marker gene list
Mutant arf19-1 (IAA)
Mutant iaa5_6_19
・・・up requlated genes
・・・down regulated genes
probeID AGICode Annotation gene
expression
1 259445_at AT1G02400 ATGA2OX6/DTA1 (GIBBERELLIN 2-OXIDASE 6); gibberellin 2-beta-dioxygenase -1.30
2 264652_at AT1G08920 sugar transporter, putative 0.93
3 264516_at AT1G10090 similar to RXW8 [Arabidopsis thaliana] (TAIR:AT1G58520.1); similar to hypothetical protein OsI_012954 [Oryza sativa (indica cultivar-group)] (GB:EAY91721.1); similar to hypothetical protein OsJ_011922 [Oryza sativa (japonica cultivar-group)] (GB:EAZ28439.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61522.1); contains InterPro domain Protein of unknown function DUF221; (InterPro:IPR003864) 0.60
4 264466_at AT1G10380 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G17350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40998.1); contains domain PROKAR_LIPOPROTEIN (PS51257) 0.60
5 263211_at AT1G10460 GLP7 (GERMIN-LIKE PROTEIN 7); manganese ion binding / metal ion binding / nutrient reservoir -1.00
6 262452_at AT1G11210 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G11220.1); similar to cotton fiber expressed protein 1 [Gossypium hirsutum] (GB:AAC33276.1); contains InterPro domain Protein of unknown function DUF761, plant (InterPro:IPR008480) 0.66
7 264347_at AT1G12040 LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1); protein binding / structural constituent of cell wall 0.84
8 256010_at AT1G19220 ARF19 (AUXIN RESPONSE FACTOR 11); transcription factor -4.87
9 260877_at AT1G21500 similar to hypothetical protein OsI_030994 [Oryza sativa (indica cultivar-group)] (GB:EAZ09762.1); similar to Os09g0517000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063677.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33829.1) -0.87
10 262491_at AT1G21650 ATP binding 0.53
11 261647_at AT1G27740 basic helix-loop-helix (bHLH) family protein 1.09
12 261470_at AT1G28370 ATERF11/ERF11 (ERF domain protein 11); DNA binding / transcription factor/ transcription repressor -1.53
13 265159_at AT1G31060 unknown protein 1.06
14 259576_at AT1G35330 zinc finger (C3HC4-type RING finger) family protein 0.64
15 262264_at AT1G42470 patched family protein 0.76
16 262388_at AT1G49320 BURP domain-containing protein 0.51
17 260614_at AT1G53390 ATPase, coupled to transmembrane movement of substances -1.42
18 264186_at AT1G54570 esterase/lipase/thioesterase family protein 0.76
19 260014_at AT1G68010 HPR (HYDROXYPYRUVATE REDUCTASE); glycerate dehydrogenase/ poly(U) binding -0.92
20 260037_at AT1G68840 RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE); DNA binding / transcription factor -0.83
21 259751_at AT1G71030 ATMYBL2 (Arabidopsis myb-like 2); DNA binding / transcription factor -0.89
22 259801_at AT1G72230 plastocyanin-like domain-containing protein 0.64
23 259927_at AT1G75100 JAC1 (J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1); heat shock protein binding -1.41
24 264102_at AT1G79270 ECT8 (evolutionarily conserved C-terminal region 8) 0.54
25 261393_at AT1G79580 ANAC033; transcription factor -0.84
26 262045_at AT1G80240 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44183.1); contains InterPro domain Protein of unknown function DUF642 (InterPro:IPR006946) -0.81
27 260287_at AT1G80440 kelch repeat-containing F-box family protein -0.95
28 264618_at AT2G17680 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22785.1); contains InterPro domain Protein of unknown function DUF241, plant (InterPro:IPR004320) -1.47
29 264788_at AT2G17880 DNAJ heat shock protein, putative -1.27
30 266019_at AT2G18750 calmodulin-binding protein 0.55
31 263998_at AT2G22510 hydroxyproline-rich glycoprotein family protein 0.72
32 267250_at AT2G23060 GCN5-related N-acetyltransferase (GNAT) family protein -1.50
33 264404_at AT2G25160 CYP82F1 (cytochrome P450, family 82, subfamily F, polypeptide 1); oxygen binding 1.64
34 266209_at AT2G27550 ATC (ARABIDOPSIS THALIANA CENTRORADIALIS); phosphatidylethanolamine binding 0.56
35 265680_at AT2G32150 haloacid dehalogenase-like hydrolase family protein -0.82
36 255794_at AT2G33480 ANAC041 (Arabidopsis NAC domain containing protein 41); transcription factor 0.65
37 267005_at AT2G34460 flavin reductase-related -0.92
38 266908_at AT2G34650 PID (PINOID); kinase -0.81
39 266637_at AT2G35600 BRXL1 (BREVIS RADIX like 1) 0.72
40 263935_at AT2G35930 U-box domain-containing protein -1.44
41 263912_at AT2G36390 SBE2.1 (STARCH BRANCHING ENZYME 2.1); 1,4-alpha-glucan branching enzyme 0.63
42 265954_at AT2G37260 TTG2 (TRANSPARENT TESTA GLABRA 2); transcription factor 1.49
43 266191_at AT2G39040 peroxidase, putative 1.49
44 267357_at AT2G40000 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41329.1); contains InterPro domain Hs1pro-1, C-terminal (InterPro:IPR009743); contains InterPro domain Hs1pro-1, N-terminal (InterPro:IPR009869) -1.08
45 265722_at AT2G40100 LHCB4.3 (LIGHT HARVESTING COMPLEX PSII); chlorophyll binding -0.81
46 266368_at AT2G41380 embryo-abundant protein-related -0.91
47 245113_at AT2G41660 MIZ1 (MIZU-KUSSEI 1) 0.62
48 260492_at AT2G41850 PGAZAT (POLYGALACTURONASE ABSCISSION ZONE A. THALIANA); polygalacturonase -1.58
49 266765_at AT2G46860 ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3); inorganic diphosphatase/ pyrophosphatase 0.82
50 263320_at AT2G47180 ATGOLS1 (ARABIDOPSIS THALIANA GALACTINOL SYNTHASE 1); transferase, transferring hexosyl groups -0.92
51 245172_at AT2G47540 pollen Ole e 1 allergen and extensin family protein 0.86
52 245151_at AT2G47550 pectinesterase family protein -1.08
53 259275_at AT3G01060 similar to unnamed protein product [Vitis vinifera] (GB:CAO15045.1); similar to unknown [Brassica rapa] (GB:ABC41272.1) -0.97
54 258497_at AT3G02380 COL2 (CONSTANS-LIKE 2); transcription factor/ zinc ion binding -1.08
55 259171_at AT3G03590 SWIB complex BAF60b domain-containing protein -0.91
56 258562_at AT3G05980 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19340.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75979.1) -0.98
57 259015_at AT3G07350 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G25240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38687.1); contains InterPro domain Protein of unknown function DUF506, plant (InterPro:IPR006502) -1.04
58 259244_at AT3G07650 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding 2.04
59 258919_at AT3G10525 similar to SIM (SIAMESE) [Arabidopsis thaliana] (TAIR:AT5G04470.1) -0.80
60 256266_at AT3G12320 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75675.1) -0.94
61 256243_at AT3G12500 ATHCHIB (BASIC CHITINASE); chitinase -1.09
62 258209_at AT3G14060 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45609.1) -0.85
63 259380_at AT3G16340 ATPDR1/PDR1 (PLEIOTROPIC DRUG RESISTANCE 1); ATPase, coupled to transmembrane movement of substances 0.61
64 256799_at AT3G18560 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68009.1) -0.95
65 257743_at AT3G27390 Identical to Uncharacterized membrane protein At3g27390 [Arabidopsis Thaliana] (GB:Q8GUM4;GB:Q9LTZ1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G40640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14643.1) 0.56
66 258239_at AT3G27690 LHCB2:4 (Photosystem II light harvesting complex gene 2.3); chlorophyll binding -1.22
67 252786_at AT3G42670 CHR38 (chromatin remodeling 38); ATP binding / DNA binding / helicase 0.54
68 252279_at AT3G49700 ETO3 (ETHYLENE OVERPRODUCING 3); 1-aminocyclopropane-1-carboxylate synthase -1.45
69 252248_at AT3G49750 leucine-rich repeat family protein 0.62
70 252133_at AT3G50900 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66490.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45855.1) -0.89
71 252103_at AT3G51410 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23714.1); contains InterPro domain Protein of unknown function DUF241, plant (InterPro:IPR004320) -0.99
72 251723_at AT3G56230 speckle-type POZ protein-related 0.79
73 251727_at AT3G56290 similar to hypothetical protein [Vitis vinifera] (GB:CAN75527.1) -0.98
74 251688_at AT3G56480 myosin heavy chain-related 0.51
75 251376_at AT3G60630 scarecrow transcription factor family protein -0.90
76 251368_at AT3G61380 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45900.1); similar to {, related [Medicago truncatula] (GB:ABD32828.1); contains domain PTHR21726:SF4 (PTHR21726:SF4); contains domain PTHR21726 (PTHR21726) 0.54
77 255331_at AT4G04330 similar to unnamed protein product [Vitis vinifera] (GB:CAO69665.1) 0.68
78 255005_at AT4G09990 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G33800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16316.1); contains InterPro domain Protein of unknown function DUF579, plant (InterPro:IPR006514) 0.51
79 254809_at AT4G12410 auxin-responsive family protein -1.23
80 245540_at AT4G15230 ATPDR2/PDR2 (PLEIOTROPIC DRUG RESISTANCE 2); ATPase, coupled to transmembrane movement of substances 0.67
81 245416_at AT4G17350 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47440.1); similar to hypothetical protein 31.t00035 [Brassica oleracea] (GB:ABD65121.1); contains InterPro domain Pleckstrin-like, plant (InterPro:IPR013666); contains InterPro domain Protein of unknown function DUF828, plant (InterPro:IPR008546); contains InterPro domain Pleckstrin-like (InterPro:IPR001849) -1.53
82 254606_at AT4G19030 NLM1 (NOD26-like intrinsic protein 1;1); water channel 1.02
83 254459_at AT4G21200 ATGA2OX8 (GIBBERELLIN 2-OXIDASE 8); gibberellin 2-beta-dioxygenase -1.67
84 253910_at AT4G27290 S-locus protein kinase, putative -0.82
85 253791_at AT4G28640 IAA11 (indoleacetic acid-induced protein 11); transcription factor -1.10
86 253620_at AT4G30520 leucine-rich repeat family protein / protein kinase family protein 0.52
87 253515_at AT4G31320 auxin-responsive protein, putative / small auxin up RNA (SAUR_C) 1.26
88 253309_at AT4G33790 acyl CoA reductase, putative 0.76
89 253197_at AT4G35250 vestitone reductase-related -0.96
90 253125_at AT4G36040 DNAJ heat shock N-terminal domain-containing protein (J11) -0.95
91 253047_at AT4G37295 unknown protein -0.88
92 253064_at AT4G37730 ATBZIP7 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 7); DNA binding / transcription factor 0.65
93 253070_at AT4G37850 basic helix-loop-helix (bHLH) family protein 0.71
94 250987_at AT5G02860 pentatricopeptide (PPR) repeat-containing protein 0.88
95 250802_at AT5G04970 pectinesterase, putative -0.85
96 250498_at AT5G09660 PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2); malate dehydrogenase -0.95
97 249992_at AT5G18560 PUCHI; DNA binding / transcription factor -1.31
98 245967_at AT5G19800 hydroxyproline-rich glycoprotein family protein 0.99
99 249939_at AT5G22430 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G27385.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68427.1) -1.33
100 249459_at AT5G39580 peroxidase, putative -0.88
101 249436_at AT5G39980 pentatricopeptide (PPR) repeat-containing protein 1.00
102 249202_at AT5G42580 CYP705A12 (cytochrome P450, family 705, subfamily A, polypeptide 12); oxygen binding 1.20
103 249174_at AT5G42900 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75496.1) 1.51
104 248727_at AT5G47990 CYP705A5 (cytochrome P450, family 705, subfamily A, polypeptide 5); oxygen binding 0.75
105 248728_at AT5G48000 CYP708A2 (cytochrome P450, family 708, subfamily A, polypeptide 2); oxygen binding 0.94
106 248499_at AT5G50400 ATPAP27/PAP27 (purple acid phosphatase 27); acid phosphatase/ protein serine/threonine phosphatase 0.52
107 247869_at AT5G57520 ZFP2 (ZINC FINGER PROTEIN 2); nucleic acid binding / transcription factor/ zinc ion binding -2.98
108 247867_at AT5G57630 CIPK21 (CBL-INTERACTING PROTEIN KINASE 21); kinase 0.64
109 247668_at AT5G60100 APRR3 (PSEUDO-RESPONSE REGULATOR 3); transcription regulator 0.81
110 247385_at AT5G63420 EMB2746 (EMBRYO DEFECTIVE 2746); catalytic 1.06
111 247047_at AT5G66650 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G23790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22909.1); contains InterPro domain Protein of unknown function DUF607 (InterPro:IPR006769) -1.29
112 244966_at ATCG00600 Cytochrome b6-f complex, subunit V. Disruption of homologous gene in Chlamydomonas results in disruption of cytochrome b6-f complex. 1.75
113 244982_at ATCG00780 encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex 1.04
114 244937_at ATCG01110 Encodes the 49KDa plastid NAD(P)H dehydrogenase subunit H protein. Its transcription is regulated by an ndhF-specific plastid sigma factor, SIG4. 1.70