polypeptide 1); oxygen binding 0.99
81 247585_at AT5G60680 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21845.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) -1.03
82 247478_at AT5G62360 invertase/pectin methylesterase inhibitor family protein 1.29
83 247377_at AT5G63180 pectate lyase family protein -0.87
84 247280_at AT5G64260 phosphate-responsive protein, putative -0.89